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9 protocols using gelatin

1

Co-culture Transwell Barrier Assay

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A co-culture model was constructed using a trans-well chamber assay with a top chamber made of an 8 µm pore-size polycarbonate membrane coated with 1% gelatin (Corning Costar, Corning, NY, USA). The HepG2 and Detroit 551 cell lines were plated at 1 × 105 cells/well in a culture medium with 10% FBS and 1% penicillin and streptomycin in the lower compartment. The upper compartment was filled with 300 µL of culture medium containing HaCaT cells (2.38 × 106 cells/mL) to form a barrier and prevent direct contact between hGH or TAT-hGH and the HepG2 and Detroit 551 cell lines. The cells were incubated for attachment and stability for 12 h, after which the media in both compartments was replaced with fresh medium without FBS. hGH or TAT-hGH of various concentrations were added to the upper compartment. The cells were incubated for an additional 18 h. The cells from the lower compartment were harvested, and total RNA was extracted using 100 µL of TRIzol reagent according to the manufacturer’s protocol. The cells in the upper compartment were fixed and stained with the Diff Quick kit (Sysmex, Kobe, Japan) to confirm complete coverage of the HaCaT cell line.
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2

Cancer Cell Migration Assay

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Cell migration assays were performed using 8.0 µm pore size coated with 0.5% gelatin (Costar). The lower chamber contained 15% serum as a chemoattractant. Cancer cells were prepared in serum-free medium, and 5×10 4 cells were added to the upper chamber in migration buffer (M199 containing 0.1% BSA). After 4 h of incubation at 37°C, cells were removed from the upper surface of the membranes with a cotton swab, and cells that migrated to the lower surface were xed with 4% paraformaldehyde for 30 mins and then stained with 0.1% crystal violet for 10 mins. Migrated cells were counted under a microscope.
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3

TIRFM and Confocal Imaging of Cells

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TIRFM was performed as previously described (14 (link)). Briefly, 22×22mm coverslips were acid-washed and coated with 0.2mg/mL gelatin (Corning, #2850–22). For all imaging, a 60x Nikon 1.49 NA TIRFM DIC objective (Nikon) was used combined with an additional 1.8x tube lens (yielding a final magnification of 108x), mounted on a Ti-Eclipse inverted microscope with Perfect Focus System (Nikon). TIRFM illumination was achieved using an Andor “Diskovery Platform/borealis widefield illuminator”. Time-lapse series were acquired at a penetration depth of 80 nm and a frame rate of 1Hz using a PCO-Edge 5.5 sCMOS camera. During imaging, cells were maintained at 37°C in DMEM/F12 supplemented with 10% fetal bovine serum.
Confocal images were acquired with a similar setup as described above, using a 50 μm pinhole disk and an Andor Zyla 4.2 sCMOS camera.
Both microscopes have a custom-built full body environmental chamber with temperature control and CO2 stage incubator operated by Bold Line controller and OKO-Touch with SmartBox for data logging, and Molecular Devices MetaMorph software.
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4

Substrate Effects on tdASC Transdifferentiation

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To examine different substrates’ effects on NPCs transdifferentiation of tdASC, the treated cell culture dishes (Corning) were coated with the following substrates (all obtained from Sigma-Aldrich except if otherwise mentioned): gelatin, poly-d-lysine, human laminin, type I collagen, and Matrigel (Corning). In brief, tdASC was dissociated with Accutase (Life Technologies) and plated on different matrix tissue culture plates (Corning Inc.) Matrix detail as follows: 0.1% gelatin was prepared with sterile ddH2O and was used at 200 μL/cm2. Type 1 collagen was used at 0.25~1 mg/cm2. Poly-d-lysine was dissolved with sterile ddH2O. The poly-d-lysine solution was added to plates at a concentration of 0.1–1 mg/mL and left at room temperature overnight. Laminin was prepared at 10–100 μg/mL in PBS, and laminin was diluted to 1 µg/mL in DPBS, and then 1 mL of solution added to 6 well-plates and keep at 37 °C for 2 h or at 4 °C for 24 h.
For laminin/poly-d-lysine coating as described above, dishes were pretreated with poly-d-lysine at room temperature overnight and then laminin was added at 1 μg/mL in DPBS at 37 °C for 2 h, then the excess substrate was removed and dishes were rinsed with PBS.
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5

