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4 protocols using sc 28259

1

Immunofluorescence Analysis of PHB1 and FoxM1 Expression

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Panc-02 and Panc-02-PTX cells were fixed with 4% paraformaldehyde after treatment or transfection at the indicated time points. Then we permeabilized the cells with 0.1% Triton100. After that cells were immersed three times in Tris-buffered saline (TBS) and incubated with the PHB1 primary antibody (sc-28259, diluted 1:200; Santa Cruz Biotechnology, TX) overnight at 4°C and the corresponding Cy3 goat anti-rabbit secondary antibodies (3101, diluted 1:150; Earthox, Millbrae, CA, USA) for 1 h at room temperature (RT). DAPI (diluted 1:1,000; Sigma-Aldrich) was used to stain the nucleus. Tissue sections were performed on a microtome (HM 430, MICROM International, Walldorf, Germany). Sections were blocked with 5% BSA in PBS for 30 min and incubated with the primary mouse monoclonal antibody anti-FoxM1 (sc-271746, diluted 1:100; Santa Cruz Biotechnology) or polyclonal rabbit antibody against PHB1 (sc-28259, diluted 1:200; Santa Cruz Biotechnology), respectively, at 4°C overnight. The primary antibodies were detected with the secondary antibodies (sheep anti-mouse or goat anti-rabbit). After immunolabeling, the tissue samples were incubated with 1 μg/mL DAPI and covered in 0.1% 1, 4-diazabicyclo [2.2.2] octane (DABCO; Sigma-Aldrich). Microscopic images of cells were obtained using an Olympus IX71.
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2

Western Blot Analysis of Signaling Proteins

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Cultivated cells were harvested and lysed using lysis buffer [1% (v/v) Triton X-100, 200 mM HEPES (pH 7.9), 300 mM NaCl, 100 mM KCl, 10 mM EDTA, 10 µg/ml aprotinin, 100 µg/ml leupeptin, and 10 µM PMSF]. Twenty micrograms of total protein lysate was electrophoresed in an acrylamide gel and transferred to a TransBlot® membrane (162–0145, Bio-Rad, Hercules, CA, USA). Membranes were blocked in 5% (w/v) milk, incubated with primary antibodies for 1 h at room temperature, washed and incubated for 1 h with the appropriate HRP-conjugated secondary antibodies (sc-2004 and sc2005, Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA). The blots were washed in PBS containing 0.05% (v/v) Tween-20® (P1379, Sigma-Aldrich Korea) and an ECL kit (34080, Pierce Biotechnology, Rockford, IL, USA) was used prior to detection of protein bands. The antibodies used were: rabbit anti-prohibitin (sc-28259, Santa Cruz Biotechnology, Inc.), rabbit anti-β-catenin (sc-7199, Santa Cruz Biotechnology, Inc.), rabbit anti-GSK-3β (sc-9166, Santa Cruz Biotechnology, Inc.), rabbit anti-p-GSK-3β (sc-11757-R, Santa Cruz Biotechnology, Inc.), mouse anti-c-Myc (sc-40, Santa Cruz Biotechnology, Inc.), and mouse anti-β-actin monoclonal (sc-8432, Santa Cruz Biotechnology, Inc.) to determine equal loading.
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3

Protein Expression Analysis by Western Blot

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Twenty micrograms of cell extract was separated by sodium dodecyl sulphate–polyacrylamide gel electrophoresis and electroblotted onto nitrocellulose membranes. Nonspecific binding was blocked in tris-buffered saline with 0.05% Tween-20 and 5% (w/v) non-fat-dried milk. Primary antibodies were PHB mouse monoclonal (MS-261-PO; ThermoFisher) against GAPDH (SC-32233 (Santa Cruz, CA, USA); 1:5000) or PHB (SC-28259 (Santa Cruz Biotechnology, Inc., Dallas, TX, USA); 1:1000), MCM5 (SC-22780; Santa Cruz), E2F1 (SC-193; Santa Cruz). Peroxidase-labelled rabbit anti-mouse secondary antibodies (Sigma) were used at 1:2000. The membrane was then incubated in chemiluminescent substrate (GE Healthcare), and light emission detected by autoradiography.
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4

Antibody-mediated phagocytosis in ARPE-19 cells

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The following antibodies were used in this study: ZO-1 (1:100; sc-10804, Santa Cruz Biotechnology, Santa Cruz, CA, USA), prohibitin (1:100; sc-28259, Santa Cruz), transcriptional factor EB (TFEB) (1:100; sc-11004, Santa Cruz), CD36 (2 μg/ml; ab23680, Abcam, Cambridge, MA, US), MerTK (3.44 μg/ml; ab52968, Abcam), PGC-1α antibody (1μg/ml; ST1202, Calbiochem, La Jolla, CA, USA), and β-actin (1:2000; A5316, Sigma-Aldrich, St. Louis, MO, USA). ARPE-19 cells were pretreated with anti-CD36 and anti-MerTK antibodies for 1 h before a 3-h POS treatment. Latex beads (0.6 μm, 10 beads/cell, LB6) and Arg–Gly–Asp (RGD) peptide (0.5 mM; A8052) were from Sigma–Aldrich. Further, ARPE-19 cells were pretreated with RGD peptide for 30 min before a 3-h POS treatment. The cells were also pretreated with focal adhesion kinase (FAK) inhibitor 14 (500 μM) (sc-203950, Santa Cruz) for 30 min. Cathepsin D activity assay kit (ab65302) was purchased from Abcam.
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