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3 protocols using cholesteryl hemisuccinate tris salt

1

Structural Elucidation of KCNQ1-Calmodulin Complex

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The human KCNQ1 gene with a C-terminal strep tag was expressed in HEK293S cells at 30 °C for 48 h using the BacMam system. Protein was extracted with 1.5% n-dodecyl-β-D-maltoside (Anatrace) and 0.3% cholesteryl hemisuccinate Tris salt (Anatrace) at 4 °C for 3 h. After purification with Strep-Tactin Sepharose resin (IBA) and size-exclusion chromatography on a Superose 6 10/300 GL column (GE Healthcare), the final sample was concentrated to 8 mg/mL for single-particle analysis. The cryo-EM grids were prepared using a Mark IV Vitrobot (FEI). Micrographs were acquired with a Titan Krios microscope (FEI) operated at 300 kV with a K2 summit direct electron detector (Gatan) via SerialEM (54 (link)) following standard procedure. The defocus range was set from –1.1 to –1.3 μm. Data were dose fractionated to 40 frames with a dose rate of 8 e/pixel/s and a total exposure time of 8 s, corresponding to a total dose of ∼64 e2. Image processing and three-dimensional reconstruction were performed following standard procedures, and the final resolution was estimated by the gold-standard Fourier shell correlation = 0.143 criterion (SI Appendix, Figs. S1–S4 and Table S1). The structure of human KCNQ1-CaM complex (PDB: 6UZZ) (8 (link)) was used as the initial model for model building.
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2

Purification and Characterization of Membrane Proteins

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Oligonucleotides were purchased from Operon Biosciences. Restriction enzymes and DNA-modifying enzymes were obtained from New England Biolabs. The Complete His resin was from Roche. The purified Strep-Tactin XT, Strep-Tactin XT Superflow and MagStrep “type3” XT beads were kindly provided by IBA GmbH. Research grade sensor chip CM4, immobilization reagents NHS, EDC, and ethanolamine and HBS-N buffers for SPR experiments were from GE Healthcare.
Cholesteryl hemisuccinate Tris salt (CHS) and detergents 3 [(cholamidopropyl) dimethylammonio]-1-propanesulfonate (CHAPS) and n-dodecyl-b-D-maltosyde (DDM) were obtained from Anatrace. Lipids 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine sodium salt (POPS) were purchased from Avanti Polar Lipids Inc. Synthetic cannabinoid ligand CP-55,940 was from Tocris. All other chemicals of reagent grade were purchased from Sigma.
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3

Detergent-based Expression and Quantification of NTSR1

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The detergents n-Dodecyl-β-D-maltoside (LM), 3-[(3-cholamidopyropyl) dimethylammonio] -1- propane sulfonate (CHAPS) and cholesteryl hemisuccinate Tris salt (CHS) were obtained from Anatrace. Cell pellets from 2 mL of suspension culture were suspended in Tris-glycerol-NaCl buffer. Then the detergents LM, CHAPS and CHS were added to give a final buffer composition of 50 mM TrisHCl pH 7.4, 200 mM NaCl, 30%(v/v) glycerol, 1% (w/v) LM, and 0.6%(w//v) CHAPS and 0.12%(w/v) CHS in a total volume of 0.5 mL. The samples were placed on a rotating mixer at 4°C for 1 hour. Cell debris and non-solubilized material were removed by ultracentrifugation (TL100 rotor, 60k rpm, 4°C, 30 min in Optima Max bench-top ultracentrifuge, Beckman), and the supernatants containing detergent-solubilized NTSR1 were used to determine the total number of expressed receptors by a detergent-based radio-ligand binding assay (see below).
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