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Irdye 800cw goat anti rabbit igg h l

Manufactured by LI COR
Sourced in United States, Germany

IRDye 800CW goat anti-rabbit IgG (H+L) is a secondary antibody conjugated with the IRDye 800CW fluorescent dye. It is designed for use in near-infrared (NIR) fluorescence detection applications.

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75 protocols using irdye 800cw goat anti rabbit igg h l

1

Western Blot Analysis of ERK1/2 Activation

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Cells were lysed using tissue protein extraction reagent (Thermo, USA) containing phosphatase inhibitor cocktail (1:100, Thermo), protease inhibitor cocktail (1:100, Thermo), and 5 mM EDTA (Thermo); lysates were oscillated and centrifuged (13,000×g, 15 min, 4 °C). The supernatant was collected and stored at − 80 °C. The protein concentrations were determined using the BCA protein assay kit (Thermo). The protein was mixed with 5X SDS-PAGE protein loading buffer (Beyotime, China) and denatured by 100 °C water bath. Then, the samples denatured were electrophoresed in 10% SDS-PAGE and transferred to PVDF membranes using transfer device (Bio-Rad). The membranes were blocked with 5% non-fat milk prepared in TBST for 1 h at 37 °C and then incubated at 4 °C overnight with the primary antibodies: ERK1/2 (1:1000, Cell Signaling Technology, p44/42 MAPK Rabbit mAb, 4695), p-ERK1/2 (1:1000, Cell Signaling Technology, Phospho-p44/42 MAPK (ERK1/2) XP®, Rabbit mAb, 4370), and the internal normalization mouse anti-GAPDH (1:1000, Santa Cruz Biotechnology). Next, the membranes were washed in TBST, incubated with secondary antibody: Goat anti-Rabbit IgG (H + L) IRDye 800CW or Goat anti-Rabbit IgG (H + L) IRDye 800CW (1:20,000; LI-COR) for 1 h at 37 °C. The images were observed with a UVA Bio Imaging System and analyzed with ImageJ software.
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2

Western Blot Analysis of HASM Cell Proteins

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The procedure of Western blot analysis was performed as previously described [5 (link)]. Total protein content was isolated from HASM cells using a protein extraction lysis buffer (Biyuntian, China) in the presence of a protease inhibitor (PMSF, Biyuntian, China). The protein concentration of the cell lysates was quantified using a BCA protein assay kit (Biyuntian, China). An equal amount of protein derived from the different groups was separated on a 10% SDS gel. Following separation, the proteins were transferred to a nitrocellulose membrane (PALL, USA) and the membranes were incubated at room temperature in 5% non-fat milk in TBST. Subsequently, the membranes were incubated with rabbit polyclonal Abs against GAPDH and a-SMA (Immunoway, USA) and rabbit monoclonal Abs against AKT and phosphorylated AKT (Cell Signaling Biotechnology). The following morning, the membranes were incubated with a secondary antibody (goat anti-rabbit IgG H&L IRDye 800CW, Licor, USA) at room temperature for 1 h. The membranes were quantified by densitometry using the Odyssey infrared image system (Licor, USA). GAPDH was used as the control for the normalization of the relative protein expression levels.
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3

Western Blot Immunodetection Protocols

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Anti-HA-tag (rabbit polyclonal, MilliporeSigma, Burlington, MA, USA), anti-FLAG-tag (mouse monoclonal, MilliporeSigma, Burlington, MA, USA), anti-HA-tag (mouse monoclonal, MilliporeSigma, Burlington, MA, USA), anti-HBc (rabbit polyclonal, DAKO, Carpinteria, CA, USA), and anti-HBc (rabbit monoclonal, Gilead Sciences, Inc., Foster City, CA, USA) were used as primary antibodies. As secondary antibodies conjugated with horseradish peroxidase (HRP), we used goat anti-mouse (MilliporeSigma, Burlington, MA, USA) and goat anti-rabbit (MilliporeSigma, Burlington, MA, USA). For visualization, we used a SuperSignal™ West Femto Maximum Sensitivity Substrate (ThermoFisher Scientific, Waltham, MA, USA) and LAS-4000 imager. As secondary antibodies for the LI-COR system, we used goat anti-rabbit IgG (H + L) IRDye 800CW (LI-COR Biosciences, Lincoln, NE, USA) and goat anti-mouse IgG (H + L) IRDye 680RD (LI-COR Biosciences, Lincoln, NE, USA). Western blots were visualized using an LI-COR Odyssey CLx system and the Image Studio Lite Software (LI-COR Biosciences, Lincoln, NE, USA).
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4

