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8 protocols using fitc rat anti mouse cd11b

1

Isolation and Analysis of Myeloid Cells

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Tumors and lungs were minced with a razor blade followed by digestion with collagenase (1 mg/mL) and DNaseI (30 μg/mL) in RPMI with 5% FBS for 1.5 hours at 37°C. Bone marrow was obtained by flushing bones with FACS buffer (2% FBS, 1% pen/strep in PBS). Single cell suspensions were subject to erythrocyte depletion with red blood cell lysis buffer (150 mM NH4Cl, 1 mM KHCO3, 0.1 mM EDTA) followed by two washes with FACS buffer. Cells were then stained with the indicated antibodies for 10 minutes at room temperature before flow cytometry analysis. [rat anti-mouse Gr-1-PerCP (Biolegend, #108426, clone RB6-8C5); rat anti-mouse CD11b-FITC (BD Biosciences, #553310, clone M1/70); rat anti-mouse Ly6G-PE (BD Biosciences, #551461, clone 18A); rat anti-mouse Ly6C-APC (eBioscience, # 17-5932-82, clone HK1.4)] Sorting experiments were performed on a BD FACSAriaIII cell sorter and all others were analyzed on a BD FACSCantoII. Analysis was performed using FlowJo software. Average percentages were reported with error bars representing standard error of the mean.
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2

Multiparameter Analysis of Myeloid Cells

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Cells were blocked with FcR blocking reagent (BD Biosciences) at 4 °C for 10 mins. Cells were permeabilized with Cytofix/Cytoperm (BD Biosciences) for 25 min on ice followed by staining with Rat Anti-Mouse CD11b-FITC (BD Biosciences, 1:100, Cat#557396), Rat Anti-Mouse CD40-PE(BD Biosciences, 1:100, Cat#561846), and Rat Anti-Mouse CD206-PE (eBioscience™, Cat#12-2061-80) antibodies for 30 min at 4 °C. Cells were then analyzed on a FACS Calibur. Data were analyzed using FlowJo software.
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3

Isolation and Characterization of Murine Microglia

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Mice were anesthetized with 40 mg/kg of pentobarbital sodium and transcardially perfused with ice-cold PBS. Brain tissues were obtained, and cerebrum was dissected and separated into ipsilateral and contralateral hemispheres. Ipsilateral hemispheres were mechanically dissociated using a razor blade and placed in a 15-ml conical tube with digestion solution [0.6 mg/ml of collagenase D (Sigma)]. Then, the mixture were incubated for 30 min at 37°C. After that, a 70-μm strainer was used to generate a single-cell suspension (BD FALCON). Cells were isolated by centrifugation (30 min, 800 × g at 23°C) using 30–70% Percoll gradient solutions (GE Healthcare) (Agalave et al., 2020 (link)). Isolated cells were washed and resuspended in PBS with 0.01% bovine serum albumin (BSA) and then incubated with indicated anti-mouse antibodies for 30 min at 4°C [rat anti-mouse CD45 perCP (BD Bioscience) and rat anti-mouse CD11b FITC (BD Bioscience)]. The population of microglia (CD45 positive and CD11b positive) was sorted.
In flow cytometry, rat anti-mouse Ly6G PE and rat anti-mouse Ly6C APC (BD Bioscience) antibodies were used and incubated with CD45 perCP and CD11b FITC.
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4

Flow Cytometry, Western Blot, and Cytotoxicity Assays

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The following antibodies were used for flow cytometry, Western blot, and cytotoxicity assay. Anti-mouse IL-15Rα antibody (sc-374023; Santa Cruz), anti-mouse IL-15 antibody (Ab7213; Abcam, UK), FITC-rat anti-mouse CD4 (553729; BD, USA), PE-rat anti-mouse CD4 (553730; BD), FITC-rat anti-mouse CD8 (553031; BD), APC-rat anti-mouse CD62L (104411; BioLegend), PE-rat anti-mouse CD44 (553134; BD), purified hamster anti-mouse CD3 (557306; BD), FITC-goat anti-hamster (Armenian) IgG (405502; BioLegend), APC-rat anti-mouse CD49b (108909; BioLegend), purified anti-mouse CD8 (100701; BioLegend), purified anti-mouse (100401; BioLegend), FITC-rat anti mouse CD11b (557396; BD), PE-rat anti-mouse MHC class II I-A/I-E M5/114 (562010; BD), anti-Ld MHC class I (24-14-8S), FITC-secondary goat anti-mouse IgG (sc-2005; Santa Cruz).
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5

