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Nf κb p65 rabbit mab

Manufactured by Cell Signaling Technology
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NF-κB p65 rabbit mAb is a monoclonal antibody that specifically recognizes the p65 subunit of the NF-κB transcription factor complex. It is designed for use in various research applications, such as western blotting, immunoprecipitation, and immunohistochemistry, to detect and study the expression and localization of the NF-κB p65 protein.

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11 protocols using nf κb p65 rabbit mab

1

Lentiviral Knockdown of PNPLA7 in Mice

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WT C57BL/6 mice aged from 6 to 8 weeks were obtained from the Experimental Animal Center of Chongqing Medical University. The lentiviral pLVX IRES Puro constructs to express GFP and PNPLA7-GFP Mission® lentiviral pLKO.1 vectors encoding for scrambled shRNA or shRNAs targeting murine PNPLA7 were maintained in our lab [18 (link)]. LPS from Escherichia coli O111:B4 was obtained from Sigma. The MiniBEST Universal RNA Extraction Kit, PrimeScript™ II 1st Strand cDNA Synthesis Kit, and TB Green® Fast qPCR Mix were purchased from TaKaRa. A PNPLA7 rabbit antiserum was generated in our lab by immunizing rabbits with a peptide in the regulatory domain of mouse PNPLA7. The generation of this antiserum and its specificity have been previously described [17 (link)]. The SIRT1 mouse monoclonal antibody (mAb) was purchased from Santa Cruz Biotechnology and β-actin mouse mAb, α-Tubulin mouse mAb, GAPDH mouse mAb, NF-κB p65 rabbit mAb, NF-κB1 p105/p50 rabbit mAb, iNOS antibody (Mouse Specific), IκBα (44D4) Rabbit mAb, p38 MAPK rabbit mAb, and Phospho-p38 MAPK (Thr180/Tyr182) rabbit mAb were obtained from Cell Signaling Technology. Anti-SOCS1 antibody and Anti-NF-κB p65 (acetyl K310) antibody were obtained from Abcam. Goat anti-Rabbit IgG (H + L) Highly Cross-Adsorbed Secondary Antibody Alexa Fluor® 647 conjugate was purchased from Thermo Fisher Scientific.
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2

Kidney Protein Extraction and Western Blot

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Total proteins were extracted from the kidneys, separated on 10% SDS-polyacrylamide gels, and transferred onto PVDF membranes (Millipore, Bedford, MA). The membrane was blocked for 1 h with Tris-buffered saline (20 mM Tris-HCl, 140 mM NaCl, pH 7.6) containing 5% nonfat dry milk, washed with TBS containing 0.1% Tween-20, and incubated overnight at 4°C with a primary antibody. The primary RANKL rabbit mAb and RANK rabbit mAb were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). NF-κB p65 rabbit mAb, p-NF-κB p65 rabbit mAb, p-IκBα rabbit mAb, and IκBα mouse mAb were purchased from Cell Signaling Technology (Danvers, MA). β-actin mouse mAb and HRP-conjugated secondary antibodies were purchased from EarthOx (EarthOx, LLC, San Francisco, CA, USA). The protein band intensities were quantified with Quantity One 4.6.2 analysis software (Quantity One, Bio-Rad Laboratories, Inc., USA), which was provided with the Kodak 2000MM System (Eastman Kodak Company, Rochester, New York, USA).
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3

Characterizing Human Microglial Cell Responses

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The HMC3 human microglial cell line (ATCC CRL-3304) and EMEM medium (ATCC 30–2003) were purchased from American Type Culture Collection (ATCC, Manassas, VA). BrdU (59–14-3) and mouse anti-BrdU (B2531) monoclonal antibody (mAb) were purchased from Sigma (St. Louise, MO). BAY 11–7082 was obtained from Cayman Chemical (Ann Arbor, MI, cat# 10010266). Human IL-6 DuoSet ELISA (DY206) kits were purchased from R&D Systems (Minneapolis, MN). Phospho-p53 (Ser 15) antibody (#9284), p53 mouse mAb (#2524), NF-κB p65 rabbit mAb (#8242), p21 Waf1/Cip1 rabbit mAb (#2947), and β-Actin mouse mAb (#3700) were purchased from Cell Signaling (Danvers, MA). Alexa Fluor-594 labeled goat anti-mouse IgG (#A10680) and Alexa Fluor-647 labeled goat anti-rabbit IgG (#A21244) were purchased from Thermo Fisher (Waltham, MA). Mouse anti-human p16 mAb (cat# 51–1325GR) was obtained from BD Biosciences. Mouse anti-human CD68 mAb (Cat# 14–0688-82, clone: KP1) was obtained from Thermo Fisher. Pro-Long Gold Anti-Fade Reagent (#9071) was obtained from Cell Signaling Technology (Danvers, MA).
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4

