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16 protocols using anti pd l1 apc

1

Crassolide Modulates Immunogenic Cell Death

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The 4T1-luc2 tumor cells were treated with crassolide (50 to 3.125 µM) for 24 h. Aliquots of 1 × 106 4T1-luc2 tumor cells were harvested, washed with PBS, and stained with PE anti-HSP90 antibody (LSBio, LS-63265), Alexa Fluor 488 anti-Hsp70 antibody (BioLegend, #648004), PE anti-HMGB1 antibody (BioLegend, #651404), PE anti-calreticulin (Cell signaling, #62304), APC anti-PD-L1 (BioLegend, #124312), Alexa Fluor 488 anti-CD24 (BioLegend, #101816) in 0.5% bovine serum albumin (BSA, Bionovas) in PBS, and then analyzed using flow cytometry (BD FACSVerse, San Jose, CA, USA).
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2

PD-L1 Expression Analysis in Transfected Cells

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Five days post-transfection, cells were lifted from culture plates in FACS buffer (ThermoFisher Scientific). Cells were stained with APC-anti-PD-L1 (1:250, BioLegend, #329708). Data from 10,000–15,000 cells were collected on a Guava easyCyte 12HT (EMD Millipore) flow cytometer. FMO was used to determine the positive gate. PD-L1 antibody was validated via overexpression using cDNA from the PD-L1/TCR Activator Mammalian Expression Kit purchased from BPS Bioscience (Cat# 60610). cDNA and TCR activator were specially requested not to be mixed.
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3

Flow Cytometric Analysis of Dendritic Cells and Monocytes in Tumor Microenvironment

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Mononuclear cells (1 × 106 cells) isolated previously from PB, PF, and tumor tissue were incubated with fluorochrome-labeled monoclonal antibodies (mAbs) against cell-surface markers: anti-BDCA-1 FITC (MACS Miltenyi), anti-CD19 PerCP-Cy5.5 (BD Pharmingen), anti-BDCA-2 FITC (MACS Miltenyi), anti-CD123 PE-Cy7 (Biolegend), anti-CD45 FITC (BD Pharmingen), anti-CD14 PE-Cy7 (BD Pharmingen), anti-PD-L1 APC (Biolegend), and anti-PD-L2 PE (Biolegend) for 20 min at room temperature. Then, the cells were washed twice with PBS, and the percentage of myeloid BDCA-1+CD19 DCs and plasmacytoid BDCA-2+CD123+ DCs, and CD45+CD14+ MO/MA with PD-L1 or PD-L2 expression was analyzed using flow cytometry (FACSCanto I Becton Dickinson, USA). The frequency of mDCs, pDCs, and MO/MA are presented as the percentage of mononuclear cells. For each tube, 100,000 events were acquired and analyzed using FacsDiva software. The expression levels of PD-L1/PD-L2 are presented as the percentage of total respective cell subsets (i.e., myeloid BDCA-1+CD19, plasmacytoid BDCA-2+CD123+ DCs, and CD45+CD14+ MO/MA). The method of identification pDCs with PD-L1/PD-L2 expression is presented in Figure 13.
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4

Comprehensive Immunophenotyping of haNK Cells

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The cetuximab (Bristol-Myers Squibb, New York, NY), trastuzumab (Genentech, San Francisco, CA), pertuzumab (Genentech) and isotype (rituximab, Genentech) antibodies were purchased from the National Institutes of Health Pharmacy. Flow cytometry of haNK cells was performed on a BD LSRII flow cytometer (BD Biosciences, San Jose, CA) and analyzed in FlowJo 9.9 (TreeStar Inc., Ashland, OR). Flow cytometry of tumor cells was performed on a BD FACSVerse flow cytometer (BD Biosciences) and analyzed in BD FACSuite (BD Biosciences). Staining of haNK cells was performed with four panels, and the antibodies used were: Anti-CD56-PErCP-Cy5.5, anti-CD16-APC-Cy7, anti-NKG2D-APC, anti-NKG2D-FITC, anti-CD107a-PE-Cy7, anti-GranzymeB-FITC, anti-perforin-APC, anti-NKp46-PE-Cy7, anti-NKp30-APC, anti-NKp44-PE, anti-2B4-FITC, anti-CD158a-PE, anti-CD158d-PE, anti-CD158j-APC, anti-PD-1-PE-Cy7, anti-PD-L1-APC, and anti-MICA-PE; all were obtained from BioLegend (San Diego, CA). Anti-CD56-PE, anti-CD16-PE-Cy7, CD11a-PE, Ki67-FITC, anti-HLA-ABC-FITC and anti-4-1BB-BV421 were obtained from BD Biosciences. In controlled experiments to detect CD16 on haNK cells, the anti-CD16 MAb was CD16-FITC (BD Biosciences) and the isotype control antibody was MIgG1k-FITC (BD Biosciences).
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5

Characterizing Dendritic Cell Phenotype

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Before staining, FcγR were blocked using the Human TruStain FcX Solution (BioLegend) for 10 min at room temperature in PBS 2% FBS. Cells were then stained for 15 min at 4°C in PBS 2% FBS with one or more of the following Ab: anti- CD14-AF700 (BioLegend), anti-DC-SIGN-AF647 (BioLegend), anti-CD1a-AF488 (BioLegend), anti-CD83-PE (BioLegend), anti-CD86-Pacific Blue (BioLegend), anti-CD40 PE (BioLegend), anti-CD80 Pacific Blue (BD Biosciences), anti-PD-L1 APC (BioLegend), anti HLA-DR A700 (BioLegend).
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6