Vitamin C Modulates Cellular Responses

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Vitamin C (purity: > 99.9%) was purchased from Shandong Xinhua pharmaceutical CO., ltd. DMEM Medium, Fetal Bovine Serum (FBS), Wright-Giemsa staining, and Albumin Bovine V were purchased from MACGENE. RBC lysis Buffer, Sulforhodamine B (SRB), RNase A, Propidium Iodide (PI), and rat IgG were purchased from Solarbio. Triton X-100 solution, Ca2+ specific fluorescent probe Fluo-4/AM, JC-1 Staining Kit, One Step TUNEL Apoptosis Assay Kit, and ATP Determination Kit were purchased from Beyotime. FITC Rat Anti-Mouse CD11b was purchased from BD Biosciences. APC Rat Anti-Mouse CD206 was purchased from Miltenyi Biotec. Western blot Antibody Diluent was purchased from Epizyme. Western Bright™ ECL and Western Bright™ Peroxide were purchased from Advansta. Goat Anti-Rabbit IgG (H+L) HRP was purchased from Affinity Biosciences. Vimentin (5G3F10) Mouse mAb, Cleaved Caspase-3 (Asp175) Antibody (Alexa Fluor® 488 Conjugate) and β-actin (13E5) Rabbit mAb were purchased from Cell Signaling Technology. E-cadherin Rabbit PolyAb was purchased from Proteintech.
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6

Flow Cytometry Analysis of Macrophage Markers

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The RAW264.7 cells were harvested from a 6-well plate and washed with cold PBS three times. Then, the cells were stained with PE Rat Anti-Mouse F4/80 (565410, BD, United States), FITC Rat Anti-Mouse CD11b (557396, BD, United States), APC-Cy7 Hamster Anti-Mouse CD11c (561241, BD, United States), PE-Cy7 Rat Anti-Mouse CD16/CD32 (560829, BD, United States) and Rat Anti-Mouse CD206 (565250, BD, United States) antibodies at 4°C for 30 min. After staining, the cells were washed with PBS three times and resuspended with 100 μL of PBS for FACS analysis using a BD FACSAria II instrument (BD, United States). The data were further analyzed using Flowjo software 7.6.
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7

Macrophage Activation and Characterization

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All cell culture media, trypsin, fetal bovine serum (FBS), and antibiotic/antimycotic solutions were obtained from Invitrogen (Carlsbad, CA, USA). The L-929 fibroblast (CCl-1), LADMAC macrophage/monocyte (CRL-2420), and C3H/HeJ mouse I-13.35 splenic cell lines (CRL-2471) deficient for TLR-4 were purchased from the American Type Tissue Collection (ATCC) (Manassas, VA, USA). Endotoxin tested (less than 0.1 ng/μg) IFNγ (#I1000) was purchased from US Biological (Salem, MA, USA), the inducible nitric oxide synthase (iNOS) (#2977) antibody from Cell Signaling Technology (Danvers, MA, USA), the anti-monocyte/macrophage antibody (MOMA-2, ab33451) and anti-integrin beta-1 antibody (CD29) (#ab23834) from Abcam (Cambridge, MA, USA), and the fluorescein isothiocyanate (FITC) rat anti-mouse CD44 (#553133), phycoerythrin (PE) rat anti-mouse CD105 (#562759), PE rat anti-mouse Ly-6AE (Sca-1) (#561076), FITC rat anti-mouse CD45 (#553080), FITC rat anti-mouse CD106 (#553332), PE rat anti-mouse CD73 (#557041), and FITC rat anti-mouse CD11b (#553310) were purchased from BD Biosciences (San Jose, CA, USA). Human ox-LDL was purchased from Intracel (Frederick, MD, USA). Gamma-irradiated LPS from Escherichia coli (#L4391) and all other chemicals and reagents were purchased from Sigma-Aldrich (St. Louis, MO, USA) unless otherwise specified.
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8

Quantification of Retinal Immune Cells

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Retinas and RPE-Choroid from both WT and p75NTR KO mice, with or without laser, were obtained 4 days after the lesion. Under dissecting microscope, retinas and RPE-Choroid were collected in separate tubes and homogenized by gentle pipetting in FACS buffer (cold PBS with 2% FBS, 0.1% sodium azide). Cell suspensions were filtered through a 70 µm cell strainer and washed in FACS buffer. Viability of the cells was checked by Alexa Fluor 700 NHS ester dye (1/15.000; Molecular Probes, Eugene, OR, USA) [37 (link)]. Cells were incubated for 30 min at 4 °C with mouse anti f4/80 (1/50; Invitrogen), rabbit anti CX3CR1 (1/100; Abcam, ab8021), FITC rat anti mouse CD11b (1/200; BD Biosciences, Franklin Lakes, NJ, USA), and APC e-Fluor 780 anti-mouse CD45 (1/200; Bioscience). Then, cells were washed with FACS buffer and incubated with goat against mouse IgG conjugated with Alexa Fluor 594 (1/250; Molecular Probes, Eugene, OR, USA) for 30 min at 4°C. FACS of at least 350,000 cells from each RPE-Choroid and 1,000,000 cells from each retina was performed. The labeled cells were analyzed on a BD LSR Fortessa X-20 cytometer (BD Biosciences, Franklin Lakes, NJ, USA) with the FlowJo software (TreeStar), and data are analyzed using FlowJo software (version 7.6.5; FlowJo, Ashland, OR, USA).
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