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4 protocols using 1 ethyl 3 3 dimethylaminopropyl carbodiimide hydrochloride edc hcl

1

Immobilized Lipase-Catalyzed Esterification

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CAL-B (Novozyme 435), which is a lipase derived from Candida Antarctica type B and immobilized on acrylic resin, was purchased from Sigma Aldrich, St. Louis, MO, USA. Prior to its use, it was first vacuum-dried over Phosphorous pentoxide for 24 h. Sorbitol (98%) and divinyl adipate (96%) were purchased from Sigma Aldrich (Steinheim, Germany) and TCI GmbH (Eschborn, Germany), respectively. Phosphorous pentoxide (≥99%), 4-(dimethylamino)pyridine (DMAP), anhydrous N,N-dimethylformamide (DMF, 99.8%), anhydrous tetrahydrofuran (THF, 99.9%), acetonitrile (anhydrous, 99.8%), 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride (EDC·HCl), dialysis membranes with 1000 g·mol−1 molecular weight cut off (MWCO), and 10,000 g·mol−1 MWCO (Spectra/Por®, made from regenerated cellulose) were purchased from Carl Roth, Karlsruhe, Germany. α,ω-bis-hydroxy poly(ethylene glycol)n (where n = 9, 23, and 45) and α- methoxy,ω-hydroxy poly(ethylene glycol)n (where n = 12) (mPEG 550) were purchased from Alfa Aesar, Kandel, Germany. DY-781 Amine (molecular weight: 781 g·mol−1) and DY-784 NHS-ester (molecular weight: 1188 g·mol−1) were purchased from Dyomics GmbH (Jena, Germany), while BSA-TMR was purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA).
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2

Enzymatic Synthesis of PEG-Based Esters

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Novozyme 435, Lipase derived from Candida Antarctica type B (CAL-B) and immobilized on acrylic resin, was purchased from Sigma Aldrich, St. Louis, MO, USA. It was vacuum dried over Phosphorous pentoxide for 24 h prior to use. Sorbitol (98%) and divinyl adipate were purchased from Sigma Aldrich (Steinheim, Germany) and TCI GmbH (Eschborn, Germany), respectively. Phosphorous pentoxide (≥99%), 4-(dimethylamino)pyridine (DMAP), anhydrous N,N-dimethylformamide (DMF, 99.8%), anhydrous tetrahydrofuran (THF, 99.9%), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide hydrochloride (EDC·HCl), dialysis membranes with 1000 g·mol−1 molar mass cut off (MWCO) and 10,000 g·mol−1 MWCO (Spectra/Por®, made from regenerated cellulose) were purchased from Carl Roth, Karlsruhe, Germany. Deuterated chloroform (CDCl3) and deuterated dimethyl sulfoxide (DMSO-d6) were purchased from Armar (Europa) GmbH (Leipzig, Germany). α,ω-bis-hydroxy poly(ethylene glycol)n (OH-PEGn-OH, with n = 9, 23, and 45) and α-methoxy,ω-hydroxy poly(ethylene glycol)12 (mPEG12-OH) were purchased from Alfa Aesar (Kandel, Germany).
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3

Preparation and Characterization of BoNT-A Solution

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Inorganic salts, sucrose, Tween 80, human serum albumin, and gamma globulin (IgGHum) (AppliChem GmbH, Darmstadt, Germany and Sigma–Aldrich, St. Louis, MO, USA) were used in this work. A commercial set of bovine blood serum samples was used (Biolot, Saint Petersburg, Russia).
All experiments were performed in ultrapure water prepared with Milli-Q equipment (Merck KGaA, Darmstadt, Germany). PBS was prepared from tablets from EcoService (Saint Petersburg, Russia). HEPES buffer, pH 7.5, from AppliChem (Darmstadt, Germany), 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride (EDC-HCl) from Roth (Karlsruhe, Germany), and sodium salt of N-hydroxysulfosuccinimide (s-NHS) from Chem-Impex Int’l (Wood Dale, IL, USA) were used.
Xeomin 50 Units per vial (Merz therapeutics, Frankfurt am Main, Germany) contains BoNT serotype A in human serum albumin with sucrose. The powder was dissolved in 125 µL Ringer’s solution (Grotex, Saint Petersburg, Russia) providing a solution with 400 Units/mL BoNT, 8 mg/mL human serum albumin, and 38 mg/mL sucrose. The solution was exploited immediately after the preparation. According to Frevert [21 (link)], 400 Units/mL of Xeomin corresponds to 1.76 ng/mL or 11.7 pM of BoNT serotype A.
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4

Biomolecular Coupling Protocol

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Inorganic salts and tris(hydroxymethyl)aminomethane (tris) were purchased from MP Biomedicals (Illkirch, France) and Sigma-Aldrich (St. Louis, MO, USA). Human thrombin with a specific activity of 4.2 kIU/mg and human factor Xa were purchased from Haematologic Technologies (Essex Junction, VT, USA). Ethanolamine from Sigma-Aldrich (St. Louis, MO, USA), 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride (EDC-HCl) from Roth (Karlsruhe, Germany), and sodium salt of N-hydroxysulfosuccinimide (s-NHS) from Chem-Impex Int'l (Wood Dale, IL, USA) were used. DNA oligonucleotides were synthesized and purified by polyacrylamide gel electrophoresis by Synthol (Moscow, Russia). Ultra-pure water (18.2 MΩ•cm) was obtained with Milli-Q (Merck KGaA, Darmstadt, Germany) and used to prepare all buffers and solutions.
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