The largest database of trusted experimental protocols

22 protocols using p egfr

1

rTMS Modulates Molecular Pathways in Neuronal Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Repetitive transcranial magnetic stimulation was purchased from Yingzhi Company (M-100 Ultimate). All reagents are listed as follows: phosphorylated-AKT (p-AKT) (4060, Cell Signaling), AKT (4691, Cell Signaling), phosphorylated extracellular signal-regulated kinase (p-ERK) (50011, Abcam), ERK (184699, Abcam), phosphorylated epidermal growth factor receptor (p-EGFR) (40815, Abcam), EGFR (52894, Abcam), NMDA receptor (NMDAR1) (17345, Abcam), p62 (56416, Abcam), LC3 (192890, Abcam), phosphorylated mammalian target of rapamycin (p-mTOR) (5536, Cell Signaling), mTOR (2983, Cell Signaling), phosphorylated protein kinase A (p-PKA) (32390, Abcam), PKA (75993, Abcam), Oct4 (2750, Cell Signaling), Nanog (8822, Cell Signaling), Sox2 (3579, Cell Signaling), GAPDH (8245, Abcam), dizocilpine maleate (MK801) (15084, MCE), 1,4-diamino-2,3-dicyano-1,4-bis(o-aminophenylmercapto)butadiene (U0126) (1901, Beyotime), 3-benzyl-5-((2-nitrophenoxy)methyl)-dihydrofuran-2(3H)-one (3BDO) (8317, Selleck), Fluo-4/AM (1060, Beyotime), horseradish peroxidase (HRP)-mouse (931, Sigma), HRP-rabbit (934, Sigma), Alexa Fluor 488 (150077, Abcam), Alexa Fluor Cy3 (97035, Abcam), and Cell Counting Kit-8 (CCK-8) (0037, Beyotime).
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Cancer Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemical staining for Ki-67 (Cat # sc-7907, Santa Cruz Biotechnology, Santa Cruz, CA), PCNA (sc-15402; Santa Cruz Biotechnology, Santa Cruz, CA), α-amylase (Cat # 3796, Cell Signaling Technology (Beverly, MA) and p-EGFR (Cat # ab40815; Abcam, Cambridge, UK) was performed on human PC xenograft tissue samples or mouse pancreatic samples, as previously described (27 (link)).
+ Open protocol
+ Expand
3

EGF-stimulated EGFR phosphorylation in pancreatic cancer cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Panc-1 cells, seeded in chamber slide dishes, were pre-incubated for 60 min in the presence of PA 1×IC50, erlotinib 40 nM or equivalent volumes of DMSO. Following stimulation with EGF 10 ng/ml for 15 minutes, Panc-1 cells were fixed with paraformaldehyde (4% w/v in PBS). In a second experiment, Panc-1 cells, MIA PaCa-2 cells and AsPC-1 cells were treated with PA 1×IC50 for 4h. Immunostaining was performed for p-EGFR (Cat # ab40815; Abcam, Cambridge, UK). After PBS washing, sections were incubated with an Alexa Fluor 488-linked secondary antibody. After staining, slides were mounted in VECTASHIELD with DAPI and photographed under a Nikon ECLIPSF 90i microscope with a digital camera.
+ Open protocol
+ Expand
4

Comprehensive Western Blot Analysis of EGFR Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
For Western blot analysis, cells were lysed with RIP buffer (Boster) supplemented with RNase inhibitor and phosphatase inhibitor after cell transfection. Protein concentration was identified using a BCA kit (Invitrogen). The lysate sample was separated on a 10% SDS-PAGE gel and blotted onto blotted onto PVDF membranes. The membrane was incubated with primary antibody overnight at 4 °C, including EGFR (1:2000, Abcam), P-EGFR (1:2000, Abcam), KRAS (1:2000, Abcam), BRAF (1:2000, Abcam), MEK1/2 (1:2000, Abcam), P-MEK1/2 (1:1000, Proteintech), ERK (1:2000, Abcam), P-ERK (1:2000, Abcam), MAP3K1 (1:700, Proteintech), P-MAP3K1 (1:1000, Proteintech), β-actin (1:700, Proteintech), incubate for 2 hours at room temperature with anti-rabbit secondary antibody. Finally, protein band detection was performed using a Chemiluminescent Reagent (ECL) kit (Beyotime Biotechnology).
+ Open protocol
+ Expand
5

Protein Expression Analysis in Cardiomyocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cardiomyocytes and cardiac fibroblasts were collected and lysed to extract the proteins. The membrane proteins were extracted with a cell membrane protein extraction kit (Biyuntian Institute of Biotechnology, Shanghai, China) following the manufacturer's instructions. The protein concentration was detected using a BCA assay. The proteins were resolved by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. Then, the PVDF membranes were blocked with 5% skim milk for 1 h and incubated with antibodies against MR (1 : 60, Abcam), EGFR (1 : 1200, Abcam), pEGFR (1 : 800, Abcam), ERK1/2 (1 : 1000, Abcam), pERK1/2 (1 : 600, Cell Signaling Technology, Inc., USA), Na-K ATPase (1 : 1000, Abcam), and β-actin (1 : 1000, Abcam) overnight at 4°C. After the membranes were washed with TBST, they were incubated with secondary antibodies for 4 h at room temperature. Finally, immunoreactivity was visualized with an ECL kit (Millipore, MA, USA). The relative expression levels (ratio compared to Na-K ATPase or β-actin expression) of the target proteins were quantified by ImageJ software.
+ Open protocol
+ Expand
6

