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TRAF3 is a protein that functions as an adaptor molecule, facilitating the interaction between various signaling proteins. It is involved in the regulation of cellular processes such as immune response, inflammation, and cell survival. The core function of TRAF3 is to serve as a signaling hub, mediating the transmission of signals from cell surface receptors to downstream effector pathways.

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4 protocols using traf3

1

Molecular Mechanisms of Osteoclast Differentiation

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Cyclophosphamide (CPD) was purchased from Shengdi Company (Jiangsu, China). M-CSF and RANKL were purchased from Peprotech (New Jersey, USA). Primary antibodies against active β-catenin, Runx2, Cyclin D1, c-Myc, IκBα, phospho-IκBα, JNK, phospho-JNK, p38 and phospho-p38 were purchased from Cell Signaling Technology (Beverly, MA, USA) and others against TRAF-6, TRAF-3, NFATc1, RANK and c-Fos were purchased from Santa Cruz Biotechnology (CA, USA). The antibodies against β-catenin, phospho-Gsk-3β, and DKK1 were purchased from Abcam Company (Cambridge, UK).
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2

Immunoprecipitation of TRAF3 and GSK3β

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Cells were lysed in Immunoprecipitation (IP) lysis buffer (40 mM Tris pH 7.5, 0.5% Triton-X-100, 100 mM NaCl, 1 mM MgCl2, 1 mM CaCl2, 2 mM Na3VO4, and EDTA-free cOmplete mini protease inhibitor cocktail (Roche, Basel, Switzerland)) on ice for 30 min. Lysates were pre-cleared for 10 min with protein G Dynabeads (Invitrogen). Antibody (Ab) recognizing one of the following was added: TRAF3 (Santa Cruz Biotechnology (Dallas, TX, USA) #sc-1828, 1:1000, or Cell Signaling Technologies (CST, Danvers, MA, USA) Ab #4729, 1:100) or GSK3β (CST, #12456). Lysates were incubated with IP Ab for 2 h at 4 °C, then Ab-bound targets were captured with protein G Dynabeads for 20 min at 4 °C. Dynabeads were washed 3X with IP washing buffer (20 mM Tris pH 7.5, 1% Triton-X-100, 40 mM NaCl) then resuspended in IP lysis buffer for Western blotting analysis.
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3

Western Blot Analysis of Cell Signaling Proteins

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After caerulein treatment, total protein samples were extracted from cells and separated by SDS-polyacrylamide gel electrophoresis. Next, the proteins were transferred onto a polyvinylidene difluoride membrane (Millipore, Bedford, MA, USA). After blocking with 5% non-fat milk, the membrane was incubated with primary antibodies against TRAF3 (anti-rabbit, 1:500; Santa Cruz, Dallas, TX, USA), Bcl-2 (anti-rabbit, 1:500), C-caspase 3 (anti-rabbit, 1:500), Bax (anti-rabbit, 1:500), p-p38 (anti-rabbit, 1:500), p38 (anti-rabbit, 1:500), and GAPDH (anti-mouse, 1:1,000; Santa Cruz) at 4°C overnight. After washing with TBST, the membrane was incubated with a horseradish peroxidase-conjugated secondary antibody (1:1,000 dilution; Santa Cruz Biotechnology Inc.) for 1 h at room temperature. The blots were measured using a Pierce ECL Plus Substrate (Thermo Scientific, USA) according to the manufacturer’s instructions.
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4

Western Blot Analysis of Immune Regulators

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Western blot analysis was performed using standard procedures. Antibodies against MAVS (1:1000, Santa Cruz), IRF3, pho-IRF3 (1:1000, Abcam), NLRC3, NLRX1 (1:2000, Ting Lab (17 (link))), TRAF3 (1:200, Santa Cruz), TRAF6, Stat1 (1:500, Santa Cruz), PCBP2 and ARCH5 (1:500, Abcam), gC1qR (1:1000, Santa Cruz), β-actin (1:200,000, Abcam) were used.
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