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6 protocols using golph3

1

Multiparameter Immunofluorescence Analysis of Cells and Tissues

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A2780s and 293T cells were fixed in 4% paraformaldehyde for 30 minutes at room temperature. Murine ID8 tumor tissues were fixed in 4% paraformaldehyde for 24 hours at room temperature and were dehydrated in 30% sucrose for over 48 hours. The prepared tissues were store at -80°C for frozen sections. The tissues embedded in OCT at -25°C. 8.0 mm sections were air dried for 30 min. Sections and cells were permeabilized for 15 minutes in PBS with 0.5% Tritonx-100 and washed in PBST (PBS with 0.1% Tween 20). Blocking was carried out in 5% goat serum for 30 minutes at room temperature. Primary antibodies including: P230 (Biolegend, 611280, 1:100), Golph3 (Abcam, ab91492, 1:100), PPIP5K2 (Abcam, ab204374, 1:100), C5aR (Proteintech, 21316-1-AP), Ly-6G/Ly-6C (Gr-1) (Biolegend, 108401,1:100), CD45 (Biolegend, 103132, 1:100), CD11c (BD, 553801, 1:100), F4/80 (Biolegend, 123116, 1:100), SMA (ZSGB-BIO, zm-0003, 1:100) incubated overnight at 4°C. Primary antibodies were detected using the appropriate Alexa Fluor-labeled secondary antibodies (Invitrogen, 1:500). Slides were washed and incubated for 5 min with DAPI. Images were taken with an LSM710 Confocal Laser Scanning Microscope (Zeiss). Image analysis was performed using ImageJ software.
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2

Western Blot Analysis of GOLPH3 and GSK-3β Signaling

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Each cell line in logarithmic growth phase was washed with PBS. The cells were lysed in RIPA lysis buffer (containing 50 mM Tris-HCl, pH 7.4, 150 mM NaCl, 0.1% SDS, 1 mM EDTA, 1% Triton X-100, 1 mM PMSF, and 1 mM Protease Inhibitor Cocktail) for 20 min on ice with occasional vortex mixing. Protein concentrations were determined using the BCA assay kit (wegenebio, China). Protein concentrates of cell lysates (30 μg per lane) were separated by 10% SDS-PAGE and transferred electrophoretically to nitrocellulose membranes (solarbio, China). Membranes were blocked with 5% skimmed milk in TBST for 1 h at room temperature. The blots were incubated with antibodies against GOLPH3 (Abcam, Cambridge, UK); pS9-GSK-3β (Cell Signaling Technology, Danvers, MA, USA); GSK-3β (Santa Cruz Biotechnology, Santa Cruz, CA, USA); β-catenin (Santa Cruz Biotechnology); β-actin (Santa Cruz Biotechnology) at 4°C overnight. After being washed three times with PBST for 10 min, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology) for 1 h at room temperature. The bands were visualized with a chemiluminescence detection kit (ECL, Rockford, IL, USA) and the result was analyzed by Image J Software. Relative intensity target protein = target band of gray value/β-actin band gradation value. β-actin was used as a loading control.
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3

Western Blot Analysis of EMT Markers

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The western blot procedure was performed as described previously 27. Briefly, treated cells were lysed in RIPA lysis buffer containing protease inhibitor (1:1000). Approximately 30 μg of the protein samples was separated by 7.5–12.5% SDS‐PAGE gels and then transferred to PVDF membranes (Millipore, Bedford, MA). After being blocked in 5% skim milk at room temperature for 1 h, the membranes were incubated with the corresponding specific primary antibodies (1:1000 dilution) overnight at 4°C. Then, the bands were robed with the appropriate secondary antibody (1:5000 dilution; Proteintech, Chicago, IL) at room temperature for 1 h. Enhanced chemiluminescence reagents ((Pierce, Rockford, IL) were used to detect antibody complexes. The primary antibodies used in our study included GOLPH3, EDD (Abcam, Cambridge, UK), cyclin‐D1, c‐Myc (Proteintech, Chicago, IL), E‐cadherin, N‐cadherin, Snail, and β‐catenin (Cell Signaling Technology, Danvers, MA). To determine the effect of Wnt/β‐catenin signaling, the pathway agonist LiCl (20 mmol/L; Sigma, St. Louis) and antagonist XAV939 (10 μmol/L; Sigma) were used to treat cells for 24 h after transfection. β‐actin (Proteintech, Chicago, IL) was used as a loading control. Each experiment was performed in triplicate.
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4