Transendothelial Electrical Resistance Assay

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TEER assay was conducted as previously reported,25 with some modifications. The TEER values of the EC monolayer were measured using transwell chambers. MS1 cells were seeded into the upper compartment pre‐coated with 1.5% gelatin (Corning, Life Sciences) to form an EC monolayer. S. mutans at an MOI of 1 was added to stimulate the MS1 cells and TEER values were measured using a Millicell@ERS‐2 Electrical Resistance System (EMD Millipore Corporation, Billerica, MA, USA) at the indicated time points. The TEER values of the monolayer were calculated using the formula resistance (monolayer) = membrane area × [resistance (sample) − resistance (blank)].
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6

Transwell Assay for Cell Migration and Invasion

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The migration or invasion Transwell assays were conducted using 24-well Gelatin- or Matrigel-coated Transwell chambers (8-μm pore size, Corning Coster). At 24 h after transfection, the cells were seeded into the upper chamber and cultured with OPTI-MEM (Gibco) without FBS in a humidified incubator at 37 °C. For the migration assay, the seeding density was 1 × 105 cells/well. For invasion assay, the seeding density was 0.75 × 105 cells/well. The bottom chamber contained the complete medium containing 20% FBS. After migration for 12 h or invasion for 24 h, the filters were rinsed with PBS and fixed in the Hema3® fixative (Fisher Scientific) for 30 min. The non-invaded/non-migrated cells in the upper chamber were removed gently, and the filters were stained with the Hema3® solution I and II for 30 min in accordance with the manufacturer’s instructions. Lastly, the filters were mounted onto the slides with gridded coverslips and counted under an optical microscope (OLYMPUS IX51).
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7

Culture of Human Retinal Endothelial Cells

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Human retinal microvascular endothelial cells (HRMECs) were from American Type Culture Collection (ATCC, Manassas, VA), and HRMECs at 4 to 8 passages were used in this experiment. The cells were cultured in pre-coated flasks with gelatin (Corning, NY, USA). The cells were cultured in endothelial basal medium (Lonza; Walkersville, MD, USA) supplemented with 10% fetal bovine serum (FBS), 100 U/mL penicillin and 100 μg/mL streptomycin and EC growth supplements (Lonza; Walkersville, MD, USA). The 293T cells were cultured in DuIbecco’s modified eagIe’s medium (DMEM) with 10% FBS, 100 U/mL penicillin and 100 μg/mL streptomycin. The cells were cultured at 37°C and 5% vol CO2, and the culture medium was replaced once every three days.
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8

HUVEC Shear Stress Response Analysis

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HUVECs were seeded on a 100 mm TC-Treated Cell Culture Dish (Cat. No. 353003; Corning, NY, USA) coated with 0.1% gelatin (Cat. No. G1393; Sigma) and cultured to confluence in EGM-2 medium (Cat. No. cc3162; Lonza, Basel, Switzerland). Cell dishes were set up into a cone plate flow system that sheared at 15 dynes/cm2 for laminar flow or ±5 dynes/cm2 and 1 Hz frequency for oscillating flow for 24 h. The flow system was kept at 37 °C temperature and 95% humidified air with 5% CO2. Cells were then washed in PBS and further processed for Western blot, RNA extraction, or flow cytometry analysis.
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9

Gelatinase Activity Assay in L929 Cells

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L929 cells were seeded into 6-well plates at a density of 5.0×106 cells/well and then incubated with serum-free medium at 37°C for 24 h. Culture supernatants were collected and electrophoresed using 10% SDS-PAGE containing 2% gelatin (Corning, Inc.). After washing, the gel was cultured with a buffer that contains 5 mM CaCl2 and 1 µM ZnCl2 at 37°C for 48 h. Afterwards, the gel was stained with Coomassie Blue R250 at room temperature for 3 h and decolorized with a solution that contained 5% methanol and 10% acetic acid. The band was scanned using Image Scanner (ChemiDoc MP; Bio-Rad, Laboratories, Inc.) and analyzed using ImageJ v1.5.1 (National Institutes of Health).
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