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8 protocols using anti hla dr

1

Immunostaining of Paraffin-Embedded Tissue

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Paraffin‐embedded slices (5 µm) were used for immunohistochemistry and immunofluorescence. First, the sections were incubated with an anti‐FPR2 (1:500; Abcam) primary antibody overnight at room temperature. Second, these sections were incubated with secondary antibodies conjugated to a peroxidase‐labeled dextran polymer (Envision + System‐HRP; Boster) for 1 h at 37°C. Finally, these sections were stained with hematoxylin, dehydrated, and coverslipped. For double‐labeling immunofluorescence staining, sections were incubated at 4°C for 12 h with the following antibodies: anti‐FPR2 (1:500; Abcam), anti‐NF200 (1:500; Millipore), anti‐glial fibrillary acidic protein (GFAP) (1:500; Sigma), and anti‐HLA‐DR (1:500; Abcam). These sections were then incubated with the corresponding Cy3‐ and 488‐conjugated secondary antibodies (both at 1:500; Invitrogen) for 2 h at 37°C. Next, these sections were incubated with 4′,6‐diamidino‐2‐phenylindole (Beyotime) for 3 min at room temperature. Finally, the fluorescent sections were imaged with a Zeiss Axio Vert microscope (Zeiss).
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2

Immunohistochemical Analysis of Atrial Tissue

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The IHC staining was performed as described previously.[15 (link)] A series of 5 μm thick paraffin sections from human left atrial appendages were blocked with 2% BSA (bovine serum albumin) in PBS (phosphate-buffered saline) for 30 minutes and then stained with antibodies, anti-HLA-DR (Abcam, Cambridge,UK) and anti-CD 163 (Abcam) overnight at 4°C.[16 (link)] The slides were washed with PBS, incubated with biotinylated secondary antibody for 20 minutes, counterstained with hematoxylin, and mounted with glycerol gelatin. The staining was visualized using the VectaStain ABC-AP Kit (Alkaline Phosphatase, Standard, Burlingame) as per the protocols. PBS served as a negative control.
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3

Immunophenotyping of Macrophage Subsets

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Cells were incubated with anti-HLA-DR (M1, macrophage cell subpopulation marker, Abcam) or anti-CD206 (M2, macrophage cell subpopulation marker, Abcam) for 20 min at 4 °C according to the manufacturer's procedures. After washing twice with PBS, cells were resuspended in fluorescence-activated cell sorting (FACS) buffer. Then, fluorescence activated cell sorting was performed by using a FACSAria II instrument (BD Biosciences, Franklin Lake, NJ, USA), and the data were analyzed using FACSDiva 6.1.1 software (BD).
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4

Flow Cytometry Analysis of ASCs

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A flow cytometric assay of cell surface marker expression was conducted in 1 × 106 ASCs that had been stained with anti-CD90, anti-CD73, anti-CD105, anti-CD34, anti-CD11b, anti-CD19, anti-CD45, and anti-HLADR antibodies (1 mg/ml; Abcam, Cambridge, UK) and suspended in PBS. The samples were incubated for 30 minutes at room temperature, washed with PBS, and then analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, CA) and Kaluza software (Beckman Coulter).
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5

Immunohistochemical Analysis of Tissue Inflammation

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All tissue specimens were fixed overnight in 4% paraformaldehyde and embedded in paraffin. Paraffin-embedded tissues were cut into 4-μm-thick sections and deparaffinized before endogenous peroxidase quenching and epitope retrieval. After blocking with 1% bovine serum albumin (BSA) in PBS for 30 min, slides were incubated with anti-HLA-DR (Abcam) and anti-CD 163 (Abcam) overnight at 4°C. After washing three times with PBS, slides were incubated with biotinylated secondary antibody for 20 min. Staining was visualized using the VectaStain ABC-AP kit.
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6

Immunophenotyping of Induced Pluripotent Stem Cells

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Alkaline phosphatase (AP) activity was determined using an alkaline phosphatase detection kit (BCIP/NBT, Promega, USA). For immunocytochemical staining, iPSCs were fixed with 4% paraformaldehyde for 15 min at room temperature. And the cells were permeabilized with 0.1% Triton X-100 and then blocked with 1% bovine serum albumin (Amresco, Inc., USA). Staining was carried out using primary anti-Oct4 (1 : 100, Santa Cruz, USA), anti-Nanog (1 : 100, Santa Cruz, USA), anti-SSEA4 (1 : 100, Santa Cruz, USA), antibiotinylated CD45 (1 : 40; R&D Systems, USA), and anti-HLA DR (1 : 100; Abcam, UK), and samples were incubated overnight at 4°C. Appropriate Alexa Fluor® dye-conjugated secondary antibodies were as follows: donkey anti-mouse Alexa 555 (1 : 200; Invitrogen, USA), donkey anti-mouse Alexa 488 (1 : 200; Invitrogen, USA), and DAPI (1 : 5000, Invitrogen, USA) were used for nuclear counterstaining. Images were obtained using a confocal microscope (LSM 510 Meta; Carl Zeiss, Germany).
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7

Flow Cytometry Analysis of T Cell Activation

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The activation markers of T cells were analyzed after 72 hr co-culture of hAM-MSCs and T cells by flow cytometry. The content of wells was taken and centrifuged. The pellet was suspended in PBS and treated with phycoerythrin-conjugated (PE) anti-CD38, (United States Biological, Salem, Massachusetts USA) or anti-HLA-DR (Abcam, Cambridge, USA) for 45 min at 4 °C. The reaction for HLA-DR was carried out in two steps, in which F(ab′)2 anti-mouse IgG PE (eBioscience, San Diego, USA) was used in step 2 for 25 min. To ensure the specificity of the results, nonspecific antibody background binding was determined with the appropriately labeled isotypic control immunoglobulin IgG. The cells were finally analyzed by flow cytometry technique. The total number of samples in all the experiments was 3 (N=3).
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8

Mouse Model of Glaucoma Evaluation

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Thirty-five, 8- to 10 week-old female C57BL/6 mice (18 to 20 g, purchased from Hyochang Science, Daegu, Korea) were used for this study. These mice were kept in the facility with a standard environment throughout the study as follows: room temperature 25 ± 1℃, relative humidity 60 ± 10%, and alternating 12-hour light/dark cycles (8 a.m. to 8 p.m.). All experimental procedures were performed in accordance with the ARVO Statement for the Use of Animals in Ophthalmic and Vision Research. Based on the clinical evaluations (described below), the mice were then randomly divided into seven groups (5 mice for each group): normal saline-treated control group, BAC-treated group and five anti-glaucomatic agent-treated groups.
Anti-TNF-α, anti-IL-6 and anti-HLA DR were purchased from Abcam (Cambridge, MA, USA). Anti-phosphorylated c-Jun NH(2)-terminal kinase (pJNK) and anti-phosphorylated-Akt (pAkt) were purchased from Cell Signaling Technology (Allschwil, Switzerland). 4',6-diamidino-2-phenylindole (DAPI) and Prolong Gold were purchased from Invitrogen (Carlsbad, CA, USA).
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