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26 protocols using dumont 5

1

Retinal Ganglion Cell Injury Model

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All animal procedures were approved by The University of Alabama at Birmingham institutional animal use and care (IACUC) committee and in accordance with the statement for the Use of Animals in Ophthalmic and Vision Research by The Association for Research in Vision and Ophthalmology (ARVO). C57BL/6J mice were purchased from Jackson Laboratory (Bar Harbor, ME). An equal number of female and male mice were used in this study. For all procedures, mice were anesthetized with ketamine (100 mg/kg) and xylazine (10mg/kg).
To induce injury to RGCs, mice were either intravitreally injected with 1μl of 20mM N-Methyl D aspartic acid (NMDA) or underwent optic nerve crush (ONC) surgery as previously described (Guo et al., 2021 (link)). Briefly, for ONC, fine tweezers (Dumont#5; Fine Science Tools (FST) Item No. 11254-20 or Dumont#55; FST Item No. 11255-20) were used to create a small incision in the conjunctiva and then maneuvered between extraocular muscles to access the optic nerve, which was gently squeezed for 5 seconds at a location approximately 1mm posterior to the globe using Dumont #5 tweezers.
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2

Optic Nerve Crush Procedure

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For the ONC procedure, the left optic nerve was exposed intraorbitally by blunt dissection. The optic nerve was crushed with forceps (#5 Dumont, Fine Science Tools) for 10 s ~ 1 mm distal to the emergence from the globe (Luo et al., 2016 (link); Park et al., 2008 (link)). Animals received optic nerve crush 3 to 14 days after AAV injection as indicated for each experiment. Sham surgery involved exposure of the optic nerve without nerve crush.
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3

Optic Nerve Crush Procedure

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For the optic nerve crush procedure, the left optic nerve was exposed intra-orbitally by blunt dissection. The optic nerve was crushed with forceps (#5 Dumont, Fine Science Tools) for 10 seconds ~1 mm distal to the emergence from the globe. Animals received optic nerve crush at various time points after AAV injection as indicated for each experiment. For animals with quantification of RGC number, sham surgery was performed on the contralateral (right) side. Sham surgery involved exposure of the optic nerve without nerve crush. These contralateral eyes are referred in the main text as “Sham (uninjured)” retina. Following various time points after crush, animals were humanely euthanized and tissues processed for further analyses. Time points are indicated in each figure legend and described also in the main text.
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4

Mosquito Dissection and RNA Extraction

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Adult and larval mosquitoes were anesthetized on ice, and then grasped with forceps (Dumont #5; Fine Science Tools, Inc., Foster City, CA) either at the thorax to remove the legs and heads (adults) or one segment posterior to the head (larvae) to remove the head. The insect was then submerged in a mosquito Ringer solution consisting of the following in mM: 150 NaCl, 3.4 KCl, 1.7 CaCl2, 1.8 NaHCO3, 1 MgCl2, 5 Glucose, 25 HEPES. The pH of the Ringer solution was adjusted to 7.1 with NaOH before use and the desired osmolality was verified (330 ± 5 mOsm/kg) with a vapor pressure osmometer (Wescor, Logan, UT). The second to last abdominal segment was grasped with forceps and gently pulled away from the rest of the abdomen, bringing with it the alimentary canal and gonads. Tissues of interest were isolated and placed into separate 1.5 ml sterile microcentrifuge tubes (USA Scientific; Orlando, FL) containing the mosquito Ringer solution on ice. For whole insect samples, dissection was unnecessary. Once all mosquito samples were collected, the Ringer solution was aspirated and replaced with TRIzol® (Life Technologies, Carlsbad, CA) before storing at −80°C.
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5

Rapid-Throughput Limb Tissue Dissection

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Hindlimbs from WT and mutant mice were skinned and fixed for 24–30 h in 10% neutral buffered-formalin, rinsed twice, and stored in 70% ethanol at 4 °C. Samples were anonymized and randomly assigned to batches for rapid-throughput analysis. Prior to analysis, limbs were rehydrated in PBS + 0.02% sodium azide for >24 h. Soft tissue was removed and the knee joint was disarticulated under a Leica MZ9 dissecting microscope (Leica Microsystems, UK) with the aid of fine forceps (Dumont #5, Cat#11252-20; Fine Science Tools, Germany) and 5 mm spring scissors (Vannas Tubingen, Cat#15003-08, Fine Science Tools, Germany).
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6