Flow Cytometric Analysis of PD-L1 Expression

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ES-2 and ES-2.PDL1KO cells were suspended in 100 µL of PBS, stained (30 min, 4 °C) with anti-PDL1-APC (Biolegend) or mouse IgG2a-APC (Biolegend) as isotype control, washed with PBS and analyzed by flow cytometry. After 4 days of coculture with ES-2scFv:CD3-mcherry cells, CD3+ T-cells were furthermore collected and stained for CD4 (anti-CD4-FITC; Immunotools), CD8 (anti-CD8-Pacific Blue; Beckman Coulter), CD25 (mouse anti-CD25-APC; Immunotools), mouse anti-41BB-APC (Immunotools) and with the zombie NIR fixable viability kit (Biolegend).
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7

Immunophenotyping of Cholangiocarcinoma Cells

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Human cholangiocarcinoma cell lines HuCCT1 and TFK1 were treated with gemcitabine (10 μM) or oxaliplatin (3 mg/ml) for the indicated time; the cells were detached and stained with anti-PDL1-APC (BioLegend, 323124). For peripheral lymphocyte assay, human blood cells were collected and mononuclear cells were purified with Ficoll gradient centrifugation; the cells were stained with anti-CD4-APC, anti-CD8a-FITC, anti-CD3-PerCPCy5.5, anti-CD19-PE, anti-CD56-PECy7, and anti-CD28-PB (BioLegend). Flow cytometry assay was performed on BD LSRFortessa and analyzed with FlowJo (BD).
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8

Comprehensive Immune Profiling of Pancreatic Tumors

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Pancreatic tumour cell lines, MDDC and T-cells were assessed for expression of different markers using the following antibodies: Anti-PDL-1 APC, anti-Galectin 9 PE, anti-CD39 FITC, anti-CD47 Percp-Cy5.5, anti-HLA-class I Alexa Flour 700, anti-MIC A/B PE, anti-ULBP1 FITC, anti-ULBP 2,5 6 Percp, anti-ULBP 3 APC,anti-CD86 PE, anti-CCR7 PE-CY7, anti-CD40 APC, anti-HLA-class II PE-CY5 anti-IFN-γ PE-CY7, anti-CD3 Alexa Flour 488, anti-CD4 APC-CY7, anti-CD8-PE and anti-CD69 APC (Biolegend, CA).
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9

Comprehensive Flow Cytometry Immunophenotyping

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For flow cytometry analysis, tumor and blood samples were stained with a cocktail of monoclonal mouse anti-human conjugated antibodies (mAbs): anti-CD45-PercP (clone HI30), anti-CD3-PercP (HIT3a), anti-CD3-APC (UCHT1), anti-CD19-PE (HIB19), anti-CD15-PE (HI98), anti-CD161-FITC (HP-3G10), anti-CD4-FITC (OKT4), anti-CD8-PE (HIT8a), anti-HLA-DR-APC (L243), anti-CD127-PE-Cy7 (A019D5), anti-CD1c-APC-Cy7 (L161), anti-CD163-PE (GHI/61), anti-CD206-APC-Cy7 (15–2), anti-PD-1-FITC (EH12.2H7), anti-PD-L1-APC (29E2A3), anti-CTLA4-PE (L3D10), anti-CD69-APC-Cy7 (FN50), anti-Tim3-APC (F38-2E2), anti-IL-8-APC (E8N1), anti-IFN-γ-PE (4S.B3), anti-IFN-γ-APC-Cy7 (4S.B3), anti-Granzyme B-FITC (QA16A02), anti-IL-1β-FITC (JK1B-1), anti-IL-2-PE-Cy7 (MQ1-17H12), anti-IL-6-APC (MQ2-13A5), anti-IL-17-FITC (BL168), anti-IL-23/IL-12-PE (C11.5), anti-TGF-β-APC (TW4-6H10), all from Biolegend; anti-IDO-PE (eyedio) and anti-IL-10-FITC (BT-10), both from eBioscience; anti-CD25-PE (MEM-181) and anti-CD11b-FITC (LT11) from ImmunoTools.
The antibodies used for immunofluorescence were: mouse monoclonal anti-human CD8 (32-M4) from Santa Cruz Biotechnology and rabbit polyclonal anti-human HLA-DRA from Sigma Aldrich.
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10

Comprehensive Tumor Immune Profiling

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Tumors were harvested and homogenized using 40 μm cell strainers. Tumor cells were then washed and resuspended in PBS at 5 × 106/mL. Single-cell suspensions were run on BD FACSCelesta Cell Analyzer (BD Biosciences, Franklin Lakes, NJ, USA) and analyzed on FlowJo Software (FlowJo, Ashland, OR, USA). Single-cell suspensions were stained using antibody list anti-CD45 Pe/Cy7 (BioLegend, San Diego, CA, USA), anti-CD11b BV785 (BioLegend), anti-CD3 Alexa Fluor700 (eBioscience, San Diego, CA, USA), anti-Ly6G PacBlue (BioLegend), anti-Ly6C PerCp/Cy5.5 (Biolegend), anti-CD-161 APC (BioLegend), anti-CD335 BV650 (BioLegend), anti-CD8 Alexa Fluor 488 (BioLegend), anti-CD11b APC Cy7 (BioLegend), anti-CD64 BV605 (BioLegend), anti-MHCII AlexaFluor488 (BioLegend) and anti-PDL1 APC (Biolegend).
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