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4 protocols using 17 octadecynoic acid 17 odya

1

Lymphocyte Isolation and Lipid Mediator Analysis

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Lymphocyte separation medium, aprotinin, dimethyl sulfoxide (DMSO) and solvents for HPLC and LC/MS were purchased from Thermo Fisher Scientific (Ottawa, Ontario, Canada). Dextran, adenosine deaminase, leupeptin and potassium phosphate were obtained from Sigma-Aldrich Canada (Oakville, Ontario, Canada). HBSS was purchased from Wisent Bioproducts (St-Bruno, Quebec, Canada). 19-OH-prostaglandin (PG) B2, PGB2, PGB2-D4 and 17-octadecynoic acid (17-ODYA) were purchased from Cayman Chemicals (Ann Arbor, Michigan, USA). PF-4708671 was obtained from Abcam (Cambridge, Massachusetts, USA) and LY2584702 from Selleckchem (Houston, Texas, USA). Thapsigargin was obtained from Tocris Bioscience (Ellisville. Missouri, USA). LTB4 was a generous gift from Dr Louis Flamand (Université Laval, Québec City, Canada). Recombinant CYP4F3A and the NADPH regenerating system were purchased from Corning (Corning, New York, USA). Protease and phosphatase inhibitor cocktail tablets were purchased from Roche (Laval, Quebec, Canada). Primary (anti-phospho-S6 #2211 and anti-S6 #2317) and secondary antibodies were obtained from Cell Signaling (Danvers, Massachusetts, USA). The enhanced chemiluminescent (ECL) substrate was obtained from Millipore Canada Ltd (Toronto, Ontario, Canada).
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2

Modulating Nematode-Candida Interactions

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Nematode growth medium agar with 10 ml 0.1% Tergitol was supplemented with 0.01 mM of EPA as described. Synchronised L2 C.elegans nematodes were grown for 24 h on NGM agar plates with or without 0.01 mM EPA, seeded with E.coli OP50 until they reached L3 stage. Thereafter, the L3 nematodes were carefully harvested and washed three times with sterile M9 buffer. L3 nematodes were transferred to fresh plates and pre-treated for 24 h with 17-octadecynoic acid (17-ODYA) or 6-(2-propargyloxyphenyl)hexanoic acid (PPOH) (Cayman Chemicals) until they reached L4 stage. The compounds were added directly to the bacterial food at a final concentration of 0.05 mM [37 (link), 38 (link)]. In all cases, solvent controls were included. L4 nematodes were infected with C.albicans and 60 nematodes were transferred into 2 ml of liquid medium (80% M9 buffer, 20% BHI, 90 μg/ml kanamycin) in a single well of a six-well tissue culture plate and incubated at 25 °C. Hyphal formation was monitored after 24 h of incubation. In addition, nematodes exposed to EPA and 17-ODYA were monitored for survival by scoring them as either alive or dead. If nematodes did not show any movement in response to mechanical stimulation, they were considered dead and thus removed from liquid medium assay [25 (link)].
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3

Protocols for Prostaglandin Pathway Modulation

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Carbaprostacyclin (cPGI2), AL 8810, baicalein, and 17-octadecynoic acid (17-ODYA) were purchased from Cayman Chemical. 15-Deoxy-Δ12,14 PGJ2, PGE2, PGF, SC-560, SC-236, and indomethacin were all purchased from Sigma-Aldrich. PD98059, U0126, and GF109203X were obtained from Enzo Life Sciences and BAPTA-AM from Tocris Bioscience.
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4

Cell Membrane Protein Labeling and Imaging

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DiIC12 was purchased from Life Technology (Eugene, USA). NBD-PE was purchased from Avanti (Alabaster, USA). anti-myc AlexaFluora-647, anti-biotin, and anti-myc were purchased from Cell Signaling Technologies (Danvers, USA). DTT, tris(2-carboxyethyl)phosphine (TCEP), and 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) were purchased from Research Products International (Mount Prospect, USA); DTT was prepared fresh for every use. Paraformaldehyde (PFA) was purchased as a 16% stock solution from Electron Microscopy Sciences (Hatfield, USA). CaCl 2 , NaCl, CuCl 2 , Tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine (TBTA), anti-myc magnetic beads and propidium iodide were purchased from Fisher Scientific (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.
The copyright holder for this preprint this version posted January 29, 2020. ; https://doi.org/10.1101/2020.01.28.923771 doi: bioRxiv preprint (Fair Lawn, USA). 17-Octadecynoic Acid (17-ODYA) and biotin-azide were purchased from Cayman Chemicals (Ann Arbor, USA). HeLa cell lines were acquired from ATCC (Manassas, USA). Primary rat Schwann cells (RSCs) were a generous gift from the lab of Dr. Bruce Carter at Vanderbilt University.
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