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5 protocols using sircol collagen standard

1

Neocartilage Composition Analysis Protocol

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Neocartilage samples were removed from the outer and inner regions of the ceramic for histological examination from both OC Assembly groups. Samples from the outer region were taken from the outer circumferential periphery of the neocartilage, no more than 3 mm away from the edge (Fig. 1). Samples from the inner region were taken from the exact middle of the neocartilage. All samples were weighed to obtain wet weights WW, lyophilized for 3 days, and weighed again to obtain dry weights. Samples were then digested with 125 µg/mL papain (Sigma), 5 mM N-acetyl-L-cysteine (Sigma), and 5 mM EDTA (Acros Organics) in phosphate buffer overnight at 60 °C. Sulfated GAG content was measured using the Blyscan GAG Assay kit (Biocolor). DNA content was measured with a Picogreen assay. Total collagen content was determined by measuring hydroxyproline content using a modified chloramine-T colorimetric assay54 (link). A standard curve was generated using a Sircol collagen standard (Biocolor). GAG and collagen content were normalized to wet weight, dry weight, and DNA content. All biochemical measurements were performed on distinct samples.
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2

Quantifying Extracellular Matrix Components

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Biochemical samples were weighed wet, frozen, then lyophilized. Dry weights (DW) were taken after lyophilization to determine water content. Samples were digested in 125µg/mL papain (Sigma) (18 hrs, 65°C). Sulfated GAG content was determined with the Blyscan Glycosaminoglycan Assay (Biocolor). Total DNA content was analyzed with a PicoGreen assay (Invitrogen) and converted to total cell number assuming 7.7pg DNA/cell. Total collagen content was quantified with a modified chloramine-T hydroxyproline assay (Woessner, 1961 (link)). Sircol collagen standard (Biocolor) was used to generate a standard curve reflecting the collagen amount.
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3

Extracellular Matrix Composition Analysis

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Samples were weighed, lyophilized for 72 hours, weighed again, and digested in 125 μg/ml papain solution (Sigma), 2mM N-acetyl cysteine (Sigma), and 2mM EDTA (Sigma)) in phosphate buffer (50 mM, pH = 6.5) at 65°C for 18 hours. Total DNA was quantified using PicoGreen dsDNA reagent (Invitrogen). Total GAG content was measured using a Blyscan assay kit from Biocolor, and total collagen content was quantified using a modified colorimetric chloramine-T hydroxyproline assay.[28 (link)] For the collagen assay, a Sircol collagen standard (Biocolor) was used to create a standard curve.
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4

Biochemical Analysis of Cell-Seeded Constructs

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Samples portioned for biochemical analysis were weighed wet before freezing and lyophilizing. Samples were weighed dry before digestion in 125 μg/mL papain (Sigma-Aldrich) for 18 hrs at 65°C. A PicoGreen assay (Invitrogen, Carlsbad, CA, USA) was used to assess total DNA content in constructs and converted to total cell number assuming 7.7 pg DNA/cell. Total GAG content was determined using a Blyscan Glycosaminoglycan Assay (Biocolor, Carrickfergus, UK). Total collagen content was evaluated via a modified chloramine-T hydroxyproline assay [26 (link)]. A standard curve reflecting collagen amount was generated using a Sircol collagen standard (Biocolor). Both GAG and collagen contents were normalized to construct wet weight and dry weight.
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5

Biochemical Characterization of Facet Cartilage

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Facet cartilage sections were removed from the facet joints using a scalpel and weighed (wet weight). Tissues were frozen at À20 °C for $24 h, lyophilized for $48 h, and the dry weight was measured. Tissues were digested in 125 mg/ml papain (Sigma-Aldrich) in a phosphate buffer (2 mM N-acetyl cysteine (Sigma-Aldrich) and 2 mM EDTA) for 18 h at 60 °C. Following digestion, DNA and GAG content were measured using Picogreen Cell Proliferation Assay kit (Life Technologies) and Blyscan Glycosaminoglycan Assay kit (Biocolor), respectively. Total collagen was determined using a chloramine-T hydroxyproline assay and Sircol collagen standard (Biocolor), following hydrolysis with 2 N NaOH for 20 min at 110 °C.
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