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13 protocols using ab7097

1

Western Blot Analysis of EMT Markers

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Transfected HCCLM3 and PLC5 cells were lysed utilizing RIPA buffer (Beyotime, Shanghai, China). The quality of protein samples was assessed via BCA method. Then, the samples were separated by SDS–PAGE, followed by being transferred to PVDF membranes. The membranes were blocked with 5% skimmed milk powder blocking solution at room temperature for 2 h. Afterwards, the membranes were incubated with primary antibodies against E-cadherin (1:10000; ab40772, Abcam, USA) N-cadherin (1:1000; ab76057, Abcam), vimentin (1:1000; 741, Cell Signaling Technology, USA), BICD2 (1:1000; ab237616, Abcam), and GAPDH (1:1000; ab181602, Abcam) overnight at 4°C, followed by being incubated with HRP-conjugated secondary antibodies (1:1000; ab7097, Abcam) at room temperature lasting 2 h. Enhanced chemiluminescence kit (Beyotime) was used for visualizing the protein bands. The grayscale density was measured by ImageJ software.
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2

Curcumin Modulates NF-κB Pathway in Chondrocytes

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Curcumin and collagenase II were obtained from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany) and a 10 mM stock solution was prepared in dimethyl sulfoxide, and diluted with cell culture medium immediately prior to use.
Cells were maintained in Dulbecco's modified Eagle's medium (DMEM; Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) supplemented with 10% fetal bovine serum (FBS; Gibco; ThermoFisher Scientific, Inc.) and 100 IU/ml penicillin, 100 mg/ml streptomycin at 37°C in a humidified atmosphere of 95% air and 5% CO2.
Recombinant human IL-1β was supplied by PeproTech, Inc. (Rocky Hill, NJ, USA). Primary antibodies against type II collagen (AB746) and MMP-13 (AB39012) were purchased from Abcam (Cambridge, UK). Primary antibodies against NF-κB inhibitor α (IκBα; 4814S), phosphorylated (p)-IκBα (9246S) and NF-κB p65/RelA (8242S) were provided by Cell Signaling Technology, Inc. (Danvers, MA, USA). The selective NF-κB inhibitor pyrrolidine dithiocarbamate (PDTC), primary antibodies against GAPDH (AB8245) and lamin B1 (AB16048), and horseradish peroxidase (HRP)-conjugated secondary antibody (AB7097) were obtained from Abcam. Cell culture reagents were purchased from Gibco (Thermo Fisher Scientific, Inc.).
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3

Protein Isolation and Quantification

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Total protein was isolated from cells by RIPA (Sigma-Aldrich) on ice. The supernatants were centrifuged at 12 000g for 10 minutes at 4°C before the collection of the supernatant proteins. The concentration of protein in each sample was measured by the BCA kit (Sigma-Aldrich). Each protein sample (15 µg) was separated by the SDS-PAGE and transferred onto a PVDF membrane. Then the PVDF membrane was blocked by 5% fat-free milk at 37°C for 1 hours, incubated with primary antibodies against IL-1β (ab200478; RRID:AB_2888939; 1:1,000; Abcam), TNF-α (ab205587; RRID:AB_2889389; 1:1,000; Abcam), MAPK6 (ab53277; RRID:AB_2140288; 1:1,000; Abcam) and GAPDH (ab181602; RRID:AB_2630358; 1:1,000; Abcam) at 4°C overnight; and HRP-conjugated goat anti-rabbit secondary antibody (ab7097; RRID:AB_955411; 1:3,000; Abcam) at 37°C for 1 hours, successively. At last, the protein bands were visualized by ECL Kit (Pierce). Immunodetection was analyzed by Image Lab version 3.0 (Bio-Rad Laboratories, Inc.). IL-1β, TNF-α, and MAPK6 were referred to as GAPDH.
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4

Western Blot Analysis of Kidney Proteins

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Kidney tissue was added to RIPA lysate (Thermo Fisher Scientific, United States) containing phosphatase inhibitor and protease, followed by being disrupted by an ultrasound. Then, the sample was centrifuged at 14,000 g at 4°C for 15 min, and the supernatant was collected. The BCA protein detection kit (Pierce, United States) was utilized for measuring the protein concentration. 20 μg protein was loaded. After 10% sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis, the product was transferred to a polyvinylidene fluoride (PVDF) membrane (Millipore, Germany). The membrane was blocked with 5% bovine serum albumin at 37°C for 2 h, and was incubated with primary antibodies overnight at 4°C. Antibodies included EIF4B (1/10000; ab134138; Abcam, United States), RICTOR (1/1000; ab219950; Abcam, United States), PRKCB (1/2000; ab195039; Abcam, United States), and GAPDH (1/10000; ab8245; Abcam, United States). After being washed 3 times with TBST, the membrane was incubated with HRP-labeled secondary antibody (1/2000; ab7097; Abcam, United States) for 2 h at 37°C. After being washed three times, the protein expression was detected by a gel quantitative analysis system following treatment with ECL (Solarbio, Beijing, China) with GAPDH as the reference control.
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5

Monoclonal and Polyclonal Antibody Profiling

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The following monoclonal antibodies (mAbs) and polyclonal antibodies (pAbs) were used in this study: rat anti-mouse F4/80 mAb (1:50, clone BM8, T-2028, BMA Biomedicals, Switzerland); rat anti-mouse B7-1/CD80 mAbs (1:100, R&D Systems, clone, 111114; Minneapolis, MN); rabbit anti-mouse CD206 pAbs (1:1000, ab64693, Abcam, Cambridge, UK); mouse anti-human CD68 mAb (1:100, clone PG-M1, M0876, DAKO); rabbit anti-human iNOS pAbs (1:500, GTX124210, GeneTex, Alton Pkwy Irvine, CA); mouse anti-human CD163 mAb (1:200, clone, 10D6; Leica Biosystems, Buffalo Grove, IL); goat anti-mouse IgG (HRP) preabsorbed (1:200, ab97040, abcam, Cambridge, UK); goat anti-rabbit IgG (HRP) preabsorbed (1:200, ab7090, abcam); and goat anti-rat IgG (HRP) preabsorbed (1:200, ab7097, abcam).
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6

