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6 protocols using ab16829

1

Antibody Panel for Extracellular Vesicle Analysis

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The antibody to ALPL (11187-1-AP) was purchased from Proteintech (Wuhan, China). Antibody to CD81 (GTX31381) was purchased from GeneTex (Texas, USA). Antibodies to CD9 (ab92726), TSG101 (ab125011), PDGFBB (ab16829) and P2X7 (ab48871) were purchased from Abcam (Cambridge, USA). Antibodies to VEGF (SC-57496) and Endostatin (SC-32720) were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibody to Angiostatin (AF-226) was purchased from R&D (R&D sysstems, USA). Anti β-Tubulin antibody was purchased from Cwbiobiotech (Beijing, China).
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2

Western Blot Analysis of Spinal Cord Proteins

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Total protein was extracted from the L4-L6 spinal cord segments as previously described66 (link). Proteins were separated by SDS-PAGE and transferred to PVDF membranes. The membranes were incubated overnight at 4 °C with the following primary antibodies: rabbit anti-GFAP (1:500) (ab53554, Abcam), rabbit anti-Substance P (1:500) (orb215527, Biorbyt), rabbit anti-CGRP (1:500) (ab47027, Abcam), rabbit anti-PDGF BB (1:300) (ab16829, Abcam), rabbit anti-pPDGFRα (1:1000) (#2992, Cell Signal), rabbit anti-pPDGFRβ (1:1000) (#2227,Cell signal), rabbit anti-ERK(1:500) (ab184699, Abcam), rabbit anti-pERK (1:1000) (#4370, Cell Signal), rabbit anti-AKT (1:500) (9272s, Cell Signal) and rabbit anti-pAKT (1:1000) (4056s, Cell Signal). The membranes were subsequently incubated with the appropriate secondary antibodies (1:5000; Abcam) for 1 h at room temperature. The protein bands were detected using an enhanced chemiluminescence detection system. Then, the membranes were stripped with stripping buffer (P0025, beyotime) and reblotted with antibodies against the loading controls [mouse anti-β-actin (1:5000) (ab119716, Abcam) and mouse anti-GAPDH (1:5000) (ab9484)]. The intensity of the immunoreactive bands was quantified using Image J software. The ratio of target protein to β-actin (loading control) levels was statistically analyzed. Western blot experiments were repeated 3 times.
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3

Western Blotting of Extracellular Vesicles and Tissue Proteins

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sEVs extracted above were added to 5×SDS gel loading buffer [30 mM Tris-HCl (pH 6.8), 2% SDS, 0.05% bromphenol blue, 12.5% glycerol, and 2.5% mercaptoethanol] and then boiled for 30 min. Then 20 μg of sEVs were added into each lane on 10% SDS polyacrylamide gels and the mixtures were resolved for Western blotting analysis. The samples were blotted onto PVDF membranes (Millipore, Boston, MA, USA), which were blocked with 5% milk for 1 hour at room temperature and then probed with relevant primary antibodies of CD63 (ab193349, Abcam, Cambridge, MA, USA), GM130 (ab52649, Abcam, Cambridge, MA, USA), and Alix (sc53540, Santa Cruz Biotechnology, Shanghai, China) at 4°C overnight. Subsequently, membranes were reacted with horseradish peroxidase-conjugated secondary antibodies for 1 h at room temperature and observed using the ECL kit chemiluminescence reagents (Millipore, Billerica, MA, USA). Similarly, tissue proteins were isolated from hearts with RIPA lysis buffer and 20 μg of proteins per sample were analyzed using primary antibodies against hepatocyte growth factor (HGF, ab83760, Abcam, Cambridge, MA, USA), vascular endothelial growth factor (VEGF, ab64154, Abcam, Cambridge, MA, USA), and platelet derived growth factor BB (PDGF-BB, ab16829, Abcam, Cambridge, MA, USA). Other procedures were the same as described above.
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4

