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0.45 μm filter

Manufactured by Thermo Fisher Scientific
Sourced in United States

The 0.45 μm filter is a laboratory filtration device designed to remove particles and contaminants from liquids. It features a 0.45 micron pore size membrane that can effectively trap a wide range of particulates and microorganisms. This filter is commonly used in various applications that require clarification or sterilization of solutions.

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24 protocols using 0.45 μm filter

1

Lentiviral Particle Production and Cell Transduction

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The lentiviral particles were prepared by PEI co-transfection of HEK293T cells with the corresponding lentiviral plasmids and the packaging plasmids. The supernatants were harvested 48 h after transfection and centrifuged for 30 min at 3000 g at 4°C to remove cells and then passed through a 0.45-μm filter (Thermo Scientific) to remove cellular debris. The supernatant was further centrifuged for 2.5 h at 30,000 g at 4°C (Avanti J-26S XPI High-performance Centrifuge, Beckman Coulter). The concentrated lentiviral stocks were frozen at −80°C for future use. HEK-293T and Raji cells were infected with lentivirus and sorted by FACS.
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2

Overexpression of GOLPH3 in Cancer Cells

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MDA-MB-231, NRK, and HeLa S3 cell lines were grown according to American Type Culture Collection (Manassas, VA) guidelines. The stable MDA-MB-231 cell lines that overexpress GOLPH3-IRES-GFP, GOLPH3-R90L-IRES-GFP, or IRES-GFP were constructed with the pBABE-Puro retroviral system (Morgenstern and Land, 1990 (link)). Empty retroviral expression vector pBABE-Puro and packaging vectors pUMVC and pVSV-G were kind gifts from Jing Yang (University of California, San Diego). The expression vector of wild-type GOLPH3 was generated by serial cloning to combine GOLPH3 (Dippold et al., 2009 (link)) and IRES-hrGFP (Stratagene/Agilent, Santa Clara, CA) into the BamHI and EcoRI sites of pBABE-Puro vector. Expression and packaging vectors were transfected into HEK293T packaging cells using TransIT-LT1 (Mirus, Madison, WI). Viral supernatants harvested at 48 and 72 h after transfection were filtered through a 0.45 μm filter (Thermo Fisher Scientific, Waltham, MA) and incubated with target MDA-MB-231 cells in the presence of 6 μg/ml protamine (Sigma, St. Louis, MO). 24 h after the second viral infection, 0.5 μg/ml puromycin (InvivoGen, San Diego, CA) was used to select and maintain stable cell pools. The cell lines overexpressing IRES-GFP and R90L-IRES-GFP were generated in similar manner.
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3

Isolation and purification of HIV-1 virions

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The cell culture media containing HIV-1 particles were centrifuged at 1,200 × g for 5 min. The supernatants were passed through a 0.45-μm filter (ThermoFisher) and layered onto 20% sucrose for a 2-h ultracentrifugation at 25,000 × g at 4 °C. The virion pellets were subsequently isolated using anti-CD44 microbeads with a magnetic-based method according to the manufacturers’ instructions (µMACS™ VitalVirus HIV Isolation Kit, Miltenyi Biotec). The purified virions were lysed with RIPA buffer (ThermoFisher) and subjected to SDS-PAGE for western blotting as previously described (20 (link)).
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4

Generating Pseudotyped Lentiviral and Retroviral Vectors

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Vesicular stomatitis virus (VSV)-G protein pseudotyped lentiviruses and retroviruses were prepared by using polyethylenimine (PEI; Sigma) to co-transfect 293T cells with a lentiviral or retroviral plasmid and pantropic VSVg (Addgene) and either psPAX2 (Addgene) (lentivirus) or pCL-Eco (retrovirus) packaging plasmids. After culture in HMEC-1 medium for 48 hrs at 37°C, the viral supernatant was harvested, filtered through a 0.45 μm filter (Thermo Fisher Scientific), and used immediately. Cells stably expressing pHAGE-xCT-HA-FLAG were selected in medium containing 1 μg/mL puromycin dihydrochloride (Corning), and cells expressing pMXS-SLC1A3 were selected in 5 μg/mL blasticidin (Invivogen).
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5

Isolation of HIV-1 Virions

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The cell culture media containing HIV-1 particles were centrifuged at 1,200 × g for 5 min. The supernatants were passed through a 0.45-μm filter (Thermo Fisher) and layered on 20% sucrose for a 2-h ultracentrifugation at 25,000 × g at 4 °C. The virion pellets were subsequently isolated using anti-CD44 microbeads with a magnetic-based method according to the manufacturers’ instructions (µMACS VitalVirus HIV Isolation Kit; Miltenyi Biotec). The purified virions were lysed with RIPA buffer (Thermo Fisher) and subjected to SDS-PAGE for Western blotting.
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6

Scalable Transient Protein Expression in Expi293

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Proteins were expressed using the Expi293™ expression system (Thermo Fisher Scientific, Waltham, MA, USA), which is a high-yield transient expression system based on suspension-adapted human embryonic kidney (HEK) cells. In brief, for the scalable transfection of the Expi293F™ cell lines in the Expi293™ expression medium (Gibco, Grand Island, NY, USA), 30 μg of plasmid was transfected into 30mL Expi293F cells at a cell density of approximately 4.5–5.5 × 106 viable cells/mL. The cells were incubated at 37 °C with a humidified atmosphere of 8% CO2 on an orbital shaker. After 3 days, the cell supernatant was collected. The supernatant was centrifuged at 3000g for 10 min and filtered through a 0.45 μm filter (Thermo Fisher Scientific). All purified proteins were concentrated using a 30kDa ultrafiltration tube (Millipore, Bedford, MA, USA), and the buffer was replaced with PBS. The concentration of the protein was measured using a BCA kit (Pierce™ BCA Protein Assay kit, Thermo Fisher Scientific). Proteins were characterized using reduced and non-reduced SDS-PAGE [43 (link)].
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7