Immunofluorescence Imaging of Autophagy Markers

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Primary fibroblasts were seeded on coverslips placed in 24-well plates. After treated with stimulus for the indicated time, the primary fibroblasts were fixed in 4% paraformaldehyde for 15 min at room temperature and washed three times with PBS. The fixed cells were then permeabilized with 0.1% saponin (47036-50G-F, Sigma) in PBS for 20 min and blocked with 10% bovine serum albumin in PBS for 1 h. The cells were incubated with primary antibody (LC3 mouse mAb, CAC-CTB-LC3-2-IC, Cosmo Bio; SQSTM1/p62 rabbit pAb, 18420-1-AP, Proteintech; NF-κB p65 rabbit mAb, 8242, Cell Signaling Technology) for 16 h at 4°C, and then incubated with secondary antibody [goat anti-mouse IgG (H&L) (Alexa Fluor 546), A-11003, Invitrogen; goat anti-rabbit IgG (H&L) (Cyanine5), A10523, Invitrogen; goat anti-rabbit IgG (H&L) (Alexa Fluor 647), A-21245, Invitrogen] for 1 h at room temperature. The cells were rinsed again and stained with DAPI (D1306, ThermoFisher). Samples were observed using a confocal microscope system (IX83-FV3000-OSR, Olympus).
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5

In Vitro Airway Epithelial Cell Study

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Human airway epithelial NCI–H292 cells were obtained from the American Type Culture Collection (Manassas, VA, USA). Invitrogen (Carlsbad, CA, USA) provided Roswell Park Memorial Institute (RPMI)-1640 medium, while GIBCO (Grand Island, NY, USA) supplied 10% fetal bovine serum (FBS). DEP was purchased from the National Institute of Standards and Technology (Gaithersburg, MD, USA). KRG and saponin samples were acquired from the Korean Ginseng Corp. (KGC) (Daejeon, Korea).
Daeil Lab (Seoul, Korea) supplied the EZ-Cytox Cell Viability Assay Kit. The primer sequences of MUC5AC were purchased from Qiagen (QT01329615; Hilden, Germany). Primary antibodies against MUC5AC (rabbit anti-MUC5AC, #sc-20118), horseradish peroxidase (HRP)-conjugated secondary antibodies (goat anti-rabbit immunoglobulin G-HRP, #sc-2004) and TLR4 antibody (#sc-293072) were procured from Santa Cruz (CA, USA). Phosphorylated form of NF-κB p65 rabbit mAb (#3033) and NF-κB p65 rabbit mAb (#4764) were acquired from Cell Signaling Technology (Danvers, MA, USA). For phosphorylation study, NOVUS donkey anti-rabbit (1:4000) secondary antibody was used. Sigma-Aldrich (St. Louis, MO, USA) supplied ovalbumin (OVA) and aluminum hydroxide.
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6

NF-κB p65 Chromatin Immunoprecipitation

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Dynabeads coupled with Anti-Rabbit secondary antibody (M-280; Thermo Fisher Scientific) were resuspended in 1 ml of Washing Buffer (Ca2 + and Mg2 + free (PBS), supplemented with 0.1% bovine serum albumin (BSA) and 2 mM EDTA, pH 7.4). With the help of a DynaMagTM−2 Magnet, the Dynabeads were washed. 5% BSA and NF-κB p65 Rabbit mAb (Cell Signalling Technology) were added to the beads and incubated with gentle tilting and rotation at RT for one hour. The unbound NF-κB p65 Rabbit mAb was removed using a DynaMagTM-2 Magnet. Dynabeads were washed with 5% BSA to ensure all unbound NF-kB p65 Rabbit mAb was removed.
These Dynabeads were then resuspended in the nuclei in 5% BSA and incubated for over 12 hours at 4 °C. The product obtained after the incubation was a tertiary complex comprised of Dynabeads coated with Anti-Rabbit secondary antibody, bound to NF-κB p65 Rabbit mAb, which was further bound to chromatin associated with NF-κB p65. The beads were washed with PBS, to ensure that the chromatin that was not associated with NF-κB p65 was washed off.
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7

