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5 protocols using bx3 microscope

1

Quantifying Dopaminergic Fiber Density

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The relative optical density of TH-positive fibers in the putamen was quantified using computer-assisted image analysis techniques (ImageJ 1.53a; National Institutes of Health, USA) as previously described (51 (link)). Briefly, images were captured with an Olympus BX3 microscope and converted to black and white 8-bit monochrome. Digital images were captured under the same exposure settings for all experimental cases. Seven axial consecutive sections covering the whole dorso-ventral axis, regularly spaced at intervals of 1600 μm, were examined for each monkey. The optical density of a nonstained region in the same section was subtracted as background. The percent reduction of TH-positive fiber density was determined as percent loss in the MPTP-treated monkey compared with the value for one control monkey in the same region.
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2

Hematoxylin and Eosin Staining of Trigeminal Ganglion

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Hematoxylin and Eosin (H&E) staining was conducted on frozen TG tissue sections (5μm) to visualize ganglion structure. Briefly, slides were incubated in Harris’ Hematoxylin for 5 min, rinsed in H20 for 5 min and differentiated in acid alcohol (1% HCl in 70% ethanol) for 10 sec. Next, sections were rinsed with distilled H20 (dH20) for 5 min, incubated in ammonia water (0.25% ammonia hydroxide in dH20) for 3 min and rinsed with dH20 2X’s (5 min). Sections were dipped in alcoholic Eosin for 10 sec, rinsed with dH20 2X’s (5min), dehydrated in ethanol and then mounted onto coverslips (Permount, Fisher Scientifc; Hampton, NH).
Protein expression was also determined in frozen TG sections using an antibody directed against glial fibrillary associated protein (GFAP) (Z033429-2, Agilent Technologies, Santa Clara, CA). A standard immunohistochemical avidin-biotin-peroxidase complex technique (Vectastain Elite ABC kit, PK-6100, Vector Laboratories, Burlingame, CA) was used to visualize protein expression using 0.02% of 3-diaminobenzidine tetrahydrochloride. Sections were then counterstained with methyl green. Images were acquired with an Olympus BX3 microscope equipped with a DP73 17.28 megapixel digital color camera using a 20X objective (Olympus Life Science; Center Valley, PA).
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3

Immunohistochemical Analysis of Pain-Related Proteins

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Protein expression was determined in frozen TG tissue sections using antibodies directed against TRPV1, CGRP, (GP14100; RA24112, Neuromics, Edina, MN), ET-1, ET-A and SP (ab2786, ab117521; ab14184, Abcam, Cambridge, MA). Following primary antibody incubation, tissue sections were incubated with the appropriate Alexa-Fluor 568 and 488 secondary antibodies (Life Technologies; Grand Island, NY). Sections receiving only secondary antibody were included as negative controls. Immunofluorescence images were acquired with an Olympus BX3 microscope equipped with a DP73 17.28 megapixel digital color camera using a 20X objective (Olympus Life Science; Center Valley, PA).
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Nanoshape Characterization Techniques

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For the characterization of the nanoshapes, TEM was performed using an FEI Tecnai TF20 TEM (200 kV), UV-visible and CD spectrophotometry used an OLIS 17 spectrophotometer (Olis), and a TGA Q500 (TA Instruments). Polarized light optical microscopy used an Olympus BX3 microscope equipped with an LTS 420E heating/cooling stage from Linkam Scientific Instruments.
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5

iPS-RPE Cells Immunocytochemistry Protocol

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iPS-RPE cells were cultured on fibronectin-coated inserts (Nunc, Rochester, NY). The cells were washed with PBS and fixed at room temperature in 4% paraformaldehyde for 10 min. Immunocytochemistry was performed using standard procedures with anti-β-catenin or α-SMA antibodies (ab2365, ab21027; Abcam, Cambridge, MA) and probed with the appropriate Alexa Fluor 568 and 488 secondary antibodies (Life Technologies). Bright field images were acquired with an Olympus CK2 microscope using the 20 × objective. Immunofluorescence images were acquired with an Olympus BX3 microscope equipped with a DP73 17.28 megapixel digital color camera using a 60 × oil immersion objective (Olympus Life Science, Center Valley, PA).
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