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16 protocols using turbo ion spray source

1

Phospholipid Uptake by Neuro2a Cells

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Measurement of phospholipid uptake by Neuro2a cells was performed by using a 4000 quadrupole linear-ion trap (QTrap) equipped with a Turbo Spray ion source (AB Sciex, Darmstadt, Germany) connected to a 1200 Agilent HPLC as published earlier [31 (link),54 (link)].
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2

Comprehensive Lipid Profiling by Mass Spectrometry

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Lipids that were extracted from a 100 μg sample using the solid/liquid lipid extraction method, as described above, were then subjected to a mass spectrometric analysis, which has been described in detail previously [22 (link),25 (link),26 (link),27 (link)]. This shotgun lipidomics process was performed using a 4000-quadrupole linear ion trap (QTrap) equipped with a turbo spray ion source from AB Sciex (Darmstadt, Germany) and coupled to an Agilent HPLC 1200 series autosampler (Santa Clara, CA, USA). The 174 different PCaa, PCae, lyso-PC, carnitine, and TAG species, the 81 different PEaa, PEae, and lyso-PE species, the 45 different PS and lyso-PS species, the 24 different PG species, and the 23 different PI and lyso-PI species were quantified in technical duplicates using the Analyst 1.4.2 software from AB Sciex (Darmstadt, Germany). The exact parameters of the lipid analysis performed in a positive mode were defined in [27 (link)].
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3

Lipid Detection by QTrap Mass Spectrometry

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A 4000-quadropole linear ion trap (QTrap) with a turbo spray ion source (AB Sciex, Darmstadt, Germany) was used for the detection of the different lipid species. Using the Agilent 1200 HPLC autosampler (Agilent, Böblingen, Germany), each sample was measured as a technical duplicate and subsequently analyzed using Analyst 1.4.2. software (AB SCIEX, Darmstadt, Germany) (see a detailed description in [29 (link)]). The detection of different lipid species was carried out using multi-reaction monitoring (MRM) as a scan type with specific parameters (see Table 2) and a measurement time of three minutes for each sample.
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4

Quantitative Lipidomic Analysis by LC-MS

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All measurements were performed using a 4000 quadrupole linear-ion trap (QTrap) mass spectrometer equipped with a Turbo Spray ion source (AB SCIEX, Darmstadt, Germany): The QTrap was connected to a Agilent Cap HPLC comprising of 1200 Capillary Pump, 1200 Micro Wellplate Sampler and 1200 Thermostat Module (Agilent, Böblingen, Germany). Data analysis was carried out using Analyst 1.5 software (AB SCIEX, Darmstadt, Germany). For determination of phosphatidylcholine, phospatidylcholine-plasmalogen, lyso-phosphatidylcholine, sphingomyelin and ceramide levels 20μl sample was injected into sample loop with the following running solvent gradient (0.0–2.4min, 30μl; 2.4–3.0min, 200μl; 3.0min, 30μl). Mass spectrometry settings and composition of running solvents used is specified below.
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5

Liquid Chromatography-Tandem Mass Spectrometry

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The mass spectrometry measurements were performed with the same instrument previously described38 (link). Briefly, the liquid chromatography system was an UltiMate 3000 LC Systems (Dionex, Sunnyvale, CA, USA), with autosampler, binary pump, and column oven (Thermo Fisher Scientific, USA). The tandem mass spectrometer was an AB Sciex 3200 QTRAP LC–MS/MS instrument with electrospray ionization (ESI) TurboIonSpray source (AB Sciex Framingham, MA, USA). Instruments were managed with manufacturers' software and according to manufacturers' instructions. The analytical data were processed by Analyst software (version 1.6.2).
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6

Quantitative MS/MS Analysis of AC1LSPZG

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For the MS/MS analysis, a previously validated method published by our lab was used [49 (link)]. Briefly, a 4000 QTRAP® triple quadrupole mass spectrometer with a Turbo Ion Spray source (AB Sciex, Redwood City, CA, USA) was used in the positive mode. The MRM transitions for the [M + H]+ ion of AC1LSPZG was (m/z 457.10 → 349.00) and that of Griseofulvin (IS) was (m/z 353.27 → 285.10). Representative LC chromatogram for tandem mass spectrometry is shown in Appendix (Figure A4).
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7