Immunohistochemical Analysis of Tumor Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
After fixation, the tumor tissues were embedded in paraffin wax, and tissue sections were cut at 5μm using a Thermo Scientific™ HM 355S Automatic Microtome (Thermo Fisher Scientific, USA). The sections were deparaffinized using xylene, rehydrated, and microwaved for antigen retrieval. After cooling, the tumor sections were exposed to a peroxidase blocking solution. The sections were stained with hematoxylin and mounted in resin, and examined by light microscopy to identify the tumor cells. The sections were incubated with antibodies for expression of p-HER2 (InvivoGen, USA) and p-EGFR (Abcam, Cambridge, UK).
+ Open protocol
+ Expand
7

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA buffer containing protease and phosphatase inhibitors. Lysates were centrifuged at 14,000 rpm for 15 min, and the supernatant was collected. Subsequently, the proteins were separated via sodium dodecyl sulfate (SDS)–polyacrylamide gel electrophoresis. Immunoblotting was performed using antibodies against LGALS3BP (R&D systems), p-EGFR (cell signaling), EGFR (cell signaling), CA19-9 (Abcam), and β-actin (Santa Cruz Biotechnology).
+ Open protocol
+ Expand
8

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells on SISmuc or in Petri dishes were washed twice with ice-cold PBS and lysed (30 min, 4 °C) on a rocking platform with modified RIPA buffer containing 137 mM NaCl, 50 mM NaF, 20 mM Tris (pH 8), 2 mM EDTA, 10% (v/v) glycerol, 1.0% (v/v) NP40, 0.5% (w/v) sodium deoxycholate, 0.1% (w/v) SDS, and freshly added 1 mM Na3VO4 and protease inhibitor cocktail tablets (cOmplete™ mini EDTA-free, Roche, Basel, Switzerland). The lysate was centrifuged (14,000 rpm, 10 min, 4 °C) and the supernatant transferred into clean tubes for quantitation of the protein concentration using DC Protein Assay (500-0116, BioRad, Hercules, CA, USA) or stored (−80 °C) until further use. Before SDS gel electrophoresis, a protein precipitation with methanol/chloroform according to Wessel and Flügge [68 (link)], was performed. Antibodies used for WB: EGFR (4267, CST), p-EGFR (Tyr1068, Y68) (32430, Abcam), Met (8198, CST), p-Met (Tyr1234/1235) (3077, CST, Danvers, MA, USA), Erk1/2 (05-1152, Millipore, Burlington, MA, USA), p-Erk1/2 (Thr202/Tyr204) (4370, CST), Akt (pan) (4691, CST), p-Akt (Ser473) (4060, CST), α-Tubulin (3873, CST). We used the Protein Ladder_ProSieve QuadColor Protein Marker (Lonza, Basel, Switzerland).
+ Open protocol
+ Expand
9

Examining Anticancer Mechanisms of Capsaicin and Sorafenib

Check if the same lab product or an alternative is used in the 5 most similar protocols
Capsaicin and sorafenib were purchased from Sigma-Aldrich; Merck KGaA (St. Louis, MO, USA) and Selleckchem (Houston, TX, USA), respectively. Antibodies against GAPDH, Bax, cleaved caspase-3 (Asp175), poly(ADP-ribose) polymerase (PARP), beclin-1, LC3A/B, E-cadherin, vimentin, P-Akt (Ser473), Akt, P-mTOR (Ser2448), mTOR, P-p70S6 kinase (P-p70S6K, Thr389), p70S6K and Ki-67 were obtained from Cell Signaling Technology (Danvers, MA, USA). The P62 antibody was obtained from Proteintech (Rosemont, IL, USA). The antibodies against Bcl-2, N-cadherin, matrix metalloproteinase (MMP)2, MMP9, P-EGFR, EGFR and PI3K p85α were obtained from Abcam (Cambridge, MA, USA). The details on the antibodies used in the present study are listed in Table I.
+ Open protocol
+ Expand
10

EGFR Signaling Pathway Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
A431 ctr or KO cells were lysed on ice in NP-40 lysis buffer (100 mM NaCl 100 mM Tris pH8, 1% NP-40) for 15 min. Pellets were discarded after spinning at max speed for 15 min at 4 °C and supernatant was separated in SDS-PAGE and transferred onto nitrocellulose membrane. After blocking with 5% skimmed milk (Marvel, Camlab, Cambridge, UK) in TBS (Santa Cruz)/0.1% Tween20 (Sigma) for 30 min at RT, the membranes were incubated with primary antibodies in 5% skimmed milk/TBS-T. The following primary antibodies were used for western blotting: EGFR (Cell Signaling), pEGFR (Abcam), Actin (Millipore).The blots were washed three times with TBS-T and then incubated with corresponding IRDye secondary antibodies 680RD or 800CW (Li-Cor, Cambridge, UK, 0.05 µg/ml). After three times washing with TBS-T protein signals were visualized using the ODYSSEY Sa infrared system (Li-Cor) and Image Studio software 2.0 (Li-Cor). Full scans of Western blots are shown in Supplementary Figure 5.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!