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6 protocols using envision 2015

1

Measuring Cytoplasmic Calcium Changes

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To assess changes in cytoplasmic calcium concentration, we used Fluo-4 AM (Beyotime, #S1060, China). We seeded 150,000 PC-12 cells in 1 mL of cell culture medium with 10% FBS in a 24-well plate (growth area 1.9 cm2) and incubated them overnight. The cells were then exposed to different concentrations of VCNCs, CNCs, VNCs, 5-HT, CAT, and HSA for 3 h, as specified in Additional file 1: Table S5. After exposure, we washed the PC-12 cells twice with 1 mL of PBS and stained them in 0.5 mL of FBS-free DMEM medium containing 0.2 μM Fluo-4 AM for 0.5 h. The cells were then washed twice with PBS and kept stained for another 0.5 h. The fluorescence of Fluo-4 was detected using a microplate reader (Envision@2015, PerkinElmer, USA) at excitation and emission wavelengths of 488 nm and 520 nm, respectively.
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2

Anti-inflammatory Efficacy of Nanocapsules

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To assess the anti-inflammatory properties of nanocapsules after passing through bEnd.3 cells, we investigated their ability to scavenge ROS. 2ʹ,7ʹ –dichlorofluorescein diacetate (DCFH-DA) is commonly used to detect intracellular ROS levels. To induce intracellular ROS production, we added the ROSUP reagent (1:1000, Beyotime, #S0033S, China) to PC-12 cells in serum-supplemented medium for 0.5 h. The cells were pre-incubated with bEnd.3 cells containing nanocapsules in the transwell filter for texp + tinc = 3 h + 24 h. The PC-12 cells were then washed twice with PBS and incubated with 0.5 mL of 0.1% DCFH-DA (Beyotime, #S0033S, China) diluted in serum-free DMEM medium for 0.5 h at 37 °C. The cells were then washed twice with PBS and exposed to 0.5 mL of FBS-free DMEM medium. The fluorescence of DCFH was measured using a microplate reader (Envision@2015, PerkinElmer, USA) and an inverted fluorescence microscope (Eclipse Ti2, Nikon, Japan) at excitation and emission wavelengths of 488 nm and 520 nm, respectively. To investigate whether phenolic hydroxyl groups in 5-HT polymerization influences ROS concentration, we performed additional experiments using the same methods as described above. Further details of these experiments are provided in the supporting information.
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3

Quantifying aMMP-8 Levels in Mouth Rinse

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The aMMP-8 level from mouth rinse samples was determined by a time-resolved immunofluorescence assay (IFMA) as described by Öztürk et al. [40 (link)]. Briefly, aMMP-8-specific monoclonal antibodies 8708 and 8706 (Actim Oy, Espoo, Finland) were used in the analysis as a catching antibody and a tracer antibody, respectively. In this protocol, the diluted samples were allowed to incubate for 1 h with the Europium labelled tracer antibody. The fluorescence was measured using an EnVision 2015 multimode reader (PerkinElmer, Turku, Finland).
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4

Cell Proliferation Luminescence Assay

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Cell proliferation was assessed using the CellCounting-Lite 2.0 Luminescent Cell Viability Assay. After incubation of the cells, 100 μl of CellCounting-Lite reagent was added to each well and allowed to set at room temperature for 10 min to stabilize the luminescent signal. Luminescent signals were then detected using a multifunctional enzyme marker (PerkinElmer EnVision 2015).
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5

Neuroblastoma Cell Lines and Compound Screening

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The human NB cell lines (SK-N-SH, SH-SY5Y, SK-N-BE (2), and IMR-32) were obtained from the National Collection of Authenticated Cell Cultures in Shanghai, China.
SK-N-SH and IMR-32 cells were cultured in Dulbecco’s modified Eagle medium (DMEM) containing 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin–streptomycin mixture (Sigma-Aldrich). SK-N-BE (2) cells were cultured in DMEM/F12 (1:1) with 10% FBS and 1% penicillin–streptomycin mixture (Sigma-Aldrich). SH-SY5Y cells were cultured in a mixture of MEM (44.5%) and Ham’s F12 (44.5%), supplemented with 10% FBS (Gibco), 1% non-essential amino acids (NEAAs) (Gibco), and 1% penicillin–streptomycin mixture (Sigma-Aldrich). All cells were maintained in an incubator at 37°C with a humidified atmosphere containing 5% CO2.
Gomisin B and ginsenoside Rh2 chemical reagents were procured from MedChemExpress. Gomisin B (purity ≥99.9%) and ginsenoside Rh2 (purity ≥99.9%) were dissolved in dimethyl sulfoxide (DMSO). To ensure minimal impact on cells, the final concentration of DMSO in the cell culture medium was maintained below 0.1%.
Cell viability was assessed using the CellCounting-Lite 2.0 Luminescent Cell Viability Assay (Vazyme, DD1101-03) and measured using a multimode microplate detection system (PerkinElmer EnVision 2015). Aidi injection was donated by Guizhou Ebay Pharmaceutical Co., Ltd.
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6

Miniaturized NanoBRET Assay Protocol

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The NanoBRET assay was miniaturized from a 96-well format 16 by employing automated liquid dispensing. BRET measurements were made in white 384-well nonbinding surface plates (Corning). Cells were thawed and resuspended at 200,000 cells/mL in Opti-MEM without phenol red (Gibco) before seeding in a 384-well plate for a final count of 10,000 cells/well. Chemical compounds were resuspended in DMSO (Sigma-Aldrich, St. Louis, MO) and transferred to assay plates via acoustic dispensing (EDC Biosystems, Fremont, CA).
For the live-cell assay conditions, the plates were incubated for 2 h at 37 °C with 5% CO 2 supplementation. NanoBRET NanoGlo Substrate and Extracellular NanoLuc Inhibitor (Promega) were added according to the manufacturer's guidelines. Assay plates were incubated at room temperature for 2 h before adding NanoBRET NanoGlo Substrate (Promega).
For all BRET experiments, the Envision 2015 (PerkinElmer, Waltham, MA) equipped with a BRET2 Enh mirror and BRET 647 nM/75 nM Bandwidth and BC703 460 nM/80 nM Bandwidth filters was used for readouts. Each read was integrated for 0.5 s.
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