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7 protocols using quemesa ccd camera

1

Ultrastructural Analysis of HSV-1 Infection

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Vero cells infected with wild type HSV-1 strain 17+ (MOI 5) and non-infected control cells were fixed in 3.9% paraformaldehyde and 0.25% glutaraldehyde in 50 mM phosphate buffer (at a pH of 6.8) followed by post-fixation in 1% OsO4 for 1 h on ice. Cells were dehydrated with ethanol and then embedded in low viscosity embedding resin (TAAB Laboratories Equipment Ltd, UK). Thin sections were cut with an Ultracut UC6a ultramicrotome (Leica Mikrosysteme GmbH, Germany) and collected on Pioloform-coated, single-slot copper grids. Sections near the middle plane of the nucleus were selected, and they were stained with 2% aqueous uranyl acetate and lead citrate and examined with a JEOL JEM-1400 electron microscope (JEOL Ltd., Tokyo, Japan) operated at 80 kV. The images were captured using a bottom mounted Quemesa CCD camera with a resolution of 4008 × 2664 pixels (EMSIS GmbH, Münster Germany).
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2

Ultrastructural Analysis of Hepatocyte Mitochondria

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Freshly isolated tissue samples were punched with 1 mm³ for 3–5 times and immediately fixed by immersion with 2% (w/v) paraformaldehyde and 2.5% (v/v) glutaraldehyde in 0.1 M phosphate buffer at RT for 2 h and at 4°C overnight. Samples were transferred to 1% paraformaldehyde in 0.1 M phosphate buffer at 4°C for long-term storage and then postfixed and stained consecutively with 1% (w/v) tannic acid, 1% (v/v) osmium tetroxide, and 2% (w/v) uranylacetate at RT, dehydrated in a graded series of ethanol, and embedded in PolyBed® 812 resin (Polysciences). Ultrathin sections (60–80 nm) were made and stained with uranyl acetate and lead citrate, and examined at 80 kV with a Zeiss EM 910 electron microscope (Zeiss). Acquisition was done with a Quemesa CCD camera using iTEM software (Emsis GmbH) at 5000× magnification with a field of view of 11.2 × 7.4 μm per image. 9 independent images per mouse at different positions within the liver sections representing hepatocytes were used for evaluation and quantification of mitochondria.
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3

Ultrastructural Analysis of MNT-1 Cells

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MNT-1 cells cultured on carbonated sapphire disks or CryoCapsules (CryoCapCell; Heiligenstein et al., 2014 (link)) were transfected with control, Myo6, or WASH siRNAs or treated for 60 min with 25 µM DMSO or TIP. Cell were high-pressure frozen with HPM100 (Leica Microsystems) or HPM Live μ (CryoCapCell) and then freeze substituted in anhydrous acetone containing 1% OsO4/2% H2O for 64 h in a freeze substitution system (AFS; Leica Microsystems). Cells were embedded in epon 812 (TAAB Laboratories Equipment) and processed for sectioning and contrasting with uranyl acetate and lead citrate. Ultrathin sections were observed at 80 kV transmission electron microscope (Tecnai Spirit G2; Thermo Fisher Scientific) equipped with a QUEMESA CCD camera (EMSIS) using iTEM software (EMSIS). For ultrathin cryosections and immunogold labeling, MNT-1 cells were grown on six-well plates and fixed with 2% PFA/0.2% glutaraldehyde/0.1 M phosphate buffer. Cells pellets were embedded in 10% gelatin and infused in 2.3 M sucrose. Gelatin blocks were frozen and processed for ultracryomicrotomy. Ultrathin sections (90 nm) were double-immunogold labeled using PAG 10 or 15 nm and analyzed by EM as described above.
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4

Ultrastructural Imaging of Infected Cells

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Infected cells and non-infected control cells were fixed in 4% paraformaldehyde and 0.25% glutaraldehyde in 50 mM phosphate buffer (at a pH of 6.8) followed by post-fixation in 1% OsO4 for 1 h on ice. Cells were dehydrated with ethanol and then embedded in low-viscosity embedding resin (TAAB Laboratories Equipment Ltd, UK). Thin sections were cut by Ultracut UC6a ultramicrotome (Leica Mikrosysteme GmbH, Germany) followed by collection on Pioloform-coated, single-slot copper grids. Sections were double stained with 2% aqueous uranyl acetate and lead citrate and examined using TEM JEOL JEM1400 (JEOL Ltd., Tokyo, Japan), operated at 80 kV. The images were recorded using a bottom-mounted Quemesa CCD camera with 4008 × 2664 pixel resolution (EMSIS GmbH, Münster Germany).
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5

TEM Characterization of Al2O3 Nanopowder

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The morphology of the Al2O3 nanopowder was examined with transmission electron microscopy (TEM) imaging using a Hitachi H-800 electron microscope (Hitachi, Tokyo, Japan). The powder was suspended in deionized water and macroscopic aggregates were ultrasonically partitioned for 1 s. The solution was immediately put on the standard carbon-on-copper supporting grids with a volume of 4 µL, drained of most liquid with filtering paper, then air dried for 1 h. Observations were made in standard bright-field mode, using an accelerating voltage of 150 kV and an EMSIS Quemesa CCD camera (EMSIS GmbH, Muenster, Germany).
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6

Tubuloid Ultrastructural Analysis

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Tubuloids were released from Matrigel by mechanical disruption, collected in a conical tube and fixed in 2% (w/v) formaldehyde and 2.5% (v/v) glutaraldehyde in 0.1 M phosphate buffer for 2 hrs. After embedding in 10% agarose in a 2-ml tube, samples were post-fixed with 1% (v/v) osmium tetroxide (Sigma-Aldrich), dehydrated in a graded series of EtOH and embedded in PolyBed® 812 resin (Polysciences). Ultrathin sections (60–80 nm) were stained with uranyl acetate (Polysciences) and lead citrate (Sigma-Aldrich) and examined at 80 kV with an EM 910 electron microscope (Zeiss). Acquisition was performed with a Quemesa CCD camera and the iTEM software (Emsis).
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7

Electron Microscopy Protocol for Organoids

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Organoids were fixed in 2% (w/v) formaldehyde and 2.5% (v/v) glutaraldehyde in 0.1 M phosphate. After embedding in 10% agarose, samples were post-fixed with 1% (v/v) osmium tetroxide, dehydrated in a graded series of EtOH, and embedded in PolyBed® 812 resin. Ultrathin sections (60–80 nm) were stained with uranyl acetate as well as lead citrate and examined at 80 kV with a Zeiss EM 910 electron microscope. Acquisition was done with a Quemesa CCD camera and the iTEM software (Emsis GmbH).
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