The largest database of trusted experimental protocols

8 protocols using rat anti mac 2

1

Histological Analysis of Aortic Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aortic tissue was fixed in 4% buffered formaldehyde for 24 hours, transferred to 70% ethanol, and then embedded in paraffin. Cross-sectional samples were prepared using Verhoeff-van Gieson trichrome to stain for collagen and elastin. Two independent blinded reviewers scored elastin breaks using a previously published scale.9 (link) Immunohistochemical staining was also performed for anti-mouse α smooth muscle actin (α-SMA) (1:1000; Santa Cruz Biotechnology, Santa Cruz, CA, USA), macrophages (anti-rat Mac-2; 1:10,000, Cedarlane Laboratories, Burlington, ON, Canada), macrophage-specific (Galectin-3 ligand; 1:200, Abcam, and CD68 ligand; 1:200, Abcam), M1 macrophages (IL-1β ligand; 1:200, Abcam), M2 macrophages (Arginine type 1; 1:200; Abcam), and CD3 for T cells (1:500; Santa CruzBiotechnology). Visualization color development was completed using alkaline phosphatase (Dako, Glostrup, Denmark) for α-SMA, and diaminobenzidine for Mac-2, anti-neutrophil, and CD3. ·For elastin grading, 1 corresponded to no degradation, 2= mild degradation, 3 =moderate degradation, and 4= severe degradation. For smooth muscle cell (SMC) grading, 1 corresponded to no SMC loss, 2 = mild SMC loss, 3 = moderate SMC loss, and 4 = severe SMC loss.
+ Open protocol
+ Expand
2

Aortic Tissue Histopathology Evaluation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cross-section samples were prepared using Verhoeff-Van Gieson (VVG) Trichrome to stain for collagen and elastin. Two independent blinded reviewers scored elastin breaks using the following scale: 1=concentric heavy rings of elastin, 2=mild elastolysis, 3=moderate elastolysis, and 4=extensive elastolysis. These scores were averaged and compared. Immunohistochemical staining was also performed for anti-mouse α smooth muscle actin (α-SMA) (1:1000; Santa Cruz Biotechnology, Santa Cruz, CA, USA), macrophages (anti-rat Mac-2; 1:10,000, Cedarlane Laboratories, Burlington, ON, Canada), M1 macrophages (IL-1β ligand; 1:200, Abcam), M2 macrophages (Arginine type 1; 1:200; Abcam), and CD3 for T cells (1:500; Santa Cruz Biotechnology). Visualization color development was completed using alkaline phosphatase (Dako, Glostrup, Denmark) for α-SMA, and diaminobenzidine for Mac-2, anti-neutrophil, and CD3.
Images of the sectioned aortas were acquired and analyzed as previously published.10 (link) In short, images are obtained using AxioCam 4.6 software with 4x objective and an AxioCam MRc camera (Carl Zeiss GmBh). For quantification, the integrated optical density of the positive staining area in the cross sectional image of the aortic tissue sample was selected and measured using Image-Pro Plus 7.0 (Media Cybernetics, Bethesda, MD, USA).
+ Open protocol
+ Expand
3

Immunohistochemical Markers for Cellular Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies (supplier; dilutions) used in this study were as follows: rabbit anti-Calbindin (Swant; 1∶10,000); goat anti-ChAT (Millipore; 1∶500); rabbit anti-GFAP (DAKO; 1∶8,000); mouse anti-GM130 (BD Transduction; 1∶100); rabbit anti-Hsp25 (Enzo; 1∶8,000); rabbit anti-Iba-1 (Wako; 1∶5,000); rat anti-Ki67 (DAKO; 1∶200); rat anti-Mac2 (Cedarlane;1∶2,000); mouse anti-NeuN (Millipore; 1∶1,000); rabbit anti-p53 (Leica; 1∶1,000). For avidin– biotin–peroxidase immunocytochemistry biotinylated secondary antibodies from Vector Laboratories, diluted 1∶200 were used. FITC-, Cy3-, and Cy5-conjugated secondary antibodies raised in donkey (Jackson ImmunoResearch) diluted at 1∶200 were used for confocal immunofluorescence.
+ Open protocol
+ Expand
4

Investigating Adriamycin-Induced Kidney Injury

Check if the same lab product or an alternative is used in the 5 most similar protocols
Adriamycin was obtained from Sigma Aldrich (St. Luis, MO). FR167653, p38α MAPK inhibitor, was kindly provided by Astellas Pharma Inc. (Tokyo, Japan). Primary antibodies used for immunohistochemical studies and Western blotting were mouse anti-NPR-C (1:100, sc-515449; SantaCruz, Dallas, TX), goat anti-nephrin (1:100, AF3159; R&D Systems, Minneapolis, MN), rabbit anti-monocyte chemotactic protein-1 (1:100, ab25124; Abcam, Cambridge, UK), rabbit anti-phospho-p38 MAPK (1:1000, #9211; Cell Signaling Technology, Boston, MA), mouse anti-desmin (1:150, M0760; DAKO, Tokyo, Japan), mouse anti-β actin (1:1000, A5411; Sigma-Aldrich), and rat anti-MAC-2 (1:100, CL8942F; Cedarlane, CA).
+ Open protocol
+ Expand
5