Western Blot Analysis of Spinal Cord

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Briefly, total protein extract was prepared by homogenizing the ipsilateral L3-L6 spinal cord tissues using RIPA lysis buffer and protease inhibitor cocktail. The protein concentration was measured using the BCA Protein Assay Kit. Equal amount of each protein was separated on SDS-PAGE gels and transferred to PVDF membranes. After blocking with 5% BSA at room temperature for 1 h, the membranes were incubated at 4°C overnight with the appropriate primary antibody: GFAP, IBA-1, or β-actin (4970, CST, United States). The membranes were then washed and incubated with horseradish peroxidase (HRP) conjugated secondary antibodies (ab7097, Abcam, United States) for 1.5 h at room temperature. Reactive bands were visualized using the super ECL plus kit and captured using a gel imaging system.
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7

Western Blot Analysis of Apoptosis Markers

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The protein expression of Bax, Bcl-2 and caspase-3 was detected by western blot analysis. Five rats from each group were randomly selected and anaesthetized, and the brain tissues were quickly isolated. The hippocampus was rapidly separated on ice and then quickly frozen and stored at −80°C for further use. The hippocampus was homogenized with radioimmunoprecipitation assay lysis buffer. The proteins were then separated by 10% SDS-PAGE and transferred onto PVDF membranes. At room temperature, the membranes were blocked with 5% skim milk for 2 h and then incubated with primary antibodies overnight at 4°C. The antibodies were as follows: caspase-3 (1:2,000, Abcam, ab13847), Bcl-2 (1:1,000, ab196495, Abcam), Bax (1:2,000, Abcam, ab32503), and β-actin (1:2,000, Abcam, ab179467). At room temperature, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies (1:3,000 diluted, Abcam, ab7097) for 1 h after several washes. We detected the proteins using a chemiluminescence system. Quantity One software (https://download.csdn.net/download/sinat_29367613/8846211) v4.62 was used to quantify the protein bands. All relative optical densities were normalized to β-actin.
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8

Western Blot Analysis of PD-L1 Expression

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The cells were lysed in radioimmunoprecipitation assay (RIPA) buffer (Beyotime, China) plus a protease inhibitor cocktail, followed by protein quantification utilizing the bicinchoninic acid (BCA) method. The lysates were subjected to sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto the polyvinylidene difluoride (PVDF) membrane. The membrane was immersed in 5% skim milk and probed with PD-L1 (1/1000; ab213480; Abcam, Waltham, MA, USA) and GAPDH (1/2500; ab9485; Abcam) overnight at 4°C. Afterward, a secondary antibody (1/5000; ab7097; Abcam) was applied to the membrane. Protein bands were visualized utilizing an enhanced chemiluminescence (ECL) substrate (Solarbio, Beijing, China).
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9

Western Blot Analysis of Cell Signaling Proteins

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Total proteins were extracted from tissue or cell specimens utilizing RIPA lysis, which were determined with BCA kit. 20 μg proteins was separated via 10% SDS-PAGE and transferred onto PVDF membranes. After being blocked, they were incubated at 4°C for 12 h with primary antibodies against HOXA1 (1 : 1000; ab72591; Abcam, USA), Nrf2 (1 : 1000; 16396-1-AP; Proteintech, China), HO-1 (1 : 1000; 27282-1-AP; Proteintech, China), CD155 (1 : 1000; ab267389; Abcam, USA), and β-actin (1 : 5000; ab179467; Abcam, USA), followed by incubation with secondary antibodies (1 : 5000; ab7090 or ab7097; Abcam, USA) at room temperature for 2 h. Protein band was visualized with ECL kit. Protein expression was quantified utilizing ImageJ software, with β-actin as the loading control.
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10

Cardiac Protein Expression Analysis

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Total protein was extracted from the left ventricular myocardium utilizing Total Protein Extraction Kit (Solarbio). Protein samples were separated by 10% sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) gel electrophoresis and transferred onto the nitrocellulose membranes. The membranes were incubated with the primary antibodies, anti-atrial natriuretic peptide (ANP) (1:1,000 dilution; PA5-29559, Thermo Fisher Scientific, Waltham, MA, USA), anti-β-myosin heavy chain (β-MHC) (1:1,000 dilution; ab37484, Abcam, Cambridge, MA, USA), anti-STIM1 (1:1,000 dilution; MA1-19451, Thermo Fisher Scientific, Waltham, MA, USA), anti-Orai1 (1:1,000 dilution; ab111960, Abcam, Cambridge, MA, USA) at 4 °C overnight after blocking with 5% skimmed milk. The membranes were stained with horseradish peroxidase (HRP)-conjugated anti-rabbit IgG antibody (1:5,000; ab270144, Abcam, Cambridge, MA, USA) or HRP-conjugated anti-rat IgG antibody (1:5,000; ab7097, Abcam, Cambridge, MA, USA) at room temperature. GAPDH antibody (1:5,000; ab8245, Abcam, Cambridge, MA, USA) served as internal control. The bands were developed by enhanced chemiluminescence reagent (Yeasen, Shanghai, China), and the data were analyzed by Image J software. The resulting ratios, expressed as fold change, were used to compare relative protein levels across the samples on blots.
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