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Anti cd8 pe cy7

Manufactured by Thermo Fisher Scientific
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The Anti-CD8-PE/Cy7 is a laboratory reagent used in flow cytometry applications. It is a conjugated antibody that binds to the CD8 cell surface marker, allowing for the identification and enumeration of CD8-positive cells in a sample. The PE/Cy7 fluorochrome attached to the antibody enables the detection of the labeled cells using appropriate flow cytometry instrumentation.

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14 protocols using anti cd8 pe cy7

1

Transduction and Characterization of CD8+ T Cells

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CD8+ T cells were inoculated at 1 × 106 cells/ml in 6‐well plates in the presence of 100 U/ml IL‐2 and 50 ng/ml OKT3 antibody (Ortho Biotech, Raritan, NJ, USA) 72 hrs before transduction. The concentrated recombinant virus suspension containing 8 μg/ml of polybrene (according to the final media volume) was added, and 4 hrs later the fresh medium was supplemented to dilute the polybrene to 2 μg/ml. Five days after transduction, gene‐modified CD8+ T cells were collected to detect the expression of GFP and incubated with PE‐Cy7‐anti‐CD8 (eBioscience, San Diego, CA, USA), PE‐labelled Ag85B199‐207/HLA‐A*0201 dextramer and APC‐labelled Env120‐128/HLA‐A*0201 dextramer (Immudex, Copenhagen, Denmark) according to the manufacturer's instructions to detected the exogenous TCR by flow cytometry.
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2

Comprehensive Immune Cell Analysis in Murine Tumor Models

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The immune phenotype of splenocytes and tumor infiltrating lymphocytes (TIL) were analyzed in all the three models by flow cytometry. TILs were isolated as previously described [12 (link)]. Splenocytes were processed for analysis according to our previously published methods [13 (link)]. For FOXP3 and CD4/CD8 evaluation, 1μg anti-mouse CD16/CD32 (BD Pharmingen) was used to block nonspecific binding for 30 minutes at room temperature then 0.4μg each of PE anti-CD3 (BD Pharmingen, clone #145-2C11), PE/Cy5 anti-CD4 (BioLegend, clone #GK1.5), and PE-Cy7 anti-CD8 (eBioscience, clone #53-6.7) were added. After overnight permeabilization of the cells, 1μg anti-FOXP3 Alexa488 (eBioscience, clone #FJK.16s) was added for 30 minutes. For myeloid derived suppressor cell (MDSC) evaluation, 0.4μg of GR-1 (BD Pharmingen, clone #RB6-8C5) and anti-mouse CD11b were added and incubated for 30 minutes at room temperature (eBioscience clone #M1/70). After the appropriate antibodies were applied to each single cell suspension of tumor or spleen for 30 min at room temperature, the stained cells were acquired with FACSCanto flow cytometer (BD Bioscience) and analyzed with FlowJo software (Tree Star Inc.). Results are reported as mean ± SEM of the total percentage of a cell population or ratio of cell quantities, as indicated.
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3

Intracellular IFN-γ Staining of TCR-Modified CD8+ T Cells

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For intracellular IFN‐γ staining, TCR gene‐modified CD8+ T cells were stimulated by Ag85B199‐207 or Env120‐128 peptide‐loaded DCs in the presence of IL‐2 (50 U/ml) and Brefeldin A (10 μg/ml, Sigma). After 24 hrs, 1 × 106 of cocultured cells were centrifugated at 300 × g for 4 min. and washed by 5% FBS‐PBS for 1–2 times, then fixed and permeabilized with BD Cytofix/Cytoperm Fixation/Permeabilization Solution Kit (BD Pharmingen Company, San Jose, CA, USA) and stained with PE‐Cy7‐anti‐CD8 and PE‐anti‐IFN‐γ (eBioscience) according to the instructions. Data acquisition and analysis was done by flow cytometry.
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4

Isolation and Characterization of Tumor-Infiltrating CD8+ T Cells

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Tumors isolated from mice were processed as previous described(51). In brief, pre-warmed Collagenase A (Roche) solution was used for digestion and tumors were homogenized using the gentle MACStm Dissociator (Miltenyi Biotec). Tumors cells were further stained with PeCy7-anti-CD8 (eBioscience, clone 53–6.7, 25–5273–41) and FITC-anti-CD103 (BD Biosciences, clone 2E7, 333155). For the dextramer staining, cell suspensions were first washed twice in FACS buffer (PBS containing 0.5% bovine serum albumin) and stained with PE-H-2Db E749–57 dextramers (Immudex, Copenhagen, Denmark) for 10 min at room temperature. Subsequently, the cells were stained with PE-Cy7-anti-CD8a Ab and FITC-anti-CD103 Ab. To exclude dead cells, cells were stained with Zombie Violet™ (Biolegend, 423113).
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5

