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6 protocols using anti snrnp70

1

Quantifying XIST Expression via RIP

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RNA immunoprecipitation (RIP) experiment was conducted using Magna RIP RNA‐binding protein immunoprecipitation kit (Millipore, Billerica, MA, USA) and the Ago2 antibody (Abcam, Cambridge, MA, USA) according to the manufacturer's instruction. The expression of XIST was analysed by qRT‐PCR. Normal mouse IgG (Abcam, USA) and anti‐SNRNP70 (Abcam, USA) were, respectively, used as negative control and positive control.
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2

Antibody Validation for Epigenetic Analysis

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Antibodies were purchased from the following companies: anti‐H3K27me1, anti‐H3K27me3, anti‐H3K79me1, anti‐H3K79me2, anti‐histone H3, anti‐hnRNP I, anti‐KDM4A, anti‐KDM5A, anti‐KDM5C, anti‐snRNP70, anti‐tubulin, and anti‐U2AF2 from Abcam (Cambridge, MA, USA); anti‐hnRNP A2/B1 from Acris (San Diego, CA, USA); anti‐SR protein‐specific kinases (SRPK)1 and anti‐SRPK2 from BD Biosciences (San Diego, CA, USA); anti‐AKT, anti‐H3K27me2, anti‐protein phosphatase‐1 (PP1), anti‐phospho‐PP1 at Thr320, anti‐phospho‐AKT at Ser473, and anti‐cleaved‐CASPASE‐3 from Cell Signaling Technology (Billerica, MA, USA); anti‐H3K4me1, anti‐H3K4me2, anti‐H3K4me3, and anti‐H3K36me3 from Millipore; anti‐pro‐CASPASE‐3 and anti‐KDM7A from GeneTex (SanAntonio, TX, USA); anti‐hnRNP C1/C2, anti‐BAX, and anti‐BCL2L1 from Santa Cruz Biotechnology (Santa Cruz, CA, USA); anti‐hnRNP A1 from Sigma; and anti‐SRSF1 and anti‐SRSF3 from Zymed (San Francisco, CA, USA).
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3

Ago2 RNA Immunoprecipitation Protocol

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RNA immunoprecipitation was performed using thermo fisher RIP kit (Thermo, USA) based on the manufacturer's protocol. The Ago2 antibodies were purchased from Abcam (USA). Normal mouse IgG (Abcam, USA) was applied as negative control and anti- SNRNP70 (Abcam, USA) was employed as positive control for the RIP procedure. Purified RNA was subjected to qRT-PCR analysis to demonstrate the presence of the binding targets using respective primers.
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4

Ago2 RNA Immunoprecipitation Protocol

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RNA immunoprecipitation was performed using thermo fisher RIP kit (Thermo, USA) based on the manufacturer’s protocol. The Ago2 antibodies are purchased from Abcam (USA). Normal mouse IgG (Abcam, USA) was applied as negative control and anti-SNRNP70 (Abcam, USA) was employed as positive control for the RIP procedure. Purified RNA was subjected to qRT-PCR analysis to demonstrate the presence of the binding targets using respective primers.
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5

Ago2 Protein-RNA Immunoprecipitation Assay

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RNA immunoprecipitation was performed using thermo fisher RIP kit (Thermo, USA) based on the manufacturer's protocol. The Ago2 antibodies were purchased from Abcam (USA). Normal mouse IgG (Abcam, USA) was applied as negative control and anti-SNRNP70 (Abcam, USA) was employed as positive control for the RIP procedure. Purified RNA was subjected to qRT-PCR analysis to demonstrate the presence of the binding targets using respective primers.
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6

SUMO2 Antibody Production and Validation

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SUMO hybridoma SUMO2 8A2, were procured from Developmental Studies Hybridoma Bank, created by the NICHD of the NIH and maintained at The University of Iowa, Department of Biology (http://dshb.biology.uiowa.edu/) and supernatant was produced in Pichler lab. The SUMO2 antisera were used at 1:100. All other primary antibodies were purchased and validated by the manufacturers (data available on manufacturers’ websites). They were used at the indicated dilutions; anti-NELFA (goat polyclonal, sc-23599 (A-20), Santa Cruz Biotechnology) at 1:1,000, anti-NELFC/D (mouse monoclonal, sc-393972 (C-10), Santa Cruz Biotechnology) 1:1,000, anti-NELFE (rabbit polyclonal, sc-32912 (H-140), Santa Cruz Biotechnology) at 1:1,000, anti-SNRNP70 (rabbit polyclonal, ab83306, Abcam) at 1:1,000, anti-ZNF451 (rabbit polyclonal, A305-177A, Bethyl Laboratories inc), anti-RPB3 (rabbit polyclonal, ABE999, Millipore) at 1:1,000, and anti-Histone H3 (rabbit polyclonal, ab70550, Abcam) at 1:5,000. Secondary antibodies against goat, rabbit or mouse proteins were horseradish peroxidase conjugated and were typically used at 1:10,000 dilution. Anti-rabbit (NA934V) and anti-mouse (NA931V) antibodies were purchased from GE healthcare. Anti-goat (sc-2354) antibody was purchased from Santa Cruz Biotechnology.
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