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12 protocols using 1260 infinity 2 lc

1

Quantitative Analysis of Sugars and Organic Acids

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The extracts used for sugar analysis were also used for organic acid analysis. Analysis was performed on an Agilent (UK) 1260 Infinity II LC with an Infinitylab XT MSD and a diode array UV detector (Agilent, UK). Samples (20 µL) were separated through an H-phase ion-exchange column (Agilent, UK, 300 × 7.7 mm Hi-Plex H) heated at 65 °C at a flow rate of 0.5 mL/min. The mobile phase was water with 0.01 M sulfuric acid. Each acid was identified by comparing the retention time and MS with those of authentic standards. The MS operated in both positive and negative scan modes between 50 and 250 m/z, with a fragmentor voltage of 135 V, a capillary voltage of 3500 V, and a nozzle voltage of 2000 V. The gas temperature in the source was 300 °C, and the nebuliser pressure was 1.38 bar. The diode array detector operated at wavelengths of 220 and 275 nm. Quantitation was performed by comparing diode array areas against a calibration curve (5 points, 50–1000 mg/L in the extracts) for each sugar.
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2

Characterization of Organic Compounds

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1H and 13C NMR experiments were performed in D2O or CDCl3 at 600 MHz for 1H and 151 MHz for 13C nuclei on a Bruker Avance III Ultrashield 600. 2D NOE experiments were performed on a Bruker Avance-III-800 console equipped with a Bruker 18.8 T/54 mm Ascend Magnet at 25 °C. Preparative HPLC was conducted using an Agilent 1260 Infinity II LC equipped with an Agilent Eclipse XDB-C18 column (250 mm × 21.2 mm, 7 μm). Analytical HPLC was performed on an Agilent 1260 Infinity II system equipped with an Agilent 5 HC-C18(2) column (150 × 4.6 mm, 5 μm). GC-MS experiments were run on a ThermoScientific Trace GC Ultra spectrometer equipped with an Rxi-5MS column (Restek Corp., 30 m × 0.25 mm i.d., 0.25 μm df). The injection temperature was 250 °C, electron ionization was performed with 70 eV, ion source temperature was 250 °C, transfer line temperature was 280 °C, and mass scan range was from m/z 30–500 at 1500 μ s−1. The program held at 50 °C for 3 min, increased the temperature at a rate of 20 °C min−1 up to 300 °C, and then was maintained at 300 °C for 3 min. Optical rotations were measured on a JASCO P-1010 polarimeter.
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3

Characterization of Novel Compounds

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All starting materials were synthesized following published literature procedures from commercially available reagents and solvents.32 36 (link) 1H NMR and 13C NMR were obtained using a Bruker Advance III 400 with Sample Xpress Lite auto sampler. UV/Vis spectra were obtained in DMSO using an Agilent Technologies Cary 8454 UV/Vis spectrometer. High-resolution mass spectra were obtained on an Agilent Technologies 6520B Accurate-Mass Q-TOF MS with a Dual ESI ion source interfaced to an Agilent Technologies 1260 Infinity II LC. MALDI measurements were made with a MassTech AP-MALDI(ng) HR ion source attached to the Agilent 6520B Q-TOF MS using a CHCA matrix.
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4

Extraction and Quantification of Mulberry Anthocyanins

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The extraction and determination of anthocyanins from mulberry fruit were performed using a previously described method [42 ]. Anthocyanin extraction was carried out using acidified methanol (methanol and 1.0 N HCl, 85:15, v/v), assisted by ultrasonic disruption. The extracts were concentrated by evaporation at 50 °C using a rotary evaporator, and were then re-dissolved in acidified methanol. Individual anthocyanins were separated and quantified using a high-performance liquid chromatography (HPLC) system (1260 Infinity II LC, Agilent Technologies Inc., CA, USA), coupled to a dual wavelength ultraviolet–visible detector and a data acquisition system (Millennium Chromatography Manager version 2.15.01; Waters Corporation, MA, USA). A reversed-phase chromatography column (Supelcosil LC-18-dB, 25 cm × 4.6 mm i.d.; Agilent) was used at room temperature.
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5

NMR and HPLC-MS Analysis of Organic Compounds

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NMR data were acquired on a Bruker Avance III 800 MHz spectrometer equipped with a 5 mm TCI cryoprobe, with the residual solvent used as an internal standard (CDCl3, δH 7.26, δC 77.16 ppm). High resolution (HR)TOFMS (ESI+) and tandem MS data were recorded on an Agilent 1260 infinity II LC coupled to a 6545 QToF MS. The mobile phase consisted of ultra-pure H2O (A) and ACN (B) with 0.1% formic acid. A gradient method from 15% B to 90% B in 9 min at a flow rate of 0.4 mL/min was used. The column (Phenomenex Kinetex C18, 2.6 μm, 100 Å, 50 mm x 2.1 mm) was re-equilibrated before each injection and the column compartment was maintained at 40 ˚C throughout each run. Semi-preparative HPLC (Phenomenex Kinetex C18, 5 μm, 100 Å, 250 mm x 10 mm) utilized isocratic elution conditions or a gradient system with a flow rate of 4 mL/min on a Shimadzu LC-20AD HPLC system operating at room temperature, equipped with an SPD-M20A photodiode array detector. All samples were filtered through a 0.2 μm nylon filter or centrifuged at 14,000 rpm for 5 min before LC–MS and HPLC analysis. General reagents were from VWR International.
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6