Western Blot Analysis of LRP1 in Liver Tissue

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For western blot analysis of LRP1, whole cell lysate extraction was carried out from frozen liver tissue using RIPA lysis buffer (Cell Signaling Technology, Danvers, MA) with Complete Protease Inhibitor Cocktail (Roche, Mannheim, Germany). Protein concentrations were determined using Coomassie Bradford Protein Assay Kit (Thermo Scientific, Waltham, MA) and similar amount of proteins were loaded onto a NuPAGE 4–12% Bis-Tris gel (Thermo Fisher Scientific, Waltham, MA) under reducing conditions. Samples were then blotted onto a nitrocellulose membrane, and detected using Rabbit Monoclonal Anti-LRP1 antibodies (ab92544, Abcam, Cambridge, MA) and Goat Anti-rabbit IgG (H+L) IRDye 800 CW (925–32211, Li-COR, Lincoln, NE). After LRP staining, the membrane was stripped using Li-COR Stripping Buffer (Li-COR, Lincoln, NE) and stained for GAPDH as a loading control (Mouse recombinant Anti-GAPDH, 6C5, Abcam, Cambridge, MA; Goat Anti-mouse IgG (H+L) IRDye 680RD, Li-COR, Lincoln, NE). After densitometry the levels of protein for each dog was adjusted based on GAPDH and normalized to the untreated hemophilia A dog. Uncropped image of Western blot is provided (Source Data Supp Fig. 4).
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5

Immunoblotting and Immunofluorescence Protocols

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For immunoblotting (IB), all primary antibodies are used at a 1:1,000 dilution, unless stated otherwise. Secondary antibodies are used at a 1:10,000 dilution. For immunofluorescence (IF): primary antibodies were diluted 1:100 and secondary antibodies were used 1:1000. The follow primary antibodies were used: mouse anti-SQSTM1/p62 (ab56416, Abcam), rabbit anti-NDP52 (9036, CST), rabbit anti-ATG9A (13509S, CST), mouse anti-GFP (118114460001, Sigma), rabbit anti-BNIP3 (44060S, CST), rabbit anti-BNIP3L/NIX (12396S, CST), anti-V5 Tag (13202, CST), rat anti-tubulin (sc-53030, Santa Cruz Biotechnology), mouse anti-tubulin (3873S, CST), and mouse anti-EMC3/TMEM111 (67205–1-lg, Proteintech). The following secondary antibodies were used for (IB): goat anti-mouse IgG(H+L) IRDye 680LT (926–68020, LI-COR), goat anti-rabbit IgG(H+L) IRDye800CW (926–32211, LI-COR); secondary antibodies (IF): goat anti-rabbit IgG(H+L) Alexa Fluor Plus 647 (A32733, Invitrogen), goat anti-mouse IgG(H+L) Alexa Fluor Plus 647 (A32728, Invitrogen).
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6

Western Blot Analysis of Protein Expression

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Axon or soma were lysed in RIPA buffer (Sigma-Aldrich) containing anti-peptidase cocktail (Roche). Lysates were heated in LDS sample buffer and separated on NuPAGE® Novex® 4–12% Bis-Tris Gels (ThermoFisher). Proteins were transferred to a Odyssey nitrocellulose membrane (LI-COR Biosciences), and membranes were blocked with Odyssey blocking buffer (LI-COR Biosciences) for 1 h. Proteins were detected by overnight incubation at 4 ºC with antibodies against TH, 1:1000 (Cell Signaling Technology Cat# 13106, RRID:AB_2798122) or β-actin, 1:1000 (Cell Signaling Technology Cat# 12620, RRID: AB_2797972) in Odyssey blocking buffer containing 0.2% Tween 20 for either 2 h at room temperature or overnight at 4 °C, followed by incubation with goat anti-rabbit IgG (H+L) IRDye 800CW (LI-COR,Lincoln, cat# 926–32211, RRID: AB_621843 at a 1:5,000 dilution in Odyssey blocking buffer containing 0.2% Tween 20 and 0.1% SDS for 1 h at room temperature. The membrane was washed 3 times with Tris-buffered saline/0.1% Tween 20 (TBS–T) between each incubation step. The membrane was then imaged with the Odyssey Infrared Imaging System (LI-COR Biosciences).
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7

Western Blot Analysis of LRP1 in Liver Tissue

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For western blot analysis of LRP1, whole cell lysate extraction was carried out from frozen liver tissue using RIPA lysis buffer (Cell Signaling Technology, Danvers, MA) with Complete Protease Inhibitor Cocktail (Roche, Mannheim, Germany). Protein concentrations were determined using Coomassie Bradford Protein Assay Kit (Thermo Scientific, Waltham, MA) and similar amount of proteins were loaded onto a NuPAGE 4–12% Bis-Tris gel (Thermo Fisher Scientific, Waltham, MA) under reducing conditions. Samples were then blotted onto a nitrocellulose membrane, and detected using Rabbit Monoclonal Anti-LRP1 antibodies (ab92544, Abcam, Cambridge, MA) and Goat Anti-rabbit IgG (H+L) IRDye 800 CW (925–32211, Li-COR, Lincoln, NE). After LRP staining, the membrane was stripped using Li-COR Stripping Buffer (Li-COR, Lincoln, NE) and stained for GAPDH as a loading control (Mouse recombinant Anti-GAPDH, 6C5, Abcam, Cambridge, MA; Goat Anti-mouse IgG (H+L) IRDye 680RD, Li-COR, Lincoln, NE). After densitometry the levels of protein for each dog was adjusted based on GAPDH and normalized to the untreated hemophilia A dog. Uncropped image of Western blot is provided (Source Data Supp Fig. 4).
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8