Extracellular Vesicle Isolation from Mouse Brains

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EV isolations from the brains were carried out as described previously with modifications according to the protocol [22 (link)]. The fresh and previously frozen mice hemibrains were harvested and dissected finely. The brain samples were then treated with 20 units/ml papain (Worthington) in Hibernate E solution (BrainBits, Springfield, IL) for 15 min at 37 °C. The same volume of cold Hibernate E solution was added to the brain samples to stop the reaction of papain. The brain tissue was then gently homogenized and filtered through a 40-μm mesh filter (BD Biosciences), followed by a centrifugation at 300×g for 10 min and 3000×g for 20 min at 4 °C to get rid of cells, membranes, and debris. After the supernatants were filtered through 0.45-μm filter (Thermo Scientific), they were subjected to 10, 000×g for 30 min at 4 °C to eliminate organelle contaminations. The supernatants were further centrifuged at 100,000×g for 70 min at 4 °C to pellet EVs. The pellets were then resuspended in filtered PBS, or MPER lysate solution for NanoSight or Western blot. All the samples were ultracentrifuged in ultraclear polycarbonate tubes (Beckman Coulter) that have a volume of 13.2 ml. A Beckman Coulter ultracentrifuge (Beckman Coulter OptimaL-90K ultracentrifuge; Beckman Coulter, Fullerton, CA, USA) was used with a rotor type SW 41 Ti.
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8

Permeation of PMD and Copolymer through Porcine Skin

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Porcine skin is a commonly employed alternative to human tissue in in vitro studies [3 ]. Full-thickness skin samples were mounted on glass Franz-type diffusion cells (n = 6 for each test), with diffusion areas of 3.14 cm2 and a receptor volume of 15 mL. Solutions (3 mg/mL) of PMD and the copolymer were prepared in water/ethanol (8:2 v/v) and 1 mL (3 mg) was dosed into the donor chamber. The Franz cells were placed in an incubator at 32 ± 1 °C; samples (1 mL) were taken periodically from the receptor compartment between 0.25 and 72.00 h, and were replaced with equivolume of the water/ethanol (8:2 v/v) receptor medium.
Following the 72 hrs permeation study, PMD and copolymer remaining in the tissue was assayed by tape stripping. The first two tape strips were assumed to account for analyte remaining on the skin surface, tape strips 3–10 accounted for deposition in the upper stratum corneum, and strips 11–20 showed analyte remaining in the lower stratum corneum. To extract the PMD or copolymer, tape strips were immersed in ethanol and sonicated for 15 min at room temperature. Any residual tissue was removed by filtration (0.45 μm filter, Thermo Fisher, United States), and the extraction liquid analysed by gel permeation chromatography (GPC) for the copolymer and LC-MS for PMD.
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9

Recombinant HNV-G Protein Expression

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The sequence of the extracellular region of G proteins from HeV and NiV (HNV-G) were codon-optimized, the tPA signal peptide and Strep-II tag were added at the N-terminus. Gene was synthesized (General Biosystems Co., Ltd.) and inserted into pcDNA3.1 (+).
The plasmid was transfected into Expi-293F cells for expression. After transfection, cells were placed on a shaker at 120 rpm and 37°C. After 72 hours of cell culture, the supernatant was centrifuged at 3,000 g for 15 min and filtered through a 0.45 μm filter (Thermo Fisher Scientific, USA). The protein was purified using the StrepTrap HP affinity column (GE Health Care, USA). Purified proteins were concentrated using 30 K ultrafiltration tubes (Merck Millipore, Germany) and permuted using PBS buffer at pH 7.4. Finally, the obtained proteins were characterized using SDS-PAGE and quantified with a BCA Protein Assay Kit (Thermo Fisher Scientific, USA).
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10

Dinoflagellate Culture Maintenance Protocol

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The thawed dinoflagellates were centrifuged (300× g, 5 min, 25 °C) for removing the CPA. Fresh FSW was added for resuspending the samples. The samples were then transferred into a 24-well microplate (Cosmo Biosciences Inc., CA, U.S.A.) which was sealed and stored in a culture incubator set to a 12 h light:12 h dark cycle (Kansin Instruments CO., LTD.). The culture medium was prepared by mixing 32 g of Coralife Salt Water Mix (WI, U.S.A) with 1 L of distilled water to create 32 ppt artificial seawater. After the Salt Water Mix was fully dissolved, 30 mL of Guillard’s f/2 medium and 1 mL of an antibiotic solution were added to 970 mL of the artificial seawater. Both the antibiotics (penicillin: 100 units/ml; streptomycin: 10 mg/ml) and Guillard’s f/2 medium were purchased from Sigma-Aldrich (St. Louis, MO., U.S.A.). The solution was filtered using 0.45 μm filter (Thermo Scientific Inc., Massa., U.S.A.) after it had evenly dissolved. The culture was replenished with fresh medium every two days. During the medium exchange, 10 μL aliquot of the culture was retrieved for cell counts.
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