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17 protocols using immobilon psq transfer pvdf membrane

1

Signaling Pathways in Colorectal Cancer

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To test the signaling pathways involved in the anti-proliferative effects of NDAT, gefitinib, and their combination, we applied western blot to quantify the protein expression levels in the total cell lysates of the primary cultures of human CRC cells (Colo_160224 cells); the cells were treated with NDAT, gefitinib, or in combination for 24 h. Protein samples were resolved by 10% sodium dodecyl sulfate-polyacrylamide gel. The resolved proteins were transferred to Millipore Immobilon-PSQ Transfer PVDF membranes (Millipore, Billerica, MA, USA) by the Mini Trans-Blot Cell (Bio-Rad Laboratories, Inc.). The membranes were blocked with 5% skim milk in TBST, and incubated with primary antibodies against PD-L1 and GAPDH (GeneTex International Corp., Hsinchu City, Taiwan) at 4 °C overnight. HRP-conjugated secondary antibodies and the Immobilon TM Western Chemiluminescent HRP Substrate (WBKLS0500, Millipore, Billerica, MA, USA) were used to detect the target antigen. Western blots were visualized and recorded with the BioSpectrum Imaging System (UVP, LLC, Upland, CA, USA). The densitometric analyses of western blots were analyzed with the ImageJ 1.5 software (NIH, Bethesda, MD, USA).
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2

Metformin Effects on Histone Modifications

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Nematodes were synchronized and treated for 1 day with or without 50‐mM metformin starting at L1/L2 or L4 larvae stage. After worms were homogenized in liquid nitrogen, the homogenate was lysed on ice for 60 min in lysis buffer (BioTeKe). Total proteins were loaded (40 μg per well) and separated on a 10% SDS polyacrylamide gel. Proteins were then transferred to Immobilon‐PSQ transfer PVDF membranes (Millipore, Bedford, MA). Primary antibodies against H3K4me3 (1:1,000 dilution; Abcam, ab8580), H3K9me3 (1:1,000 dilution; Abcam, ab8898), H3K27me3 (1:1,000 dilution; Abcam, ab272165), H3K36me3 (1:1,000 dilution; Abcam, ab9050), H3(1:2,000 dilution; Abcam, ab1791), p‐AMPKa (1:1,000 dilution, CST, 2535), p‐S6K (1:1,000 dilution, CST, 9205), S6K(1:1,000 dilution, CST, 2708), p‐mTOR (1:1,000 dilution, CST, 2971), mTOR (1:1,000 dilution, CST, 2972), and beta‐actin (1:1,000 dilution; Abcam, ab227387) used. The secondary antibody was a peroxidase‐coupled anti‐rabbit IgG (1:20,000 dilution; Abmart). The blots were developed using SuperSignal chemiluminescence substrate (Pierce). Band intensities were measured using ImageJ software.
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3

Western Blotting Analysis Protocol

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Western blotting analyses were conducted followed routine protocol described previously (6 (link), 7 (link), 19 (link)–21 (link), 23 (link)). Consistent amount of protein samples were resolved on a 10% sodium dodecyl sulfate polyacrylamide gel (SDS-PAGE). A 20 μg quantity of protein was loaded in each well with 5x sample buffer, and the protein samples were resolved with electrophoresis at 100 V for 2 h. The resolved proteins were transferred from the polyacrylamide gel to Millipore Immobilon-PSQ Transfer PVDF membranes (Millipore, Billerica, MA, USA) with the Mini Trans-Blot® Cell (Bio-Rad Laboratories). The membranes were blocked with a solution of 2% FBS in Tris-buffered saline and incubated with primary antibodies to pERK1/2 (GeneTex, Inc., Hsinchu, Taiwan), Cyclin D1 (Santa Cruz Biotechnology, Inc., Dallas, TX, USA), ERK1/2 (Santa Cruz Biotechnology), and α-Tubulin (Novus Biologicals, Littleton, CO, USA) at 4°C overnight and washed; the proteins were detected with HRP-conjugated secondary antibodies and Immobilon™ Western HRP Substrate Luminol Reagent (Millipore). Images of the western blots were visualized and recorded with an Amersham Imager 600 (GE Healthcare, Chicago, IL, USA). The blots were quantified using ImageJ software (National Institutes of Health, Bethesda, MD, USA).
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4

Quantitative Western Blot Analysis

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The samples of lung tissues of rats were homogenized in liquid nitrogen and the homogenate was lysed into lysis buffer on ice for 30 min (Beyotime, Jiangsu, China). For detection of protein expression in Beas-2B cells, the cells were was lysed into lysis buffer on ice for 30 min. Total protein lysates were estimated using the BCA protein assay (Beyotime, Jiangsu, China). The lysates (40 μg) of total protein per well were separated using 10% SDS polyacrylamide gel, and then transferred onto immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). Membranes were detected of phosphorylated forms and expression of protein. Primary antibodies were anti-phospho-Smad2, anti-TGF-β1, anti-α-SMA (1: 1000 dilution; Santa Cruz Biotechnology, Santa Cruz, CA), anti-Collagen I (1:3000 dilution; Abcam) and anti-Actin antibodies (1:3000 dilution; Sigma). The secondary antibody was a peroxidase-coupled anti-mouse or rabbit IgG (1:4000 dilution; Abmart). The membrane was exposed to Kodak X-OMAT film (Kodak, China), and the film was developed. Signals were quantified using Image J and normalized to controls.
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5

