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Gcms qp

Manufactured by Shimadzu
Sourced in Japan

The GCMS-QP is a gas chromatography-mass spectrometry (GC-MS) system manufactured by Shimadzu. It is designed for the identification and quantification of a wide range of chemical compounds. The GCMS-QP combines a gas chromatograph and a mass spectrometer to provide comprehensive analytical capabilities.

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4 protocols using gcms qp

1

Anammox-CdS Biohybrid System Tracer Study

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The 15N stable isotope tracer experiment was used to explore the pathway of NH4+-N conversion in the anammox-CdS biohybrid system. After anammox biomass was combined with the CdS nanoparticles, the supernatant was poured out, and the labeled 15NH4Cl of 25 mg-N/L (Cambridge Isotope Laboratories, Trading Company, USA), 0.1 g cystine were added to the vial along with 100 mL medium incubated for 9 h (sparged with helium to ensure anaerobic conditions in the vial), and with gas sample analysis every 3 h. The concentration of 28N2, 29N2, 30N2, 14NO, 15NO, 28N2O, 29N2O and 30N2O were measured by a gas chromatography-mass spectrometer (GCMS-QP, SHIMADZU, Japan).
To exploit the real intermediate product during photocatalytic NH4+-N oxidation process, the anammox-CdS biohybrid system was incubated with 15NH4Cl of 25 mg-N/L (Cambridge Isotope Laboratories, Trading Company, USA) and 14NH2OH of 12.5 mg-N/L for 9 h, and extracted the headspace gas every 3 h to detect the content of 30N2, 29N2 and 28N2 produced by the gas chromatography-mass spectrometer (GCMS-QP, SHIMADZU, Japan).
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2

Profiling Microbial Antibiotic Compounds

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The crude extracts were analyzed with GC-MS/MS (fused silica 15 m × 0.2 mm ID × 1 μm of capillary column, Shimadzu GC-MS QP, Kyoto, Japan) and the sample injection volume was 1 μL. The settings were: initial temperature 30 °C for 2 min, gradual rise to 280 °C and maintenance for 9 min, ionization voltage 70 eV, and mass spectral scan range 25–250 m/z. The GC-MS/MS data were interpreted with the NIST database performed with MMF (minimum match factor, NIST, Gaithersburg, MD, USA) 75 for all the components and also using the virtue of comparisons having more than 62,000 patterns.
MRM/MS analysis was used to detect the antibiotic compound phenazine-1-carboxylic acid (C12H8N) in the extracts. Agilent 6420 Triple Quad LC/MS system with C18-AR column, 3 µm, 50 × 4.6 mm (MAC-MOD Analytical Inc. Part No. EXL1190546U, MAC-MOD Analytical, Chadds Ford, PA, USA) was used with the mobile phase as acetonitrile-water-trifluoroacetic acid (90:10:0.04, v/v/v) at flow rate 1.0 mL/min and wavelength 248 nm and the sample injection volume was 1 μL.
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3

GC-MS Quantification of DDT

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The DDT was quantified by gas chromatography-mass spectrometry (GC-MS), as described by Baumer et al. (2020) (link). The system consisted of GC-MS (QP) by Shimadzu (Kyoto, Japan), coupled with a mass detector and a capillary column. Detailed specifications were 30 m DB-5, 0.1 μm film thickness, and 0.25 mm internal diameter of the capillary column used for the determination of DDT. Samples were injected using a splitless injection mode while keeping an ion source temperature of 250°C and using helium as the carrier gas at 0.75 ml/min flow rate. The oven temperature was ramped at the rate of 4°C min–1, initializing its range from 120°C to 190°C, and at the rate of 32°C min–1 up to 270°C, which was kept constant for 4 min. By operating the mass spectrometer at scanning mode between 45 and 475 Da (m/z), DDT was detected in the sample size of 50 μl with a minimum limit of 1 mg kg–1.
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4

Characterization of Savory and Thyme Essential Oils

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Essential oils from savory (Satureja montana L.) and thyme (Thymus vulgaris L.) were purchased as commercial preparations with 99% purity from Soave (Turin, Italy). The compositional analyses were performed using a gas chromatograph Shimadzu (Kyoto, Japan) GC-2010 Plus equipped with a mass spectrometer GCMS-QP (Shimadzu, Kyoto, Japan) and a split-splitless injector (Shimadzu, Kyoto, Japan) [17 (link)]. A 10% stock emulsion (10% essential oil, 88% sterilized water, and 2% Tween 20, Merck, Darmstadt, Germany) was prepared from each essential oil. Emulsions of 1%, 0.5%, and 0.1% (vol/vol) were prepared for each essential oil application by diluting the stock emulsion with distilled water. All the resultant emulsions were shaken for 30 s before application to ensure a homogeneous essential oil mixture.
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