Western Blotting of Lung Samples and Cell Lysates

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For western blotting analysis, the proteins of lung samples and cell lysates lysed by RIPA buffer (Beyotime, Shanghai, China) were separated using SDS-polyacrylamide gel electrophoresis. Subsequently, the proteins resolved in the gel were transferred to the polyvinylidene fluoride membrane (Millipore, MA, USA). Western blots were visualized using the ECL system (Fdbio Science, Hangzhou, China) and Quantity One software (Bio-Rad, USA) was used to analyze the intensity of individual bands. Data were normalized with β-actin as a loading control in each individual sample. The following antibodies were used in western blotting analysis: influenza virus NP rabbit pAb (1:2000), IFITM3 rabbit pAb (1:2000), IL-1β rabbit pAb (1:1200) and IL-6 rabbit pAb (1:1200) were provided by Abcam (MA, USA). Mfn2 mouse mAb (1:2,000) and IL-10 mouse mAb (1:2000) were obtained from Santa Cruz Biotechnology (CA, USA). β-actin rabbit pAb (1:2000) was from Bioworld (MN, USA). IFN-β rabbit pAb (1:500) was from OriGene Technology (MD, USA). p-IRF3 rabbit mAb (1:1000), NF-κB p65 rabbit mAb (1:2000) and TNF-α rabbit pAb (1:2000) were provided by Cell Signaling Technology (MA, USA). MAVS rabbit pAb (1:500) and STING rabbit pAb (1:500) antibodies were obtained from Proteintech Group (IL, USA).
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8

Protein Expression Analysis Using Western Blot

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Cells were treated in α-MEM containing 2 μg/mL Hlb for the indicated minutes. To extract total cell protein, cells were harvested after washing with cold PBS and lysed with cold RIPA lysis buffer containing protease and phosphatase inhibitors. The samples were resolved on a 12% SDS-PAGE and electroblotted onto polyvinylidene fluoride (PVDF) membranes. Anti-STAT5A Ab, phospho-STAT5A Ab (BBI Life Sciences), phospho-STAT4 Ab, STAT4 rabbit mAb, NF-κB p65 rabbit mAb, phospho-NF-κB p65 rabbit mAb, p44/42 MAPK rabbit mAb, phospho-p44/42 MAPK rabbit mAb (Cell Signaling Technology), anti-GAPDH, and horseradish peroxidase-conjugated goat antibodies against rabbit IgG and mouse IgG (Jackson ImmunoResearch Laboratories) were used. Finally, the blots were detected using Pierce™ ECL Western Blotting Substrate (Thermo).
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9

Investigating Lupus-Associated Immune Dysregulation

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The Csf-1-deficient mice were purchased from The Jackson Laboratory, and C57BL/6 mice were purchased from Nanjing University. All mice were housed in the animal facility of Nanjing Medical University.
Sera of SLE patients were collected from The First Affiliated Hospital of Nanjing Medical University. We adopt the criteria of the American College of Rheumatology as the classification of SLE. All patients had SLE disease-activity index scores ranging from 0 to 20.
Protein G agarose was purchased from Millipore. FITC-conjugated CTB, methyl-β-cyclodextrin (MβCD) and β-estradiol 6-(O-carboxy-methyl)oxime: BSA (E2-BSA) were purchased from Sigma-Aldrich. G15 was purchased from TOCRIS bioscience. ICI 182,780 (Fulvestrant), a specific antagonist of nuclear estrogen receptors, was purchased from Santa Cruz Biotechnology.
Anti-CD11b, TNF-α, and MCP-1 antibodies were purchased from Abcam. Anti-phospho-NF-kB p65 rabbit mAb, NF-κB p65 rabbit mAb, and GAPDH rabbit mAb antibodies were purchased from Cell Signaling Technology. Anti-CD3, CD20, GPER1, and CD64 antibodies were purchased from Santa Cruz Biotechnology.
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10

NFκB Activation Monitoring in P. acnes-Infected HaCaT Cells

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Heat-killed P. acnes-infected HaCaT cells were treated with Ce6-mediated PDT, after which the cells were fixed with 4% paraformaldehyde in PBS for 20 min and permeabilized with 0.5% Trixon X-100 for 15 min. After 1 h incubation with blocking buffer (5% BSA in PBS), the cells were incubated with primary antibodies (NFκB p65 Rabbit mAB) (1:100) (Cell Signaling Technology, Inc., MA, USA) in 0.5% BSA for overnight at 4°C. The cells were washed in PBS for 10 min, done 3 times, and were stained for another 1 h with goat anti-rabbit IgG Texas red (1:1000) (Santa Cruz Biotechnology, Inc., USA). Nuclei were counterstained with 4, 6-diamidino-2-phenylindole dihydrochloride (DAPI) (Bio-Rad, USA). The prepared cells were then observed under a fluorescent microscope and images were recorded.
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