0.2 M NaH2PO4, 0.1 M ethylenediaminetetraacetic acid
[EDTA], 0.01 M cysteine, pH 6) at 60°C overnight. Glycosaminoglycan (GAG)
content was measured using a dimethylmethylene blue (DMMB; pH 3) assay with
chondroitin-6-sulfate (Sigma-Aldrich) as a standard. Absorbance ratio of 525/595
nm was measured using a spectrophotometer. DNA content in the digests was
quantified using a Quant-iT PicoGreen dsDNA assay (Invitrogen) according to the
manufacturer’s instruction. Collagen content was determined by measuring the
hydroxyproline content29 (link)
. Digested samples were lyophilized and hydrolyzed in 4 M NaOH
(Sigma-Aldrich) in Milli-Q water at 108°C overnight. The next day, samples were
neutralized using 1.4 M citric acid (Sigma-Aldrich) in Milli-Q water, after
which 50 mM freshly prepared Chloramin-T (Merck) in oxidation buffer was added.
Samples were incubated under agitation for 20 minutes, after which 1.1 M freshly
prepared dimethylaminobenzoaldehyde (Merck) in 25% (w/v) perchloric acid (Merck)
in 2-propanol (Sigma-Aldrich) was added. After incubation for 20 minutes at
60°C, samples were cooled and absorbance at 570 nm was measured using
hydroxyproline (Merck) as a standard.