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2 protocols using pa5 110155

1

Modulation of Inflammatory Pathways

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The reagents used in this study were obtained from the indicated suppliers: IFN-γ, IL-1β, TNF-α, IL-4, IL-13, and TGF-β from R&D Systems (Minneapolis, MN, USA); antibodies against α-SMA (ab7817) from Abcam (Cambridge, UK); antibodies against GAPDH (sc47724) and TSG-6 (sc377277) from Santa Cruz Biotechnology (Santa Cruz, CA, USA); antibodies against STAT1 (9172S), pSTAT1 (9167S), STAT3 (9139S), pSTAT3 (9145S), and Smad2/3 (8685S) from Cell Signaling Technology (Danvers, MA, USA); antibodies against pSmad2/3 (PA5-110155) from ThermoFisher Scientific (Waltham, MA, USA); chemical inhibitors for JAK1 (Abrocitinib, HY-107429; MedChemExpress, Princeton, NJ, USA) and JAK2 (AG-490, S1143; Selleck Chemicals, Houston, TX, USA); scramble and TSG-6 siRNA (Santa Cruz). All other materials were purchased from Sigma-Aldrich (St. Louis, MO, USA) unless otherwise indicated.
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2

Immunohistochemical Analysis of EndMT Drivers

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The immunohistochemistry method was used for all EndMT drivers. Briefly, lung tissue sections were deparaffinised in xylene and ethanol, respectively, followed by antigen retrieval performed at 110 °C for 15 min using target retrieval citrate buffer pH 6.0 (Dako S2369, Mulgrave, VIC, Australia) in a decloaking chamber (Biocare Medical, Pacheco, CA, USA). Primary antibodies were used to stain tissues for 60 min: mouse monoclonal TGF-β1 (1:2000, Abcam ab27969, Melbourne, VIC, Australia), polyclonal phospho-Smad2/Smad3 (pSmad-2/3, 1:100, ThermoFisher PA5-110155, Scoresby, VIC, Australia), mouse monoclonal Smad-7 (1:50, Santa Cruz Biotechnology sc-101152, Dallas, TX, USA), and rabbit monoclonal anti-β-catenin (1:100, Abcam ab32572, Melbourne, VIC, Australia), followed by secondary HRP rabbit/mouse antibodies (Dako K5007, Mulgrave, VIC, Australia). The DAB substrate (Dako K5007, Mulgrave, VIC, Australia) was added to make the protein markers visible, and hematoxylin (Australian Biostain P/L, Traralgon, Australia) was used to counterstain the nucleus. We have previously published using these techniques [4 (link),11 (link),12 (link),13 (link),14 (link),15 (link),16 (link),17 (link)].
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