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6 protocols using menadione

1

Cultivation and Maintenance of Oral Bacteria

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All strains used in this study are shown in Table 1. All Porphyromonas and Prevotella strains were grown in brain heart infusion (BHI) broth (Beckton Dickinson Co., Franklin Lakes, NJ, USA) supplemented with hemin (5 µg/mL) (Fujifilm Wako Chemicals Co., Tokyo, Japan) and menadione (1 µg/mL) (Fujifilm Wako Pure Chemicals, Osaka, Japan), or on BHI blood agar plates (BAP) containing hemin and menadione. Porphyromonas gingivalis strain ATCC 33277 was mainly used for this study to screen the herbal products for anti-bacterial activity as well as to further examine the activity in detail. BHI broth and BHI BAP (without hemin and menadione) were used to maintain strains of the other oral bacteria including streptococci and Aggregatibacter actinomycetmcomitans, Fusobacterium nucleatum. All oral bacteria were grown in an anaerobic chamber (miniMACS anaerobic workstation; Don Whitley Scientific Ltd., Shipley, UK) in 80% N2, 10% H2, and 10% CO2 at 37 °C. A laboratory Escherichia coli strain BW25113, which was used for bacterial membrane potential assay, is maintained in LB (Becton Dickinson) broth and on LB agar under aerobic conditions.
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2

Culturing Porphyromonas gingivalis Strains

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Porphyromonas gingivalis JCM12257 (ATCC33277), JCM8525, and JCM19600 were purchased from RIKEN BioResource Research Center (Ibaraki, Japan). Anaerobes were grown at 37°C under anaerobic conditions (AnaeroPack System, Mitsubishi Gas Chemical, Tokyo, Japan) using Gifu anaerobic medium bouillon (Nissui, Tokyo, Japan), supplemented with 5 μg/mL hemin (Sigma-Aldrich, St. Louis, MO, USA) and 1 μg/mL menadione (Fujifilm Wako Pure Chemical Industries, Osaka, Japan) (GAM) [21 (link)]. Ampicillin sodium (Wako Pure Chemical Industries, Osaka, Japan) was used in a final concentration of 50 μg/mL as a positive control.
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3

Measurement of Intracellular ROS in C. glabrata

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Intracellular ROS levels in C. glabrata were analyzed by measuring fluorescent DCF derived from the reaction of CM-H2DCFDA (Thermo Fisher Scientific, C6827) and ROS. Cell-permeable CM-H2DCFDA is not fluorescent; it reacts with ROS to produce fluorescent DCF. Logarithmic-phase cells were washed with PBS, resuspended in PBS with 10 μM CM-H2DCFDA, and incubated at 30°C for 1 h. The cells were washed, resuspended in SC-trp with H2O2 (Wako, 084-07441), tert-butyl hydroperoxide (Wako, 026-13451), menadione (Wako, 132-08132), or diamide (Sigma-Aldrich, D3648), and cultured at 30°C for 1 h. The cells were washed and resuspended in PBS, and fluorescence was measured with a PHERAstar FS multi-mode microplate reader (BMG LABTECH, Offenburg, Germany) at 485 nm fluorescence excitation wavelength and 520 nm emission wavelength. The cell count of each sample was determined, and relative fluorescence intensity per cell was calculated.
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4

Anaerobic Cultivation of Porphyromonas gingivalis

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Porphyromonas gingivalis JCM12257 (ATCC33277), JCM8525, and JCM19600 were purchased from RIKEN BioResource Research Center (Ibaraki, Japan) [14 (link)]. All three strains were grown at 37 °C under anaerobic conditions (AnaeroPack™-Anaero, Tokyo, Japan) in a Gifu anaerobic medium broth (Nissui, Tokyo, Japan) supplemented with 5 µg/mL hemin (Sigma-Aldrich, St. Louis, MO, USA) and 1 µg/mL menadione (Fujifilm Wako Pure Chemical, Osaka, Japan) (GAM medium). Ampicillin sodium (ABPC) (Fujifilm) was only used as a positive control at a final concentration of 50 µg/mL.
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5

Quantification of Oral Veillonella by Cultivation

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These homogenized saliva samples were serially diluted by 10-fold with sterile phosphate buffer saline (PBS) from 10
-3 to 10
-7. Aliquots (100 µl) of each diluted sample were inoculated into Bacto
TM Brain Heart Infusion (BHI, Difco Laboratories, Detroit, MI, USA) supplemented with 5% (volume/volume) defibrinated sheep blood (BHI agar), hemin (10 μg/mL, Wako, Osaka, Japan), menadione (5 µg/ml, Wako), and the selective medium
Veillonella agar
23 (link). After inoculation, all media were incubated under anaerobic conditions with 10% H
2, 85% N
2, and 5% CO
2 at 37°C.
Veillonella agar was incubated for 5 days and BHI agar was incubated for 7 days. The bacterial colonies grown on BHI and
Veillonella agar were counted as the total number of bacteria and typical
Veillonella colonies in the saliva sample, respectively. Bacterial cells of typical
Veillonella colonies were confirmed as gram-negative cocci with light microscopy after gram staining. Standard strains consisted of
V. atypica ATCC 17744
T,
V. denticariosi JCM 15641
T,
V. dispar ATCC 17748
T,
V. parvula ATCC 10790
T,
V. rogosa JCM 15642
T, and
V. tobetsuensis ATCCBAA-2400
T.
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6

Analytical Workflow for Xenobiotic Metabolites

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Methiocarb, carbaryl, 1-naphthol, methiocarb sulfoxide, methiocarb sulfone, 4-methylthio-3,5-xylenol (MX), 3,5-dimethyl-4-(methylsulfinyl)phenol (SP), 3,5-dimethyl-4-(methylsulfonyl)phenol (SOP), menadione, 2-hydroxypyrimidine, rat albumin and human albumin were purchased from Wako Pure Chemical Industries (Osaka, Japan). Eserine, 2-chloro-3,4-dimethoxybenzyl (CDMB), bis(4-nitrophenyl)phosphate (BNPP), 5-pregnen-3β-ol-20-one-16α-carbonitrile (PCN), artemisinin, and bezafibrate (BZF) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Infinity pure dimethyl sulfoxide (DMSO; > 99.5% pure) was purchased from Wako Pure Chemical Industries. Human recombinant CYP and FMO isoforms expressed in a baculovirus system and pooled human plasma were purchased from BD Gentest (Woburn, MA, USA).
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