Western Blot Analysis of PGC-1α

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Frozen tissues were lysed in ice-cold RIPA buffer complemented with 1 × protease inhibitor cocktail (#11836153, Roche, Monza, MB, Italy). Protein concentrations were determined using the Pierce BCA protein assay reagent (#23227, Thermo Scientific). Lysates (30 μg) were separated on NuPage Bis-Tris 4-12% Pre-Cast gels (#NP0322BOX, Invitrogen) and transferred to nitrocellulose membranes (Whatman, Dassel, Germany). Primary antibodies rabbit anti-PGC-1α (1:1000, Chemicon #AB3242) and mouse anti-α-tubulin (1: 10,000, Sigma-Aldrich #T5168) were used with the appropriate secondary antibodies: respectively goat anti-rabbit IgG (H + L) IRDye 800CW (1:2500, #926-32211, LI-COR Biosciences, Bad Homburg, Germany); goat anti-mouse IgG (H + L) IRDye 680RD (1:3500, 926-68070, LI-COR Biosciences). Signals were acquired in dual infrared fluorescence with the Odyssey FC instrument (LI-COR Biosciences). Quantification was performed using Image Studio Lite software. The intensity of the bands was calculated from three immunoblots with samples from different cell preparations. Mean values were referred to as the control value, set at 1.0.
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9

EZH2 and PD-1 Modulation in Cancer

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EPZ6438 and GSK126 were purchased from Selleckchem (S7128) and Chemietek (CT-GSK126), respectively. Recombinant human and mouse IFNγ were purchased from Peprotech (AF-300–02, AF-315–05). OVA (257–264) SIINFEKL peptide (AS-6-193-1) was purchased from AnaSpec. Primary antibodies against mouse EZH2 (4905, Cell signaling), β-actin (4967, Cell signaling), H3K27me3 (9733, Cell signaling), and Histone H3 (ab1791, Abcam) were used for western blot. Secondary antibody (IRDye® 800CW Goat anti-Rabbit IgG (H + L)) was purchased from LI-COR. EZH2 antibody (39901, Active Motif), H3K27me3 antibody (39055, Active Motif), and Rabbit IgG (15006, Sigma Aldrich) were used in the chromatin immunoprecipitation (ChIP) assay. For in vivo mouse studies, we used a rat anti-mouse monoclonal anti-PD-1(RMP1–14, BE0146) and a rat IgG2a isotype control (2A3, BE0089) from BioXCell.
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10

Protein Isolation and Western Blot Analysis

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Protein isolation was performed using NP-40 lysis buffer (50 mmol/L Tris-HCl pH 7.5, 150 mmol/L NaCl, 1% NP-40, 0.5% sodium deoxycholate, 1 mmol/L EDTA pH 8 and 1 tablet of protease inhibitor cocktail Roche cOmplete (Roche) and 1 tablet of phosphatase inhibitor PhosSTOP (Roche). A total of 30 μg of protein per sample was separated on NuPAGE 4% to 12% Bis-Tris precast polyacrylamide gels (Novex, Thermo Fisher Scientific), transferred onto iBLOT2 polyvinylidene difluoride membranes (Invitrogen, Thermo Fisher Scientific) then blocked using Odyssey blocking buffer (LiCor). Primary antibodies used in Western blot analysis were cleaved caspase-3 (Asp175 No. 9661, Cell Signaling, Technology), BIMS/EL/L (ALX-804–527, Enzo Life Sciences), BMF (ALX-804–343-C100, Enzo Life Sciences), MCL-1 (5453S, Cell Signaling Technology), phosho-p44/42 MAPK (ERK1/2) Thr202/Thr204 (4370, Cell Signaling Technology), p44/42 MAPK (ERK1/2; 9107, Cell Signaling Technology), β-actin (A5316, Sigma-Aldrich), and β-tubulin (ab6046, Abcam). Secondary antibodies used include IRDye 680RD Goat anti-mouse IgG (H+L), IRDye800CW Goat anti-rabbit IgG (H+L), and IRDye680RD Goat anti-rat IgG (H+L; LiCor). Signal was detected using an Odyssey imaging system (LiCor).
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