Comprehensive Tumor Immune Cell Profiling

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Tumors were chopped into small pieces that were then transferred into gentleMACS Tubes (MACS Miltenyi Biotec), containing 10 mL of DMEM media and 1 mg/mL collagenase D (Sigma-Aldrich, COLLD-RO Roche, #11088866001). The tubes were placed on a gentleMACS Dissociator (MACS Miltenyi Biotec, #130-095-937) using the program 37_m_TDK2. After incubation, cells were filtered using 70 µm cell strainer and recovered by centrifugation. Cells were stained for live/dead with either LIVE/DEAD Fixable Violet Dead Cell Stain Kit, for 405 nm excitation (Thermo Fisher, cat#L34963) or Zombie NIR (BioLegend, cat#423105) then stained with a cocktail of surface mAbs Panel 1: BV711 anti-CD45 (BioLegend, cat#103147), PE anti-NK1.1 (BioLegend, cat#108707) and PE/Cy7 anti-CD8 (eBioscience, cat# 25-0083), APC anti-CD4 (eBioscience, cat#14-0042-81), BV421 anti-F4/80 (BioLegend, cat#123137) and PE/Dazzle 594 anti-CD183 (CXCR3) (BioLegend, cat#155914); Panel 2: BV711 anti-CD45 (BioLegend, cat#103147), APC anti-IFNg (BioLegend, cat#505810) and PE/Dazzle 594 anti-T-bet (BioLegend, cat#644828), PE/Cy7 anti-CD4 (BioLegend, cat#100422). After 30 min of staining, cells were washed and samples were run on FACS Symphony Cytometer (BD Biosciences). FlowJo V.10 was used for the analysis, cells were manually gated on size and granularity. Dead cells and doublets were excluded, and CD45 + cells were selected.
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6

Flow Cytometric Analysis of B Cell Populations

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Flow cytometric analysis of B cell populations was performed using our previously described gating strategies8 (link)15 (link)16 (link)17 (link). Following red cell lysis, cells were counted and stained with a cocktail of antibodies for the detection of the indicated populations using anti-CD19-AF700, anti-CD23-PE/Cy7, anti-CD21-E450, anti-CD43-PE/Cy7, anti-GL7-FITC, anti-CD138-PE, anti-B220-E450, anti-B220-APC, anti-IL-10-APC, anti-CD3-FITC, anti-CD4-PerCP and anti-CD8-PE/Cy7 antibodies from eBioscience and Biolegend. Plasma cells were phenotyped as (Dump (CD3, CD4, CD8, CD11b, GR1 & CD11c) CD138+CD19B220) with the Dump+ markers identified using biotinylated antibodies and svPE. Alternatively, splenocytes were stimulated with 50 ng/ml PMA (Sigma-Aldrich, UK) plus 500 ng/ml ionomycin (Sigma-Aldrich, UK) and 10 μg/ml LPS (E. coli O111:B4, Sigma-Aldrich, UK) for 1 h before addition of 10 μg/ml Brefeldin A (Sigma-Aldrich, UK) and cells were then incubated for a further 5 h at 37 °C with 5% CO2. Cells were fixed and washed several times in permeabilization buffer before anti-IL-10 was added in permeabilization buffer and incubated at 4 °C for 30 minutes. Cells were then washed three times with permeabilization buffer and finally with FACs staining buffer before data were acquired using a BD LSR II flow cytometer and analysis undertaken by FlowJo software (TreeStar).
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7