Immunostaining of Vascular Markers

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Sections were obtained as mentioned above, and the slides were incubated overnight. The slides were washed for 15 min in 0.1% Triton X-100 diluted with PBS and blocked with 5% bovine serum albumin (ZSGB-BIO, Beijing, China) for 30 min. The slides were incubated in the following antibodies overnight at 4°C: CD31 anti-collagen I (1:2000, ab182981, Abcam, Cambridge, United Kingdom), endomucin anti-collagen I (1:50, sc-65495, Santa Cruz Biotechnology, Santa Cruz, CA, USA), PDGF-BB anti-collagen I (1:100, ab16829, Abcam, Cambridge, United Kingdom), VEGFA anti-collagen I (1:100, ab46154, Abcam, Cambridge, United Kingdom), HMGB1 anti-collagen I (1:100, ab79823, Abcam, Cambridge, United Kingdom). The slides were washed with PBS AND incubated with a fluorescent secondary antibody (AlexaFluor®488) for 50 min at 37°C. DAB was used to stain the nuclei. The slides were observed under a fluorescence microscope (Motic, Wetzlar, Germany). ImageJ software (National Institutes of Health, Bethesda, MD, USA) was used to images the results at 200× magnification.
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5

Spinal Cord Tissue Immunohistochemistry Protocol

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PFA-fixed L4 spinal cord segments were embedded in O.C.T. compound (Tissue-Tek, Sakura, USA), and 10-μm serial transverse sections were sliced using in a cryostat. The sections were blocked with 5% normal goat serum for 2 h and incubated overnight at 4 °C in a humidified chamber with the following primary antibodies: rabbit polyclonal anti-PDGF BB (1:100) (ab16829, Abcam), mouse monoclonal anti-NeuN (1:400) (ab104224, Abcam), mouse monoclonal anti-GFAP (1:50) (MAB3402x, Millipore), mouse monoclonal anti-OX-42 (1:100) (MCA275G, AbDsreotec), rabbit polyclonal anti-RFP (1:400) (r10367, Abcam), rabbit polyclonal anti-SP (1:100) (AB1566, Chemicon) and rabbit polyclonal anti-CGRP (1:200) (ab22560, Abcam). The primary antibodies were dissolved in 2% normal goat serum. The sections were washed 3 times with PBS for 5 min each and incubated with the appropriate secondary antibodies: goat anti-rabbit (1:400) (A-24921, Invitrogen) and goat anti-mouse (1:400) (A-24920, Invitrogen) for 2 h at 37 °C. The sections were washed with PBS 3 times for 5 min each, stained with DAPI and mounted. To confirm the specificity of the PDGF labeling, the synthetic immunogen (HangZhou HuaAn Biotechnology Co. Ltd) was pre-incubated with the PDGF-BB antibody. Then, sections in this experimental control were performed by the same process as described above (see Supplementary Fig. S1).
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6

Membrane Protein Extraction and Analysis

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The induced membrane proteins were collected by lysis in RIPA buffer, a BCA protein assay was used to measure the protein content. After centrifugation for 10 min, the extracted protein was put in boiling water for 10 min. The proteins were isolated by 10% polyacrylamide gel electrophoresis at 120 mV, and transferred to PVDF membranes at 200 mA for approximately 1h. Subsequently, the membranes were blocked using 5% non-fat dried milk and 4% BSA for 2 h at 25°C, followed by incubation with the following primary antibodies: anti-GAPDH (1:1000, Shanghai Kangcheng Co., China), anti- HMGB1 (1:1000, ab79823, Abcam, Cambridge, United Kingdom), anti-VEGFA (1:1000, ab46154, Abcam, Cambridge, United Kingdom), anti-CD31 (1:1000, ab182981, Abcam, Cambridge, United Kingdom), and anti-PDGF-BB (1:1000, ab16829, Abcam, Cambridge, United Kingdom), anti-Endomucin (1:1000, sc-65495, Santa Cruz Biotechnology, Santa Cruz, CA, USA). Subsequently, the membranes were incubated with the appropriate horseradish peroxidase (HRP)-conjugated secondary antibody (1:10,000, ZB-2301, Wuhan Bode Biological Engineering Co, Ltd, Wuhan, China) for 1h on a shaker at 37°C. Finally, after ECL chemiluminescence, development, and fixation, the film was scanned. Sensiansys software in a JS-680A automatic gel imaging analysis system was used for the grayscale analysis of the target bands.
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