The largest database of trusted experimental protocols

5 protocols using ham s f12 medium

1

Aggregation and Disassembly of Amyloid-beta

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human Aβ1-42 peptide, HFIP-pretreated (Anaspec) was diluted (5 mM) in anhydrous DMSO and then in phenol red-free Ham’s F12 medium (PanBiotech) at 100 μM as previously described68 (link). Aliquots were immediately frozen and stored at −80 °C. Before aggregation, 100 μM Aβ1-42 in Ham’s F12 was diluted at 65 μM by adding scFvA13 or NaPB buffer (NaCl 100 mM, sodium phosphate buffer pH7, 20 Mm) as control. The scFvA13 was used at stoichiometric (65 μM) or substoichiometric (13 μM) ratio with Aβ1-42. The aggregation was performed at 22 °C for 24 h. For disassembly assays, stoichiometric (65 μM) or substoichiometric (13 μM) concentrations of the scFvA13 or the NaPB buffer as control were added to Aβ1-42 in Ham’s F12 (preassembled at the concentration of 100 μM, 22 °C for 24 h) obtaining a final concentration of 65 μM Aβ. The disassembly assay was performed at 22 °C for 24 h.
Synthetic Aβ samples, not boiled nor treated with reducing agents, were loaded (30 ng per well) in Bis-Tris XT Criterion Gels (Bio-Rad), run in MES buffer and analysed by WB, as described above by 6E10 (Covance), 4G8 (Covance) or by a rabbit mAb anti-Aβ (D54D2, Cell Signalling).
+ Open protocol
+ Expand
2

Promoter Activity Assay in AML12 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
AML12 hepatocytes (ATCC® CRL-2254™) were cultured in a 1:1 mixture of Dulbecco's modified Eagle's medium and Ham's F12 medium (PAN-biotech, Aidenbach, Germany) supplemented with 5 μg/ml insulin (Roche Life Science, Germany), 5 ng/ml transferrin (Sigma–Aldrich, St. Louis, Missouri, USA), 5 μg/l selenium (Sigma–Aldrich), and 40 μg/l dexamethasone (Sigma–Aldrich) as well as 10% (v/v) fetal bovine serum (Biochrom, Berlin, Germany). Cells were seeded in 48-well plates (4 × 104 cells per well) 24 h prior to transfection using Lipofectamin 2000 transfection reagent (Invitrogen, Thermo Fisher Scientific, Massachusetts, USA). Transfection was performed in triplicates with either 500 ng unmethylated or methyltransferase treated pCpGL-Hamp promoter as well as 5 ng pRL-TK vector (Promega, Wisconsin, USA) expressing constitutively Renilla luciferase as an internal control. Luminescence was measured 48 h after transfection using dual-luciferase reporter assay system (Promega). Firefly luciferase activity was normalized to its Renilla luciferase transfection control. The calculated values of the unmethylated plasmid were used as 100% of relative promoter activity.
+ Open protocol
+ Expand
3

Oligomeric Amyloid-Beta Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
1–42 peptide and FAM-labeled Aβ1–42 peptide were purchased from Biopeptide (Sunnyvale, CA, USA, Cat. 1-800-909-2494); oAβ was prepared as previously described [25 (link), 41 (link)]. Briefly, 1 mg Aβ1–42 peptide or FAM-labeled Aβ1–42 peptide were dissolved in 1 mM hexafluoroisopropanol for 1 h. After air drying, the peptide film was dissolved in dimethyl sulfoxide (Sigma; Cat. D2650), then diluted in Ham’s F12 medium (PAN-Biotech, Aidenbach, Bavaria, Germany; Cat. P04-14559) to a final concentration of 100 μM. After incubation at 4°C for 24 h, the solutions were centrifuged to remove fibrillar and insoluble Aβ aggregates. The supernatant was designated oAβ. NG and HG mixed glia were incubated with 4 μM oAβ which was calculated from the initial amount (1 mg) of Aβ1–42 monomer applied in the oligomerization reaction.
+ Open protocol
+ Expand
4

Cell Line Maintenance and 3D Tumor Spheroid Culture

Check if the same lab product or an alternative is used in the 5 most similar protocols
For maintaining Mel270 and 92-1 cell lines, RPMI 1640 medium (GIBCO, Fisher Scientific, Thermo Fisher Scientific Inc., Waltham, MA, USA) was used, supplemented with 1% penicillin–streptomycin (5000 U/mL, PAN BIOTECH, Aidenbach, Germany) as well as 10% fetal calf serum (Sigma-Aldrich, St. Louis, MO, USA/Chemie GmbH, Steinheim, Germany). UPMD2 and UPMM3 were kept in Hams/F12 medium (PAN-Biotech GmbH, Aidenbach, Germany) and the respective supplements. The medium was renewed twice weekly. The cell lines were incubated in a humidified incubator (37 °C, 5% CO2).
3D tumor spheroids were grown in round-bottom 96-well ultra-low attachment plates (PHC Corporation, Tokyo, Japan) using 5 × 103 living cells and 100 µL of the respective cell culture medium per well. Spheroids were grown for 7 days, while medium was refreshed once weekly, as described before [42 (link)].
+ Open protocol
+ Expand
5

Methylation-dependent Igfbp2 Promoter Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
The murine AML12 cell line (ATCC® CRL-2254™) was cultured in a 1:1 mixture of Dulbecco’s modified Eagle’s medium and Ham’s F12 medium (PAN-Biotech, Germany) with 0.005 mg/ml insulin (Roche Life Science, USA), 0.005 mg/ml transferrin (Sigma-Aldrich, USA), 5 ng/ml selenium (Sigma-Aldrich, USA) and 40 ng/ml dexamethasone (Sigma-Aldrich, USA) supplemented with 10% fetal bovine serum (Biochrom, Germany). Cells were maintained in humidified air replenished with 5% CO2. In a 48-well plate, 4 × 104 AML12 cells/well were co-transfected using Lipofectamine®2000 (Invitrogen, USA) with 500 ng/well unmethylated or methylated pCpGL-Igfbp2 and 5 ng/well pRL-TK Renilla control vector (Promega, USA). After 48 h, cells were harvested and analyzed for firefly and renilla luciferase activity using the dual-luciferase reporter assay system (Promega, USA). Firefly luciferase activity was normalized to its renilla luciferase transfection control.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!