Western Blot Analysis of Protein Levels

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Cells were lysed by lysis buffer, and BCA Protein Assay Kit (Thermo Fisher Scientific) was used to measure protein concentrations. Equal amounts of proteins were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS–PAGE), transferred to polyvinylidene difluoride (PVDF) membrane, blocked with 3% bovine serum albumin (BSA), and incubated with specific antibodies against GOLPH3 (1: 1000, Abcam, UK), cleaved caspase 3 (1: 200, Santa Cruz, USA), β-actin (1: 3000, ZhongShan, China), and NDRG1 (1: 1000, Abcam, UK) at 4°C overnight. The blots were developed after incubation with peroxidase-conjugated secondary antibodies (1: 4000) at room temperature for 1 h and then were imaged with a chemiluminescence detection kit (Pierce, USA). The densitometry value of blots was normalized by the internal loading control to determine relative protein levels.
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5

Immunofluorescence Staining of Mouse Cellular Markers

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We used the following mouse monoclonal antibodies: clone AC-74 to β-actin (Sigma-Aldrich), clone 35/GM130 to GM130 (BD Biosciences), clone 464.6 to Sodium Potassium-ATPase α 1 subunit (Abcam), and Horseradish Peroxidase-conjugated IgG to green fluorescent protein (Miltenyi Biotec; cat # 130-091-833). We used polyclonal antibodies to the following proteins: β-COP (Affinity Bioreagents; cat # PA1-061), GOLPH3 (Abcam; cat # ab98023), Syntaxin 16 (Synaptic Systems; cat # 110162), TGN38 (AbD Serotec; cat # AHP499G) and TGN46 (AbD Serotec; cat # AHP500G). The following fluorochrome-conjugated antibodies were from Life Technologies: Alexa Fluor-488–conjugated donkey anti mouse IgG, Alexa Fluor-594–conjugated donkey anti rabbit IgG, Alexa Fluor-647-conjugated donkey anti sheep IgG, and Alexa Fluor-647-conjugated donkey anti mouse IgG. HRP-conjugated secondary antibodies were from Jackson ImmunoResearch. Depending on their reactivity, primary antibodies were used at a dilution 1/200 to 1/2000. HRP-conjugated secondary antibodies were used at dilutions 1/1000 to 1/20000, depending on their reactivity. All Alexa Fluor-conjugated secondary antibodies were used at a dilution 1/1000.
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6

Immunohistochemical Analysis of mTOR Pathway

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IHC analysis on 4 μm paraffin-embedded specimens sections was performed by using Ventana Benchmark autostainer (Roche Diagnostics, Indianapolis, IN, USA), according to the best protocol for each antibody tested in our laboratory. The primary antibody for mTOR (catalogue number 2983), phospho-mTOR (Ser2448) (catalogue number 5536), AKT (catalogue number 4691), phospho-AKT (Ser473) (catalogue number 4060), S6 K1 (catalogue number 2708), phospho-S6 K1 (Thr389) (catalogue number 9234) were purchased from Cell Signaling Technology (CST) (Boston, MA, USA), GOLPH3 (catalogue number ab98023) was purchased from Abcam (Cambridge, MA, USA). Slides were viewed and photographed under a light microscope, and analyzed by using Image-Pro Plus software (version 6.2) program (Media Cybernetics). The intensity of staining was graded as follows: 0 (no staining), 1 (weak staining, light yellow), 2 (moderate staining, yellow brown) and 3 (strong staining, brown). The proportion of positive tumor cells were scored according to the following standards: 1 (< 10%), 2 (10–35%), 3 (35–70%) and 4 (> 70%). The staining index was determined by multiplying the intensity score by the proportion score. A staining index score of ≥6 was designated as tumors with high GOLPH3 expression, whereas a score of ≤4 was designated as low GOLPH3 expression.
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