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Centro lb960 xs3

Manufactured by Berthold Technologies
Sourced in Germany

The Centro LB960 XS3 is a compact multi-mode microplate reader designed for high-throughput screening and quantitative analysis. It features a patented monochromator-based optical system that provides flexible wavelength selection from 200 to 850 nm. The instrument supports a wide range of detection modes, including absorbance, fluorescence, and luminescence measurements.

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9 protocols using centro lb960 xs3

1

Dual-luciferase Assay for circRNA-miRNA Interactions

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Dual-luciferase reporter assay was used to evaluate the direct binding between circ-ZKSCAN1 and miRNAs. psiCHECK2 (GenePharma, China) vector contains firefly luciferase gene (hLuc+) and renilla luciferase gene (hRluc). The sequence of circ-ZKSCAN1 was cloned into the vector. NC vector or circ-ZKSCAN1 vector was co-transfected with each miRNAs mimics. The relative values of hLuc+ and hRluc were detected by Centro LB960 XS3 (Berthold, German). Luciferase reporter assay was used to detect whether p21 is the direct target of miR-1178-3p. The 3’UTR sequence of p21 was cloned into pcDNA3.0 vector. Next, miR-1178-3p mimics or NC was co-transfected with wild-type vector or the mutant vector. The relative value of luciferase was also detected by Centro LB960 XS3 (Berthold, German).
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2

Binding Assay for circSPARC and JAK2

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A dual luciferase reporter assay was used to evaluate the direct binding between circSPARC and miRNAs as well as JAK2 and miRNAs. The circSPARC sequence was cloned into the psiCHECK-2 (GenePharma, China) vector, which contains the firefly luciferase gene (hLuc+) and Renilla luciferase gene (hRluc).. The NC vector or circSPARC vector was co-transfected with each miRNA mimic. The relative values of hLuc+ and hRluc were detected by Centro LB960 XS3 (Berthold, Germany). A luciferase reporter assay was used to determine whether JAK2 is the direct target of miR-485-3p. The 3’UTR sequence of JAK2 was cloned into the pcDNA3.0 vector. Next, the miR-485-3p mimic or NC was co-transfected with wild-type vector or the mutant vector. The relative luciferase value was also detected by Centro LB960 XS3 (Berthold, Germany).
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3

Dual-Luciferase Assay for circHERC4-miRNA Interactions

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We used a dual-luciferase reporter assay to confirm the direct binding between circHERC4 and miRNAs. PsiCHECK2 (IGE Biotech, China) vector included firefly luciferase gene (hLuc+) and renilla luciferase gene (hRluc). The sequence of circHERC4 was cloned into the psiCHECK2 vector. NC vector or circHERC4 vector was co-transfected with each miRNA mimics. The relative values of hLuc+ and hRluc were measured by Centro LB960 XS3 (Berthold, German). Luciferase reporter assay was applied to explore whether CTBP2 was the direct target of miR-556-5p. The 3’UTR sequence of CTBP2 was cloned into the pcDNA3.0 vector. Subsequently, CTBP2 vector was co-transfected with NC or miR-556-5p mimics. The relative value of luciferase was also evaluated by Centro LB960 XS3 (Berthold, German).
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4

Luciferase Developmental Rate Assay

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Luciferase developmental rate assays were performed as described (Olmedo et al., 2015 (link)). Briefly, single arrested L1 animals were transferred into one well of a 96-well plate containing 100 μl of S-basal medium with 200 μM D-Luciferin and simultaneously resumed development by adding 100 μl of S-basal with bacteria. Plates were sealed with a gas-permeable cover (Breathe Easier, Diversified Biotech) and luminescence was measured in a Berthold Centro LB960 XS3 for 1 sec, at 5-min intervals.
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5

Bioluminescence Assay for Circadian Rhythms

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White, 96-well plates (Nunclon Delta, Thermo Fisher Scientific) were used, with each well inoculated with 5 × 105 cells. Plates were sealed with a transparent, evaporation-free cover (Optical Adhesive Covers, Applied Biosystems, Life Technologies). Cultures were exposed to light-darkness cycles as indicated in the text, after which the cultures were released to constant conditions (either constant darkness or light). The temperature was kept constant at 27°C. We measured bioluminescence (Berthold Centro LB960 XS3 or Berthold Mithras LB 940 Multimode Plate Reader) for 1 s each hour. All experiments were carried out in temperature-controlled incubators (MIR-154, Panasonic, Japan or Percival Intellus, Percival, USA). In entrainment experiments, the plates were ejected from the machine between readings for exposure to light.
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6

Dual Luciferase Reporter Assay Protocol

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Dual luciferase reporter assay was performed using the procedure as previously described [23 (link)]. The relative values of hFluc and hRluc were detected by Centro LB960 XS3 (Berthold, German). Firefly luciferase activity was normalized to Renilla luciferase activity.
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7

Dual-Luciferase Assay for miRNA Binding

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Wild-type (wt) and mutant (mut) binding sequences of circ_0021350 or PIK3R3 3ʹUTR to miR-1207-3p were cloned into the pmirGLO vector (Promega, Madison, WI, USA). HEK-293T cells were seeded in 24-well plates at a density of 2 × 105cells/well and transfected with the corresponding plasmids and miR-1207-3p mimics/mimics-NC. Luciferase activity was measured following the manufacturer’s instructions using a dual-luciferase reporter assay kit (Beyotime, China) and detected using a Centro LB960 XS3 (Berthold, Germany).
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8

Dual-Luciferase Assay for miR-17-5p and TLR4

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The binding site between miRNAs and target genes was examined by the use of dual-luciferase reporter assay as previously described [26 (link)]. Briefly, PsiCHECK2 (IGE Biotech, China) vector included firefly luciferase gene (hLuc+) and renilla luciferase gene (hRluc) was used in this assay. Luciferase reporter assay was performed to explore whether TLR4 was the direct target of miR-17–5p. The 3′ UTR sequence of TLR4 was cloned into the vectors (PsiCHECK2-WT-TLR4 and PsiCHECK2-MUT-TLR4). According to the manufacturer's instructions, TLR4 vector was co-transfected with NC or miR-17–5p mimics. The relative value of luciferase was measured by Centro LB960 XS3 (Berthold, German).
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9

Luciferase Assay for EGFR-3'UTR Binding

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The luciferase reporter assay was employed to evaluate the direct binding specificity between EGFR 3′UTR and IGF2BP3. For the luciferase reporter assays, a wild (EGFR–3’UTR) or mutant (EGFR–3′UTR-Mut #1 or #2) fragment was inserted into a pmirGLO vector (Promega, Madison, WI, USA) containing the firefly luciferase gene (hLuc+) and renilla luciferase gene (hRluc). UM cells cultured in 24-well plates at 60%–80% confluency were transfected with the pmirGLO wildtype or mutant reporter vector along with circ_0053943 plasmid or vectors using Lipofectamine 3000 (Invitrogen) according to the manufacturer’s protocol. The relative values of hLuc+ and hRluc were detected by Centro LB960 XS3 (Berthold, Bad Wildbad, German), and each measurement was repeated three times.
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