Usnic Acid Impacts Protein Regulation

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Nematodes were synchronized and treated for 1 day with or without 2 μM Usnic Acid starting at L4 larvae stage. After the worms were homogenized in liquid nitrogen, they were ice cleaved in pyrolysis buffer (BioTeKe) for 60 min. The total protein were loaded (40 μg per well) and separated on a 10% SDS polyacrylamide gel. Then, proteins were transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). Primary antibodies against p-S6K (1:1,000 dilution, CST, 9205), S6K(1:1,000 dilution, CST, 2708), GFP (1:1,000 dilution, CST, 2956), and beta-actin (1:1,000 dilution; Abcam, ab227387) used. The secondary antibody was a peroxidase-coupled anti-rabbit IgG (1:20000 dilution; Abmart). Supersignal chemiluminescence substrate (Pierce) was used for imprinting. ImageJ software was used to measure band intensity.
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6

Sanguinarine Modulates Phosphorylated PMK-1 in Nematodes

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Nematodes were synchronized and treated for 1 day with or without 0.2 μM sanguinarine starting at L4 larvae stage. After worms were homogenized in liquid nitrogen, the homogenate was lysed on ice for 60 minutes in lysis buffer (BioTeKe). The lysates of total protein were loaded (40μg per well) and separated on a 10% SDS polyacrylamide gel. Proteins were then transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). Phosphorylated PMK-1 protein was detected using an anti-active p38 polyclonal antibody from rabbit (1:1000 dilution; Abcam, ab4822), anti-p38 antibody from rabbit (1:1000 dilution; Abcam, ab170099) and anti-beta actin antibody (1:1000 dilution; Abcam, ab227387). The secondary antibody was a peroxidase-coupled anti-rabbit IgG (1:20000 dilution; Abmart). Blots were developed using Super Signal chemiluminescence substrate (Pierce). Band intensities were measured using Image J software.
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7

Western Blot Analysis of SERCA2 in Worms

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After worms were homogenized in liquid nitrogen, the homogenate was lysed on ice for 30 min in lysis buffer (BioTeKe, Beijing, China). The proteins of lysates (50 µg per well) were separated on a 7% SDS-polyacrylamide gel. Proteins were then transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). Primary antibodies were anti-ATP2A2/SERCA2 antibodies (1∶1000 dilution; Cell Signaling, Beverly, MA), and anti-actin antibodies (1∶1000 dilution; Santa Cruz Biotech., Santa Cruz, CA). The secondary antibody was a peroxidase-coupled anti-rabbit IgG (1∶8000 dilution; Santa Cruz Biotech.). The membrane was exposed to Kodak X-OMAT film (Kodak, Xiamen, China), and the film was developed.
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8

Western Blot Analysis of GFP Expression in Worm Samples

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After treatment, worms were homogenized in liquid nitrogen. The homogenate was lysed on ice for 60 min in RIPA buffer (Beyotime Institute of Biotechnology, Haimen, China). Fifty micrograms of total protein lysates were loaded per well and separated on a 10% SDS polyacrylamide gel. Proteins were then transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). The primary antibodies were anti-GFP (#M20004, mouse mAb, 1:1000 dilution; Abmart Inc., Shanghai, China) and anti-actin antibodies (#ab14128, mouse mAb, 1:1000 dilution; Abcam, Cambridge, MA). The secondary antibodies were HRP-conjugated anti-mouse IgG (#HS201-01, 1:5000 dilution; Beijing TransGen Biotech Co., China). An imaging system (Amersham Imager 600) was used for documentation of the western blotting results. Protein intensity was analyzed using ImageJ (NIH). Uncropped scans of all western blots are placed in the Supplementary Fig. 14.
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9

Quantifying Phosphorylated PMK-1 in Worms

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After worms and lung tissues were homogenized in liquid nitrogen, the homogenate was lysed on ice for 60 min in lysis buffer (BioTeKe). The lysates of total protein were loaded (40 μg per well) and separated on a 10% SDS polyacrylamide gel. Proteins were then transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA). Phosphorylated PMK-1 protein was detected using an anti-active p38 polyclonal antibody from rabbit (1:1000 dilution; Abcam, ab4822), and anti-beta-actin antibodies (1:1000 dilution; Abcam, ab227387). The secondary antibody was a peroxidase-coupled anti-rabbit IgG (1:20,000 dilution; Abmart). Blots were developed using the Super Signal chemiluminescence substrate (Pierce). Band intensities were measured using ImageJ software.
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10

Protein Extraction and Western Blot Analysis

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After washed with M9 buffer, worms were homogenized in liquid nitrogen. Then the homogenate was lysed on ice for 30 min in lysis buffer RIPA (Beyotime Institute of Biotechnology, Haimen, China). After centrifuged at 12,000 rpm for 15 min at 4 °C, the supernatant was obtained and used for Western blot analysis. The total protein extraction was loaded on 10% SDS-PAGE for electrophoresis. Proteins were then transferred to immobilon-PSQ transfer PVDF membrane (Millipore, Bedford, MA, USA). Primary antibodies were anti-phospho-p38 antibodies (1:1000 dilution; Promega Biotech Co.,Ltd, Beijing, China), and anti-α-tubulin antibodies (1:1000 dilution; Abcam, Cambridge, UK). The secondary antibodies were peroxidase-coupled anti-rabbit IgG (1:10,000 dilution; Abmart, Shanghai, China). Blots were developed using Super Signal chemiluminescence substrate (Thermo Fisher Scientific, Waltham, MA). An imaging system (Amersham Imager 600) was used for documentation of the Western blot results. Band intensities were measured using ImageJ software (NIH).
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