Intravitreal Injection and Optic Nerve Crush Model

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Intravitreal injections of AAV2 viruses, ONC, and RGC axon labeling were performed as previously described (Park et al., 2008 (link)). Animals were first anesthetized, 1.5 μl of AAV2 virus or Alexa Fluor 555-conjugated CTB (1 μg/μl, Thermo Fisher Scientific, Waltham, MA, USA) was then injected into their right vitreous humor with a Nanoliter syringe. CTB-555 injection was performed 2 days before the mouse was sacrificed to trace regenerating RGC axons. The optic nerve was exposed intraorbitally and crushed with forceps (Dumont #5, Fine Science Tools) for 5 s approximately 1 mm behind the optic disc. The mice were transcardially perfused with 4% paraformaldehyde (PFA). Dissected right optic nerve and bilateral retinas were post-fixed in 4% PFA overnight. pCMV-GFP and pCMV-Cre were from Vigene Bioscience. The titers of AAV2-CMV-Cre and AAV2-CMV-GFP were 1.62 × 1013 vg/ml and 3.2 × 1013 vg/ml, respectively.
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7

Intravitreal AAV Injection and Optic Nerve Crush

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Mice were anesthetized by xylazine and ketamine based on their body weight (0.01 mg xylazine/g+0.08 mg ketamine/g). For each AAV intravitreal injection, a micropipette was inserted into the peripheral retina of 3 week-old mice just behind the ora serrata, and advanced into the vitreous chamber so as to avoid damage to the lens. Approximately 2 µl of the vitreous was removed before injection of 2 µl AAV into the vitreous chamber. ON crush was performed 2 weeks following AAV injection: the ON was exposed intraorbitally and crushed with a jeweler’s forceps (Dumont #5; Fine Science Tools, Forster City, California) for 5 s approximately 0.5 mm behind the eyeball. Care was taken not to damage the underlying ophthalmic artery. Eye ointment containing neomycin (Akorn, Somerset, New Jersey) was applied to protect the cornea after surgery.
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8

Optic Nerve Crush Injury Protocol

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ONC was performed 2 weeks following AAV injection when mice were about 7–8 weeks of age. The optic nerve was exposed intraorbitally at the 12 o’clock position while care was taken not to damage the underlying retro-orbital sinus, and crushed with a jeweler’s forceps (Dumont #5; Fine Science Tools, Foster City, California) for 5 seconds approximately 0.5 mm behind the eyeball. Eye ointment containing neomycin (Akorn, Somerset, New Jersey) was applied to protect the cornea after surgery.
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9

Optic Nerve Crush Injury in Mice

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Mice were anesthetized by xylazine and ketamine based on their body weight (0.01 mg xylazine/g + 0.08 mg ketamine/g). Optic nerves of both sides were sequentially exposed intraorbitally and crushed with a jeweler’s forceps (Dumont #5; Fine Science Tools) for 2 s approximately 0.5 mm behind the eyeball. Care was taken not to damage the underlying ophthalmic artery. Erythromycin Eye Ointment was applied to protect the cornea after surgery.
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10

Optic Nerve Crush and Retrograde Tracing

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Experimental procedures were performed in compliance with animal protocols approved by the Animal and Plant Care Facility at the Hong Kong University of Science and Technology. C57BL/6 mice of 5–6 weeks of age were anesthetized with ketamine (80 mg/kg) and xylazine (10 mg/kg) and received Meloxicam (1 mg/kg) as analgesia after the surgery. AAV-vectors (serotype 2/2, titer 1 × 1012 vg/ml, 2 μl injection volume) expressing either Cpeb1-HA or Gfp under the neuron-specific human synapsin promoter (hSyn) were injected into the left vitreous bodies of 12 mice with a Hamilton microsyringe. Five weeks after vector injection, the optic nerve was gently exposed intraorbitally and crushed with jeweler's forceps (Dumont #5; Fine Science Tools) around 1 mm behind the optic disk. Mice were kept for 2 weeks after injury before tracing. To visualize RGC axons in the optic nerve, 1.5 μl cholera toxin β subunit conjugated with Alexa555 (CTB555, 2 μg/μl, Invitrogen) were injected into the vitreous bodies. Two days after the CTB injection, animals were sacrificed by transcardial perfusion for histology examination. In each mouse, the completeness of optic nerve crush was verified by showing that anterograde tracing did not reach the superior colliculi.
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