HPLC-RI Analysis of Metabolites

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Substrate utilization and metabolite formation were analysed using a high‐performance liquid chromatography with refractive index detector (HPLC‐RI) as described (Ghiamati Yazdi et al., 2022 ). Briefly, a 1260 Infinity II LC (Agilent Technologies) supplied with Hi‐Plex H guard and main column (300 × 7.7 mm. 8 μm particle size) was used. Samples (10 μL) were eluted with 5 mM H2SO4 as the mobile phase at a flow rate of 0.6 mL min−1 at 40°C. Calibration curves were prepared from external standards to enable compound quantification.
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7

HPLC-DAD-ELSD Analysis of Compounds

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All experiments were performed on a 1260 infinity II LC (Agilent Technologies, Santa Clara, CA, USA). The isolated compounds and extract were dissolved in methanol at the concentration of 1 and 3 mg/mL, respectively. They were filtered through Millipore 0.20 μm filters before injection for chromatographic separation (Millex-LG, Tokyo, Japan). Then, 5 μL of each was injected and the flow rate was 0.4 mL/min. The separation was performed on YMC triart-C18 column (4.6 × 150 mm, 5 μm), (YMC Company, Kyoto, Japan) at 40 °C with the gradient system of 0.1% formic acid in water (solvent A) and 0.1% formic acid in methanol (solvent B) as follows 0–2 min, 20% B; 2–22 min, 20–100% B; 22–30 min, 100% B, finally the B content was reduced to the initial conditions in 5 min and the column was re-equilibrated for 5 min. The diode array detector (DAD) was measured over the rage of 200–600 nm. The evaporation temperature of the ELSD detector was set at 80 °C. The nebulizer temperature of the ELSD detector was set at 30 °C.
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8

Sonochemical Oxidation Quantification Methods

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Sonochemical oxidation reactions were quantified using KI dosimetry and BPA degradation for zero- and first-order reaction analyses, respectively [9] , [23] (link), [28] , [34] (link). The initial concentrations of the KI solution and BPA were 10 g/L (60.2 mM) [7] , [10] (link), [11] , [35] and 10 mg/L (0.043 mM), and the irradiation times were 20 min and 120 min, respectively. The final sonochemical product, triiodide (I3), was detected using an UV–Vis spectrophotometer (Libra S60; Biochrom Ltd., UK), while BPA was detected using an HPLC system (1260 Infinity II LC, Agilent, USA).
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9

Synthesis and Characterization of Novel Compounds

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All starting materials were synthesized following published literature procedures from commercially available reagents and solvents.32–36 (link)1H NMR and 13C NMR were obtained using a Bruker Advance III 400 with Sample Xpress Lite auto sampler. UV/Vis spectra were obtained in DMSO using an Agilent Technologies Cary 8454 UV/Vis spectrometer. High-resolution mass spectra were obtained on an Agilent Technologies 6520B Accurate-Mass Q-TOF MS with a Dual ESI ion source interfaced to an Agilent Technologies 1260 Infinity II LC. MALDI measurements were made with a MassTech AP-MALDI(ng) HR ion source attached to the Agilent 6520B Q-TOF MS using a CHCA matrix.
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10

High pH Fractionation of Protein Digests

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Protein digests were fractionated using high pH reverse-phase chromatography. A C18 column (150 × 2.1 mm inside diameter Kinetex EVO [5 µm, 100 Å]) was used with an HPLC system (LC 1260 Infinity II; Agilent). Modules were controlled by Chemstation rev 01.07 SR2. Solvent A (98% water, 2% acetonitrile) and solvent B (90% acetonitrile and 10% water) were adjusted to pH 10.0 using ammonium hydroxide. Samples were injected manually through a Rheodyne valve onto the reverse phase–high performance liquid chromatography (RP-HPLC) column equilibrated with 1% solvent B and kept at this percentage for 3 min. A two-step gradient was applied at a flow rate of 200 µl/min (from 1–25% B in 42 min and then from 25–43% B in 8 min) followed by an 8-min washing step at 100% solvent B and an 8-min reequilibration step. Column eluate was monitored at 220 and 280 nm via a variable wavelength detector and collected using an Agilent 1260 infinity fraction collector. Column eluate was collected from 4 to 63 min and divided in 21 fractions.
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