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4 protocols using anti cdx2 antibody

1

Antibody Sourcing and Characterization

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All chemicals and drugs were purchased from Sigma (St. Louis, MO, USA) unless otherwise indicated. The anti-H2A.X antibody, anti-LC3 antibody, anti-rabbit IgG (H + L), F (ab’)2 Fragment (Alexa Fluor® 594 Conjugate) antibody, anti-pERM antibody, anti-pMRLC antibody were purchased from Cell Signaling Technology (Danvers, MA, USA). The anti-CDX2 antibody was purchased from BioGenex (San Francisco, USA). The anti-Nanog antibody was purchased from Abcam (Cambridge, United Kingdom). The anti-alpha Tubulin antibody was purchased from Thermo Fisher (Shanghai, China). The Fluorescein (FITC)–conjugated Affinipure Goat Anti-Rabbit IgG (H + L) secondary antibody was purchased from Proteintech (Beijing, China).
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2

Immunostaining of Embryonic Markers

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Embryos were fixed with 4% paraformaldehyde in PBS–0.1% PVA at 4°C overnight. After permeabilization with 0.5% Triton X-100 in PBS–0.1% PVA (PBST–PVA) for 1 h at room temperature, embryos were blocked with 1% BSA in PBST–PVA at 4°C for 6 h. Embryos were incubated with primary anti-NANOG antibody (1:500; Abcam, Cambridge, MA, USA), and anti CDX2 antibody (1:200; BioGenex, Fremont, CA, USA) at 4°C overnight, followed by Alexa Fluor-488 (anti-mouse; Invitrogen) and Alexa Fluor-594 (anti-rabbit; Invitrogen)-labeled secondary antibodies for 1 h at room temperature. Finally, the embryos were counterstained with DAPI.
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3

Embryonic CDX2 Expression Imaging

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Embryos were fixed overnight at 4°C in immunostaining fixing solution (Beyotime, P0098). Unless otherwise stated, all staining steps were performed at room tem-perature. Embryos were permeabilized with immunostaining solution containing Triton X-100 (Beyotime, P0096) for 0.5 h. After washing 5 times, they were blocked at 4°C for 12 h in the immunostaining blocking solution (Beyotime, P0260) and then incubated with primary antibody at 4°C for 12 h. Anti-CDX2 antibody (BioGenex) was diluted 1:50 using QuickBlock dilution buffer for immunostaining (Beyotime, P0262). After washing 5 times, embryos were incubated with secondary antibody Alexa Fluor 555-labeled goat antimouse IgG (Beyotime, A0459) for 2 h, washed, and then sealed with 4,6-diamidino-2-phenylindole (DAPI; Beyotime, C1005), 10 min, sealing tablets (Su et al., 2012) (link). Finally, the embryos were photographed with a LSM 700 fluorescence microscope (Carl Zeiss). All experiments were replicated at least 3 times with a group of 10 to 15 embryos in each replicate. For fluorescence quantification, the intensity levels of the NT group and ZFP57 overexpression/knockdown embryos were expressed relative to the average intensity level of IVF embryos. Intensities were measured as described previously (Zhang et al., 2022b) .
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4

siRNA Knockdown of CDX2 in NTERA-2 Cells

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Three different small interfering RNA (siRNA) duplexes were designed targeting the human CDX2 mRNA (Stealth siRNA; Life Technologies). siRNA and CDX2 transfection were performed in induced NTERA-2(RA14) with 100nM RNAi duplexes using Lipofectamine 2000 (Invitrogen)
according to the manufacturer instructions. CDX2 depletion and overexpression were verified by immunoblotting 48 h after siRNA transfection. Whole cell extracts were prepared through repeated freeze and thaw cycles and extraction in 10mM Hepes PH7.9, 100mM NaCl, 0,1mM EGTA, 5%
glycerol and proteases and phosphatases inhibitors. Immunoblotting analyses were performed with anti-CDX2 antibody (Biogenex, cat#MU392A-UC clone Cdx2-88) and anti-α-Tubulin (Sigma, T6074, clone B-5-1-2). Protein expression in immunoblots was quantified using the ImageJ software.
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