Cd244 Knockout Mice for Immunological Studies

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C57BL/6 (WT) mice were purchased from The Jackson Laboratories (Bar Harbor, ME).
Cd244-/- mice on the C57BL/6 background [12 (link)], were kindly provided by Dr. Raymond Welsh (University of Massachusetts Medical Center, Worcester, MA). Mice were maintained in the Translational Biomedical Research Center of the Medical College of Wisconsin and both genders were used for experiments in an age (6–12 week) and gender-matched manner. anti-CD45R-PE-Texas Red, anti-CD45R-PE, anti-GL7-FITC and anti-CD5-APC were purchased from BD Biosciences (San Jose, CA). CD21-eFluor 450, anti-CD23-PE-Cy7, anti-CD93-biotin, anti-CD4-APC-eFluor 780, anti-CD8-PE-Cy7, anti-TCRβ-FITC, anti-TCRβ-PE, anti-CD11b-Alexa Fluor 488, anti-CD244, anti-Foxp3-PE, anti-CD19-Alexa 700, anti-CD4-PE, anti-IgG-FITC and Streptavidin PE-Cy5.5 were purchased from eBioscience (San Diego, CA). Anti-CD11b-Brilliant Violet 605, anti-CD11c-PE, anti-NK1.1-APC, anti-IgM-APC Cy7, anti-IgD-Pacific Blue, anti-CD38-Alexa Fluor 647, anti-CD138-APC and rat anti-mouse IgG2a-biotin were purchased from Biolegend (San Diego, CA). Anti-IgM-FITC and the SBA Clonotyping System-B6/C57J-HRP were purchased from Southern Biotech (Birmingham, AL). 4-Hydroxy-3-nitrophenylacetyl (NP)-ficoll, NP-Chicken Gamma Globulin (CGG), NP(24)-PE and NP-BSA were purchased from Biosearch Technologies (Novato, CA).
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8

Flow Cytometry Analysis of Virus-Specific CD8+ T Cells

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Freshly harvested splenocytes and cells cultured for 7 days were stained with anti-CD3ε PerCP/Cy5.5 (Clone: 145-2C11, BioLegend), anti-CD-8 PE-Cy7 (Clone: 53-6.7, eBioscience) and anti-GranzymeB AlexaFluor700 (Clone: GB11, BD Biosciences). A MHC class I peptide tetramer specific for influenza virus NP366-374/Db conjugated to PE was obtained from the Molecular Biology Core Facility at Trudeau Institute (Saranac Lake, NY). Splenocytes and day 7 effectors were incubated on ice for 60 minutes with the Class I tetramer prior to staining with surface antigens on ice for 30 minutes. Cells were permeabilized according to the BD Cytofix/Cytoperm protocol and subsequently stained for intracellular proteins. Data were acquired on the BD LSR II flow cytometer and analyzed using FlowJo 9.3.3 software.
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9

Analysis of Immune Cell Subsets

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For the analysis of cell surface markers, single-cell suspensions from the spleens were prepared 1 week after the last dose of DMBA. Cells were permeabilized by 0.5% (w/v) saponin in PBS (containing 0.25% (w/v) bovine serum albumin and 0.02% (w/v) sodium azide). Splenocytes (macrophages, B cells, CD4+ T cells and CD8+ T cells) were analyzed by staining with an antibody solution containing anti-CD11b-Alexa Fluor 700, anti-B220-Pacific Blue, anti-CD4-Dye647 and anti-CD8-PE/Cy7 (all obtained from eBioscience, Frankfurt, Germany). Tregs were analyzed by staining with anti-CD4-APC/Cy7 and anti-CD25-Dye647 and subsequent incubation with FoxP3 Fixation/Permeabilization working solution (all obtained from eBioscience). Then cells were stained with anti-FoxP3-FITC (eBioscience). All samples were measured using the flow cytometer BD LSR II (BD Biosciences, San Jose, CA, USA).
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10

Dissociation and Flow Cytometry of MDA-MB-436 Tumors

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MDA-MB-436 tumors were collected from huNOG-EXL mice and processed with a Miltenyi MACS Tumor Dissociation Kit on a gentleMACS dissociator (Miltenyi Biotec, Germany), following the manufacturer’s protocol. Single-cell suspensions were labeled with the following antibodies: anti-CD45-eFluor 506 (eBioscience 69–0459–42); anti-CD3-eVolve 655 (eBioscience 86-0037-42); anti-CD4-FITC (eBioscience 11-0049-42); anti-CD8-PE-Cy7 (eBioscience 25-0088-42); anti-FoxP3-eFluor 450 (eBioscience 48-4776-42); anti-Ki67-PerCP-eFluor710 (eBioscience 46-5699-42); and viability dye (eBioscience 65-0865-18). Flow cytometry was performed on an Attune NxT flow cytometer (Thermo Fisher, Waltham, US).
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