The largest database of trusted experimental protocols

22 protocols using β mercaptoethanol

1

Authentication and Characterization of Retinoblastoma Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human RB cell line RB-355, established and first described by Griegel et al (1990) (8 (link)), and formerly donated by K. Heise, was kindly provided by Dr H. Stephan. The RB cell lines Y-79 (9 (link)) and WERI-Rb1 (10 (link)), originally purchased from the Leibniz Institute DSMZ (German Collection of Microorganisms and Cell Cultures), were likewise kindly provided by Dr H. Stephan. All RB cell lines were last tested and authenticated in September 2015. Mutation analyses were conducted using an MLPA kit (SALSA MLPA kit P047 RB1; MRC-Holland, Amsterdam, The Netherlands) and reactions were performed according to the manufacturer's instructions. Additional sequencing of the RB1 gene was performed for all RB cell lines. However, most recent STR analyses (March 2017) confirmed the authenticity of the cell lines.
The cell lines were cultivated as suspension cultures in Dulbecco's modified Eagle's medium (DMEM) with 15% fetal bovine serum (FBS) (both from PAN-Biotech GmbH, Aidenbach, Germany), 100 U penicillin/ml and 100 µg streptomycin/ml, 4 mM L-glutamine (both from Gibco, Karlsruhe, Germany), 50 µM β-mercaptoethanol (Carl Roth, Karlsruhe, Germany) and 10 µg insulin/ml (PAN-Biotech) at 37°C, 10% CO2 and 95% humidity. No approval from an Ethics Committee was required for work with the human cell lines.
+ Open protocol
+ Expand
2

Proliferation Assay for T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Untouched CD4+ and CD8+ T cells derived from naïve mice or nylon wool-enriched T cells [17 (link)] were resuspended in medium (IMDM supplemented with 5% FCS (PAA, Cölbe, Germany), 2 mM L-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin (all from Sigma-Aldrich, Deisenhofen, Germany), and 50 μM β-mercaptoethanol (Carl Roth, Karlsruhe, Germany)) at a density of 5 × 104/100 μl and were seeded on 96-well tissue-culture plates (Corning, Cambridge, MA). In some experiments, T cells were serially diluted in triplicates. T cell populations were polyclonally stimulated with plate-bound anti-CD3- (1 μg/ml) and anti-CD28- (2 μg/ml) specific antibodies (both from Affymetrix/eBioscience, San Diego, CA) for 96 h. In order to assess the proliferation of T cells, 3H thymidine (0.5 μCi/well) was applied for the last 16-18 h of the incubation time. Then, cells were harvested onto glass fiber filters, and retained radioactivity was measured in a liquid scintillation counter (1450 MicroBeta TriLux, LKB Wallac, Turku, Finland).
+ Open protocol
+ Expand
3

Eμ-Myc Lymphoma Cell Culture and Decitabine Treatment

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cell culture adapted Eμ-Myc lymphoma cell clone 152M was maintained in RPMI 1640 medium (Sigma-Aldrich, Taufkirchen, Germany) supplemented with 10% (v/v) fetal calf serum (FCS), 50 µM β-mercaptoethanol (Carl Roth, Darmstadt, Germany), 10 mM HEPES and 100 units/mL penicillin and 0.1 mg/mL streptomycin (both Sigma). Cells were cultured under humidified atmosphere at 5% CO2 and 37 °C. For inhibition of DNA methyltransferases, cells were treated with 0.1, 0.5, and 1.0 µM Decitabine (MedChemExpress, Monomouth Junction, NJ, USA) for 48 h. Cell viability was monitored by Trypan Blue (Sigma-Aldrich, Taufkirchen, Germany) staining.
+ Open protocol
+ Expand
4

NHBE Cell Culture and Stimulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
NHBE culture was performed as previously described (40 (link)). Briefly, primary NHBEs (Lonza, Basel, Switzerland) of four genetically independent donors were grown as monolayers in 100% humidity and 5% CO2 at 37 °C in serum-free defined growth media (BEGM, Lonza). NHBEs (passage 3) were used at ∼80% confluence in 6-well plates. To avoid gene expression changes or influences by growth factors in the BEGM medium, cells were rested in basal medium (BEBM, Lonza) for 12 h, then stimulated with HDM extract at a final concentration of 40µg/mL (CITEQ), recombinant human IL-4 at 50 ng/ml (R&D Systems, Minneapolis, MN, USA) for 6 h. When indicated, cells were pretreated for two h prior to stimulation with the AhR inhibitor CH-223191 (Sigma-Aldrich) at a concentration of 1µM/mL. For RNA analysis, harvested cells were lysed in RLT buffer (Qiagen, Hilden, Germany) containing 1% β-mercaptoethanol (Roth, Karlsruhe, Germany) directly in the cell culture well.
+ Open protocol
+ Expand
5

Culturing Liver Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liver cell lines Huh7 and Sk-Hep-1 (kindly provided by P.
Knolle, Technische Universität München) were grown in DMEM (Sigma-Aldrich)
supplemented with 10% Fetal calf serum (FCS, Sigma-Aldrich) and 1%
penicillin-streptomycin (Lonza). Sk-Hep1 cells were additionally maintained
in 40 μM β-mercaptoethanol (Carl Roth). LX-2 cells were
provided by SL. Friedman (Icahn School of Medicine) and cultured in DMEM
high glucose (Life Technologies) supplemented with 2% FCS, 1%
penicillin-streptomycin. All cells were grown at 37 °C
under 5% CO2.
+ Open protocol
+ Expand
6