Glomerular Pathology Quantification in Diabetic Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
Kidneys and other organs were obtained from WT and BTBR ob/ob mice after 14 weeks of drug therapy. Tissue sections were fixed, embedded, immunostained and analyzed as previously described (17 (link)), as were glomerular mesangial expansion and matrix accumulation. Briefly, the mesangial area occupied by silver methenamine stained matrix was quantified, as was the total area positive for matrix, by computer image analysis (Image Pro Plus, Media Cybernetics, Rockville, MD), for each glomerular cross-section. Mesangiolysis was determined by assessing the silver methenamine-stained glomeruli and scoring at least 50 glomeruli per section, scored present when lucency and dissolution of the normally compact silver-staining mesangial matrix was present and/or there were dilatation/ballooning of adjacent capillary loops.
Rat anti–Mac-2 (1:5000, Cedarlane, Hornby, Ontario, CA) and rabbit polyclonal anti-p57 (1:3000, Santa Cruz Biotechnology, Santa Cruz CA) were used to visualize glomerular macrophages and podocytes, as previously published (18 (link)). Quantification for Mac-2 and p57 were performed on digital images of immunostained tissues by counting, in a blinded manner, the number of Mac-2-positive cells and p57-positive podocytes per glomerular cross section in 50 glomeruli, per animal.
+ Open protocol
+ Expand
6

Glomerular Pathology Quantification in Diabetic Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
Kidneys and other organs were obtained from WT and BTBR ob/ob mice after 14 weeks of drug therapy. Tissue sections were fixed, embedded, immunostained and analyzed as previously described (17 (link)), as were glomerular mesangial expansion and matrix accumulation. Briefly, the mesangial area occupied by silver methenamine stained matrix was quantified, as was the total area positive for matrix, by computer image analysis (Image Pro Plus, Media Cybernetics, Rockville, MD), for each glomerular cross-section. Mesangiolysis was determined by assessing the silver methenamine-stained glomeruli and scoring at least 50 glomeruli per section, scored present when lucency and dissolution of the normally compact silver-staining mesangial matrix was present and/or there were dilatation/ballooning of adjacent capillary loops.
Rat anti–Mac-2 (1:5000, Cedarlane, Hornby, Ontario, CA) and rabbit polyclonal anti-p57 (1:3000, Santa Cruz Biotechnology, Santa Cruz CA) were used to visualize glomerular macrophages and podocytes, as previously published (18 (link)). Quantification for Mac-2 and p57 were performed on digital images of immunostained tissues by counting, in a blinded manner, the number of Mac-2-positive cells and p57-positive podocytes per glomerular cross section in 50 glomeruli, per animal.
+ Open protocol
+ Expand
7

Comprehensive Antibody Characterization for Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies (supplier; dilutions) used in this study are:
Rabbit anti-ATF3 (Santa Cruz; IHC and IF 1:1000), goat-anti-choline acetyltransferase (ChAT, Millipore, 1:500), goat anti-Cholera toxin B subunit (CTB; List Biological laboratories, 1:5000), rabbit-anti-CGRP (Calbiochem, IF, 1:10.000), human-anti EEA1 (gift from Dr. M.J. Fritzler, IF: 1:500 [34 (link)]), mouse-anti GM130 (BD Biosciences, 1:200), rabbit-anti GM130 (antibody M07, gift from Dr. M. Lowe [35 (link)], 1:1000), mouse anti GRASP65 (gift from Dr. M. Lowe [35 (link)], 1:200), rabbit-anti-GRASP-1 (Millipore, 1:500), rat anti-Mac-2 (Cedarlane, 1:2000), mouse-anti p115 (BD Biosciences, 1:500), sheep anti-hSOD1 (Calbiochem; IF, 1:5000), rabbit-anti unfolded SOD1 (USOD, gift from Dr. A. Chakrabartty [36 (link)], 1:1000), rabbit anti-SOD1 exposed dimer interface (SEDI, gift from Dr. J. Robertson [37 (link)], 1:1000), mouse anti-ubiquitin (clone FK2; Affinity BioReagents, Golden, CO; 1:2000, rabbit anti-ubiquitin (DAKO, 1:1000).
Secondary antibodies used for IF or ICC were Alexa-488, -568 or -633- conjugated goat-anti mouse or goat-anti rabbit antibodies from Molecular Probes; or FITC, Cy3 or Cy5 donkey-anti-rabbit, donkey-mouse or donkey-goat antibodies from Jackson Laboratories; all antibodies were used at 1:400. Biotinylated goat-anti-rabbit or anti-mouse IgG (Vector) were used at 1:400.
+ Open protocol
+ Expand
8

Quantifying Protein Expression in Brain Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brain tissue was lysed in lysis buffer (50 mM Tris HCl pH 7.6, 150 mM NaCl, 1% NP-40, 0.5% sodium deoxycholate, and 0.1% sodium dodecyl sulfate (SDS)) supplemented with a protease inhibitor mixture (1:100, Sigma-Aldrich) using a GentleMACS dissociator (Miltenyi Biotec, Bergisch Gladbach, Germany). Following homogenization, samples were centrifuged at 14,000 × gav for 10 min at 4 °C, and the supernatants collected. Protein was quantified using the BCA protein assay reagent. Seventy micrograms of protein in the sample buffer was electrophoresed on a 10% SDS-polyacrylamide gel and transferred to a nitrocellulose membrane. Blots were incubated with the following primary antibodies: rat anti-MAC2 (1:1000, Cedarlane, Ontario, Canada), mouse anti-tubulin (1:5000, Santa Cruz, Dallas, TX, USA), followed by a horseradish peroxidase-conjugated secondary antibody. Bound antibodies were detected using the Westar Chemiluminescent substrate (Cyanagen, Bologna, Italy). Western blots were analyzed by densitometry and values quantified using a ratio of Mac2 to Tubulin.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!