Analysis of Phthalate Metabolites in Samples

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Samples were analysed for the five main D4-DEHP metabolites: D4-lablled mono-(2-ethyl-5-hydroxyhexyl) phthalate (5OH-MEHP), mono-(2-ethyl-5-oxohexyl)phthalate (5oxo-MEHP), mono-(2-ethyl-5-carboxypentyl)phthalate (5cx-MEPP) and mono-[2-(carboxymethyl), hexyl]phthalate (2cx-MMHP) [33 (link)]. Extract (1 μL) was injected onto LC-MS/MS. A C18 column (2.1 mm i.d. × 50 mm; Grace Genesis Lighting; Sunrise, FL, USA) was used before the injector to reduce the interference of contaminants during the mobile phase. A C18 column (1.5 μm, 2.0 mm i.d. × 30 mm VisionHT; Grace) was used, and the mobile phases were water and acetonitrile with 0.1% formic acid. The samples were analysed on a Shimadzu UFLC system (Shimadzu Corporation, Kyoto, Japan) coupled to a QTRAP5500 (triple quadrupole linear ion trap mass spectrometer) equipped with a TurboIon Spray source (AB Sciex, Framingham, MA, USA). The samples were analysed in duplicates. The determined LOD for all analysed metabolites were 0.5 ng/mL (D4-MEP), 0.9 ng/mL (D4-MEHP), 0.1 ng/mL (D4-5OH-MEHP), 0.2 ng/mL (D4-5oxo-MEHP), 0.1 ng/mL (D4-5cx-MEPP), and 0.1 ng/mL (D4-2cx-MMHP). For more details, see Supplementary Information (Table S6).
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8

LC-MS/MS Analysis of Steroid Hormones

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Isolated sample fractions were analysed by LC–MS/MS using a PerkinElmer Series 200 high-performance liquid chromatography (HPLC) system coupled to an API5000 triple-quadrupole tandem mass spectrometer fitted with a TurboIonSpray™ source (ABSciex, Concord, ON, Canada). Compounds of interest were separated on a reversed phase C18 column (Xterra® MS C18 column, 100 × 2.1 mm, 3.5 μm, Waters, Milford, MA, USA) protected by a VanGuard® cartridge of the same material (Xterra® MS C18; 5 × 2.1 mm, 3.5 μm, Waters, Milford, MA, USA). The column oven was set at 40°C, and the injection volume was 50 μl. Optimized instrumental conditions are shown in Table 1. With the exception of DHEAs and triclosan, which were analysed in negative electrospray ionization (ESI) mode, steroid hormones and PPCPs were detected in positive ESI mode with multiple reaction monitoring of the two most abundant product ions for each analyte. For each MRM transition, the dwell time was 40 ms and the entrance potential (EP) was 10 volts.
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9

Quantification of Tetracycline Antibiotic by Mass Spectrometry

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The mass spectrometer was operated with an electrospray ionization (ESI) source in positive ion mode using Turbo Ion Spray source (AB Sciex, Foster City, CA, USA). The singly protonated ion of TA and sulphadimethoxine (SDM, IS) were observed at m/z 435.2 and m/z 311.0 in ESI positive ion mode. Fragmentation spectra of TA were recorded, and abundant daughter ions were selected for the analysis. Multiple reaction monitoring (MRM) mode was used for the quantification of TA using SDM as an internal standard. Quantification of TA was performed using precursor-to-product ion transition m/z 435.2/397.2 (quantifier) and m/z 435.2/415.2 (qualifier). The mass transition used for the internal standard (SDM) was m/z 311.0/156.0.
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10

Ion-pair LC-MS/MS Analysis of Ethyl Sulfate

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The analysis of EtS was performed with a previously described methodology based on ion-pair LC-MS/MS (Mastroianni et al., 2014) (link) using a Symbiosis TM Pico System (Spark Holland, Emmen, The Netherlands) equipped with a 100 µL sample loop. The LC system was coupled to a 4000QTRAP hybrid triple quadrupole-linear ion trap (QqLIT) mass spectrometer equipped with a Turbo Ion Spray source (AB-Sciex, Foster City, CA, USA) set in the negative ionization mode (ESI-). Chromatographic separation was performed with a Purospher Star RP-18 endcapped column (125 mm × 2 mm, particle size 5 µm) preceded by a guard column of the same packing material and particle size, both from Merck (Darmstad, Germany) and a mobile phase consisting of MeOH and water both containing 5 mM of dibutylammonium acetate (DBAA) at a constant flow rate of 0.3 mL/min. MS/MS detection was performed in selected reaction monitoring mode (SRM) recording 2 SRM transitions for EtS (125→97, 125→80) and one for EtS-d5 (130→98). Data acquisition and evaluation was performed with Analyst 1.5 software (AB-Sciex, Foster City, CA, USA). Quantification of the samples was based on the isotope dilution method.
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