Isolation and Stimulation of PBMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Peripheral blood mononuclear cells (PBMCs) were isolated by Ficoll density gradient centrifugation (density: 1.077 g/ml; PanBiotech) and washed twice with DPBS (Gibco). Cells were resuspended in FBS (Gibco) containing 10% DMSO (Merck) and gradually frozen to -180 °C. For cell culture experiments, PBMCs were thawed, washed twice with DPBS, resuspended in B cell medium consisting of IMDM with L-Glutamine and 25 mM HEPES supplemented with 10% FBS, 1% Penicillin/Streptomycin, 1 mM Sodium Pyruvate, 1% MEM non-essential aminoacids (all from Gibco) and 0.055 mM β-Mercaptoethanol (Carl Roth) and seeded at a concentration of 0.25 × 106 cells/well into 96-well round bottom plates. Cells were rested for 2 h at 37 °C and 5% CO2 in a humified incubation chamber, if not differently described.
To analyze the effect of D1-like receptor stimulation on cytokine release, 0.25 × 106 PBMCs were seeded per well of a 96-well round bottom plate and stimulated with CpG ODN 2006 (0.35 μM, InvivoGen) with or without indicated concentrations of the agonists A68930 (Tocris) and SKF38393 (Tocris) for 24 h. Afterwards, cells were centrifuged and supernatants were frozen at − 80 °C until analysis.
+ Open protocol
+ Expand
7

Culturing Liver Cell Lines Huh7 and Sk-Hep1

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liver cell lines Huh7 and Sk-Hep1 (kindly provided by P. Knolle, Technische Universität München) were grown in DMEM (Sigma-Aldrich) supplemented with 10% FCS (Sigma-Aldrich) and 1% penicillin–streptomycin (Lonza). Sk-Hep1 cells were additionally maintained in 40 μM β-mercaptoethanol (Carl Roth). LX-2 cells were provided by SL. Friedman (Icahn School of Medicine, New York) and cultured in DMEM high glucose (Life Technologies) supplemented with 2% FCS, 1% penicillin–streptomycin. All cells were grown at 37°C under 5% CO2.
+ Open protocol
+ Expand
8

HCMV-specific T Cell Isolation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Buffy coats were kindly provided by the Institute for Clinical and Experimental Transfusion Medicine at the University Hospital of Tübingen after obtaining written informed consent in accordance with the Declaration of Helsinki and applicable laws and regulations. This has been approved by the Ethik-Kommission an der Medizinischen Fakultät der Eberhard-Karls-Universität und am Universitätsklinikum Tübingen (Project No. 507/2017BO1). Two-digit HLA-A and -B typing and CMV status were provided by Transfusion Medicine. Thereafter, blood samples were encoded by four-digit numbers. Peripheral blood mononuclear cells (PBMCs) were isolated from healthy HCMV-seropositive blood donors by Ficoll-Hypaque density gradient centrifugation. Cells were frozen at −80°C in FCS and 10% DMSO. After thawing, cells were rested overnight before stimulation. Culture conditions were 7.5% CO2 and 37°C in humidified incubators in IMDM (Thermo Fisher Scientific; 12440) supplemented with 5% heat-inactivated pooled human plasma (isolated from healthy blood donors), 100 U/ml penicillin, 100 µg/ml streptomycin, 25 µg/ml gentamicin (Life Technologies), and 50 µM β-mercaptoethanol (Carl Roth).
+ Open protocol
+ Expand
9

Murine Blood and Immune Cell Isolation

Check if the same lab product or an alternative is used in the 5 most similar protocols
After mice were sacrificed by CO2 inhalation, whole venous blood was collected and allowed to clot at room temperature. The clot was removed by centrifugation and serum was subsequently stored at −20 °C. Spleen and lymph nodes were retrieved, disintegrated mechanically and filtered through a 70-μm nylon Falcon® cell strainer (Corning Life Sciences, Amsterdam, The Netherlands). After washing the cells with PBS (PromoCell, Heidelberg, Germany) lysis of erythrocytes was performed for SPCs by suspending the pelleted SPCs in 0.2 % NaCl for 30 s followed by two wash steps with culture medium, consisting of RPMI 1640 (PromoCell) supplemented with 10 % FCS (Lonza, Cologne, Germany), 100 U/mL Penicillin/100 μg/mL Streptomycin (PAA, Coelbe, Germany), 1 % l-glutamine (PAA) and 50 μM β-mercaptoethanol (Carl Roth, Karlsruhe, Germany).
+ Open protocol
+ Expand
10

Modulation of AMPK Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
M199 and Eagle’s minimum essential medium (EMEM) were purchased from Lonza (Basel, Switzerland). Fetal calf serum (FCS), human serum, endothelial cell supplement (ECGS), trypsin-EDTA, non-essential amino acids, L-glutamine, anhydrous dimethylsulfoxide (DMSO), Akt inhibitor VIII (Akt VIII), Torin-2, and Hoechst 33342 were from Sigma (Taufkirchen, Germany). bovine serum albumin-C (BSA-C) was obtained from Aurion (Wageningen, The Netherlands) and goat serum from Cell Signaling Technology (Frankfurt, Germany). EDTA-free protease inhibitor cocktail was purchased from Roche Diagnostics (Mannheim, Germany). β-Mercaptoethanol, dithiothreitol (DTT), EDTA, bovine serum albumin, Tween-20, and Triton X-100 were obtained from Carl Roth GmbH (Karlsruhe, Germany). Fluoromount-G was from Southern Biotech (Birmingham, AL, US). MK-8722 was purchased from Aobious (Gloucester, MA, USA). The siRNAs against AMPKα1 or AMPKα2, ACC1, and non-targeting control-siRNA were SMARTpool-siRNAs obtained from Horizon, Dharmacon RNAi, and Gene Expression (Lafayette, CO, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!