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5 protocols using anti fibronectin antibody

1

Immunohistochemical Analysis of Endometriosis Lesions

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Immunohistochemical localization of α-SMA and fibronectin was performed in endometriosis lesions as already described [68 (link),69 (link)]. The sections were incubated overnight with primary antibodies: anti-α-SMA antibody (Santa Cruz Biotechnology, CGA7) or anti-fibronectin antibody (Santa Cruz Biotechnology, sc-271098). All sections were washed with PBS and then treated as previously reported [70 (link),71 (link)]. The stained sections were observed using a Leica DM6 microscope following a typical procedure [72 (link)]. The histogram profile is related to the positive pixel intensity value obtained [73 (link)].
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2

Histological Analysis of Kidney Injury

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Glomerulosclerotic scores were evaluated by a semiquantitative method in 20 glomeruli per animal using 2-μm kidney sections stained with periodic acid-Schiff (PAS) stain61 (link). Assessment of tubulointerstitial injury was evaluated in the cortical regions using PAS staining and a semiquantitative scoring system evaluating interstitial fibrosis, inflammation, tubular atrophy, tubular dilation, debris accumulation, and cast formation in 20 tubulointerstitial areas per animal. A score of (0) for normal tubulointerstitium, (1) for injury in less than 25%, (2) for injury up to 50%, and (3) for injury in more than 50% of the biopsy specimen, as described in the previous study33 (link). Immunohistochemistry was performed with a rabbit polyclonal anti-HIF-1α antibody (1:200) (Novus Biologicals) and mouse monoclonal anti-fibronectin antibody (1:500) (Santa Cruz Biotechnology, Santa Cruz, CA, USA) as previously described33 (link). The picrosirius red stain was performed by Picrosirius Red Stain Kit (Polysciences, Warrington, PA, USA) and evaluated by optical microscope and polarizing microscope. The picrosirius red-positive area was measured using Image J by identifying the percentage of interstitial collagen positive region at x 32 magnification in five randomly selected regions62 (link). Morphometry was conducted in a blinded manner by two experienced nephrologists.
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Glioma Tumor Tissue Western Blot Analysis

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Glioma tumor tissue and adjacent normal tissue were washed with ice-cold PBS, homogenized on ice, and lysed by protein lysate (Pierce). After centrifugation, the protein concentration was measured by BCA protein assay kit (Pierce). Fifty micrograms of lysate was used for western blot. Briefly, whole cell protein extracts were separated on 10% SDS-PAGE and electroblotted onto a nitrocellulose membrane (Amersham). The blocked membrane was incubated first with anti-DKC1 polyclonal mouse antibody (Santa Cruz) or anti-beta-actin antibody (Sigma) and then with rabbit anti-mouse antibody conjugated with horseradish peroxidase (Sigma). The signal was detected using BM Blue POD Substrate (Roche). The following antibodies were used: anti-CTNNBIP1 antibody (1:200; Santa Cruz), anti-β-Catenin (t-β-Catenin) antibody (1:200; Product code: ab47426; Abcam), anti-β-Catenin (phospho T41 + S45, p-β-Catenin) antibody (1:200; Product code: ab81305; Abcam), anti-α-SMA antibody (1:200; Sigma, St. Louis, MO), and anti-fibronectin antibody (1:200; Santa Cruz). Anti-β-actin antibody (1:1000; Sigma) was used as a loading control.
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4

Antibody Immunoblotting for EMT Markers

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The anti-fibronectin antibody was obtained from Santa Cruz Biotechnology, Inc.,(Santa Cruz, CA, USA). Antibodies against vimentin, E-cadherin and N-cadherin were purchased from Abcam (Cambridge, UK). Antibodies against SNAIL and GAPDH were purchased from BD Biosciences (Franklin Lakes, NJ, USA). Horseradish peroxidase (HRP)-conjugated goat anti-mouse and anti-rabbit immunoglobulin G (IgG) were purchased from Santa Cruz Biotechnology, Inc.
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5

Immunoprecipitation Assay for Scleroderma Lung Fibroblasts

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Cells were collected and analyzed by immunoblotting as previously described (36 (link)). Anti-α-SMA and anti-β-actin antibodies were obtained from Sigma-Aldrich (St. Louis, MO); anti-type I collagen antibody was purchased from SouthernBiotech (Birmingham, AL); anti-fibronectin antibody was obtained from Santa Cruz Biotechnology (Santa Cruz, CA) and anti-LMCD1 antibody was purchased from Novus Biologicals (Centennial, CO). For immunoprecipitation assay, scleroderma lung fibroblasts were grown to confluence on 100mm plates, kept in serum-free DMEM 4 hours, incubated with TGFβ for 24 hours, washed with ice cold PBS, collected with 1ml of ice-cold RIPA buffer, and cleared by microcentrifugation at 4°C. Next, 2μg of anti-SRF antibody (Sigma) was added, and the samples were rotated for 90min at 4°C. Immune complexes were isolated on protein G-sepharose beads (Amersham Pharmacia Biotech, Piscataway, NJ), washed with RIPA buffer, resolved by gel electrophoresis, and immunoblotted with anti-LMCD1 antibody.
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