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5 protocols using cy5 goat anti rabbit igg

1

Brain Tissue Fixation and Fluorescence Imaging

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After the conclusion of experiments, mice were deeply anesthetized with sodium pentobarbital (120 mg/kg) and then perfused transcardially with 20 mL 0.9% NaCl solution followed by 20 mL paraformaldehyde PBS solution (PFA, 4%, w/v). The brains were fixed in PFA solution overnight and sectioned. Slices were washed with PBS, fluorescence-enhanced with the anti-GFP antibody (FITC, ab6662, Abcam, Cambridge, MA) or c-Fos antibody (226003, Synaptic Systems, Germany) then Cy5 goat-anti-rabbit IgG (111-175-144, Jackson), incubated with DAPI (C1002, 1:1000, Beyotime, Shanghai, China), and later mounted with DAPI. Fluorescence images were then obtained with an epifluorescence microscope (Eclipse 80i, Nikon, Tokyo, Japan) with a 10X (CFI Plan Apo Lambda, 0.45 N.A.) or a 20X (CFI Plan Apo Lambda, 0.75 N.A.) objective lens, and were analyzed with ImageJ software (NIH, U.S.).
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2

Affinity-purified antibodies for CLIC protein detection

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AP255 and AP1089, the affinity-purified rabbit polyclonal antibodies to CLIC4 and CLIC1, respectively, have been previously described [17 (link),32 (link)]. Commercial antibodies were as follows: Goat polyclonal antibody to mouse albumin, Bethyl Labs (Montgomery TX) #A90-134; rat monoclonal antibody to CD31 clone MEC13.3, Pharmingen (San Jose, CA) #550274; mouse monoclonal antibody to PCNA, Cell Signaling Technology (Danvers, MA) #2586; rabbit monoclonal antibody to Smad2/3, Cell Signaling Technology #8685; rabbit monoclonal antibody to phospho-Smad2/3, Sigma-Aldrich #SAB4504208; mouse monoclonal antibody to GAPDH, Santa Cruz Biotechnology (Santa Cruz, CA) #SC-32233; goat polyclonal antibody to CLIC5, Santa Cruz Biotechnology #SC-65041 Alexa Fluor 488 anti rat IgG, Life Technologies (Grand Island, NY); Cy5 goat anti rabbit IgG, Jackson Labs (Bar Harbor, ME) #111-175-144; FITC-lectin from Lotus tetragonolobus (LTA), Vector Labs (Burlingame CA) #FL-1321; Alexa Fluor 594-isolectin B4 from Griffonia simpicifolia (IB4), Life Technologies, #I21413; HRP-conjugated secondary antibodies, Thermo Scientific Pierce.
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3

Viral Vector Constructs and Immunohistochemistry

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AAV2-hSyn-hChR2(H134R)-mCherry (titer: 2.9e12), AAV2-hSyn-mCherry (titer: 4.7e12), and AAV2-hSyn-eNpHR3.0-mCherry (1.5e12) were obtained from the University of North Carolina Vector Core with available stock constructs from the laboratory of K. Deisseroth at Stanford University.
C-Fos antibody (1:5000, Cell Signaling Technology Cat# 4384, RRID:AB_2106617) was a rabbit polyclonal antibody raised against a synthetic peptide corresponding to amino acids near the carboxy-terminus of human c-Fos protein. TH antibody (1:250, Millipore Cat# AB152, RRID:AB_390204) was a rabbit polyclonal antibody raised against denatured tyrosine hydroxylase from rat pheochro-mocytoma. NeuN antibody (1:1000, EMD Millipore Cat# MAB377, RRID:AB_2298772) was a mouse monoclonal antibody, clone A60, selected from immunoglobulins formed against purified cell nuclei from mouse brain. Secondary antibodies used were purchased from Jackson Immuno Research (Westgrove, PA): Cy5 Goat anti-rabbit IgG (1:500, Cat# 111-175-144, RRID:AB_2338013), Alexafluor 594 Donkey anti-rabbit IgG (1:500, Cat# 711-585-152, RRID:AB_2340621), Cy5 Goat anti-mouse IgG (1:500, Cat# 115-175-146, RRID:AB_2338713), and FITC streptavidin (1:200, Cat# 016-010-084, RRID:AB_2337236).
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4

Viral Vector Constructs and Immunohistochemistry

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AAV2-hSyn-hChR2(H134R)-mCherry (titer: 2.9e12), AAV2-hSyn-mCherry (titer: 4.7e12), and AAV2-hSyn-eNpHR3.0-mCherry (1.5e12) were obtained from the University of North Carolina Vector Core with available stock constructs from the laboratory of K. Deisseroth at Stanford University.
C-Fos antibody (1:5000, Cell Signaling Technology Cat# 4384, RRID:AB_2106617) was a rabbit polyclonal antibody raised against a synthetic peptide corresponding to amino acids near the carboxy-terminus of human c-Fos protein. TH antibody (1:250, Millipore Cat# AB152, RRID:AB_390204) was a rabbit polyclonal antibody raised against denatured tyrosine hydroxylase from rat pheochro-mocytoma. NeuN antibody (1:1000, EMD Millipore Cat# MAB377, RRID:AB_2298772) was a mouse monoclonal antibody, clone A60, selected from immunoglobulins formed against purified cell nuclei from mouse brain. Secondary antibodies used were purchased from Jackson Immuno Research (Westgrove, PA): Cy5 Goat anti-rabbit IgG (1:500, Cat# 111-175-144, RRID:AB_2338013), Alexafluor 594 Donkey anti-rabbit IgG (1:500, Cat# 711-585-152, RRID:AB_2340621), Cy5 Goat anti-mouse IgG (1:500, Cat# 115-175-146, RRID:AB_2338713), and FITC streptavidin (1:200, Cat# 016-010-084, RRID:AB_2337236).
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5

Myocilin-Induced Proteasome and Autophagy

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Tet-on inducible RGC5 cell lines were treated with Dox for 24 h to induce moderate expression of wild-type, P370L, or Q368X myocilin-GFP. The total cell lysate was subjected to Western blotting using rabbit anti-PSMB5 (Abcam, Cambridge, MA), rabbit anti-LC3 (MBL, Farmingdale, NY), or rabbit anti-GAPDH. The level of PSMB5 or LC3 normalized to that of GAPDH in induced cells was compared to that in non-induced control cells.
For immunofluorescence, cells induced with Dox were fixed and stained with rabbit anti-PSMB5 or rabbit anti-LC3. Cy5-goat anti-rabbit IgG (Jackson ImmunoResearch, 1∶200) was used as the secondary antibody.
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