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2 protocols using cbr 5884

1

Cell Culture Conditions for Cancer Cell Lines

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All cell lines used in this study (MDA MB 231, MDA MB 468, HCC 1443, T47-D, MCF7, LnCap, PC3, and DU145) were kept in a humidified cell culture incubator at 37 °C with 5% CO2. Cells were also culture in Dulbecco’s Modified Eagle Medium (DMEM)-GlutaMAX™ (Gibco, Germany), supplemented with 10% FCS (v/v) (Gibco, Germany), 1% penicillin/streptomycin (v/v) (Gibco, Germany). MDA MB 468, HCC 1443, and T47-D are kind gifts from Dr. Stefan Wiemann (DKFZ, Heidelberg). Indicated drugs were added to the standard culture medium for the indicated time points. PKM2 allosteric activators DASA-58 and TEPP-46 (Cayman Chemical-Biomol GmbH, Germany), dehydroepiandrosterone (DHEA), CBR-5884, AZD-3965, metformin, and sodium oxamate (Cayman Chemical-Biomol GmbH, Germany) 2-deoxyglucose (Fluka-Sigma-Aldrich, Germany) Rotenon, carbonyl cyanide 3-chlorophenylhydrazone (CCCP), tamoxifen, oligomycin, and sodium dichloroacetate (Sigma Aldrich, Germany).
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2

Macrophage Polarization and Tumor Co-culture

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Bone marrow cells were differentiated in the presence of recombinant mouse M-CSF (20 ng/ml; PeproTech) in complete medium (RPMI 1640 containing 10 mM glucose, 2 mM L-glutamine, 100 U/mL of penicillin/streptomycin and 10% FBS) for 7 days. Fresh complete medium with M-CSF was supplemented on day 6 prior to use. Day 7 macrophages were washed and variously stimulated with IL-4 (20 ng/ml; PeproTech) or LPS (20 ng/ml; Sigma-Aldrich) plus IFNγ (50 ng/ml; PeproTech) in the absence or presence of 5 μM GSK2656157 (Cayman Chemical), 30 μM CBR-5884 (Cayman Chemical), or 5 μM ISRIB (Cayman Chemical). Macrophages were harvested after 24 h and analyzed by flow cytometry for the expression of M2 or M1 activation. For tumor co-culture experiments, macrophages and tumor cells were collected on day 7. Tumor cells were plated at a density of 5-6 x 105 in a 12-well plate for at least 1 h prior to addition of macrophages. Once tumor cells were attached, 2 x 105 macrophages were added to each well for 72 h. For some experiments, macrophages were cultured with IL-4 in the presence of absence of 1 mM dimethyl-α-KG (dm-KG; Sigma-Aldrich) or 25 μM GSK-J4 (Selleck Chem) for 6 h, and cells were harvested for the further experiments as indicated.
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