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6 protocols using d110087

1

Western Blot Protein Analysis Protocol

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Bacterial samples were resuspended in 1× protein loading buffer and boiled at 98 °C for 8 min. 0.05 OD of proteins samples were loaded each lane. Proteins were transferred onto PVDF membranes (#10600023, Cytiva) for 45 min at 150 V in transfer buffer. Membranes were blocked for 1 h at room temperature in 1× TBST buffer with 5% (w/v) skim milk (#A600669-0250, Sangon), washed with TBST twice and incubated with monoclonal α-FLAG (Sigma-Aldrich #F1804-5MG; 1:10,000), α-SipC (1: 3,000) or α-GroEL (Sigma-Aldrich #G6532; 1:10,000) antibodies for 1 h at room temperature. After three TBST washes, membranes were incubated with secondary α-mouse or α-rabbit HRP-linked antibodies (Sangon #D110087 or #D110058; 1:10,000) for 1 h at room temperature. Chemiluminescence was developed using the high sensitive ECL luminescence reagent (#C500044-0100, Sangon), and then visualized on ChemiScope 6000SE and quantified using ImageJ Software.
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2

Western Blot Analysis of Immune Checkpoint Proteins

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In brief, the protein samples were separated by SDS-PAGE using a 4% stacking gel and an 8 ~ 10% main gel and transferred to a polyvinylidene difluoride (PVDF) membrane. The membrane was blocked with 5% milk at room temperature for 1–2 h and then incubated with anti-SIRPα (dilution 1:1000, AB8120, Abcam), anti-PD-1 (dilution 1:200, ab52587, Abcam) or anti-Phosphotyrosine (dilution 1:1000, 05–321, Millipore) dissolved in primary antibody dilution buffer overnight at 4 °C. Then the membrane was washed and incubated with appropriate HRP-coupled goat anti-rabbit IgG (D110058, Sangon Biotech) and HRP-coupled goat anti-mouse IgG (D110087, Sangon Biotech) for 1–2 h at room temperature. Finally, the membranes were exposed using an enhanced chemiluminescence (ECL) detection kit (P1030, Applygen). Results were analyzed by ImageJ software (NIH, Bethesda, MD, United States).
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3

Immunohistochemical Analysis of MUC13 in Esophageal Cancer

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The paraffin sections of esophageal cancer and adjacent nontumor tissues (HEsoS160CS01, Shanghai Outdo Biotech Co., Ltd.) were deparaffinized with xylene and hydrated with absolute ethanol, 95% ethanol, 80% ethanol, 70% ethanol and distilled water, respectly. After 30 min microwave heat recovery by citric acid antigen retrieval method, the sections were cooled to room temperature and washed with PBS (0.01 M, pH 7.4), and then blocked with 2% BSA blocking solution at room temperature for 2 h. After blocking, the sections were incubated with the primary MUC13 (1: 50, Santa Cruz, USA) antibody for 2 h at 37 °C. Then rinsed three times in PBS, followed by incubation of the secondary antibody (D110087,Sangon Biotech Co., Ltd) at 37 °C for 2 h. DAB substrate kit was used to perform the chromogenic reaction. During which, slices were observed under the microscope to confirm the color end point. Then, the nucleus were counterstained with hematoxylin for 3 min. The slides were dehydrated in a series of graded ethanol solutions and transparented with xylene, and then mounted with a neutral gum. Finally, semiquantitative analysis of immunohistochemical results was conducted by Image ProPlus software, and positive cell percentages were calculated using IHC plug-in after color deconvulutionfor H&E DAB.
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4

Adenovirus-mediated A20 overexpression in chickens

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The overexpressed adenovirus primers were designed according to NCBI sequences for chicken A20 (XR_005848478). A20 was amplified using PCR and cloned into the vector pShuttle-IRES-hrGFP-2. Two shRNAs were designed using an online website (http://rnaidesigner.thermofisher.com/rnaiexpress/) and cloned into the vector pShuttle-H1 after annealing. The primer sequences are listed in Table 1. The recombinant adenoviruses were constructed according to manufacturer's instructions (26 (link)). The constructed A20 adenovirus was inoculated into 10-day-old chicken embryos (108 TCID50/egg). The liver and kidneys were harvested 20 days after infection and treated with NP-40 cell lysate (P0013F, Beyotime, China). It was analyzed using Western blotting as previously described (27 (link)). The antibodies and dilutions used for Western blotting were as follows: anti-ALV-A envelope glycoprotein-specific antibody (prepared in our laboratory, 1:1,000), rabbit Anti-A20 antibody (GB112182, Servicebio, China, 1:1,000), mouse anti-GAPDH monoclonal antibody (60004, Proteintech, USA, 1:5,000), HRP-conjugated goat anti-rabbit IgG (D110058, Sangon Biotech, China, 1:5,000), and HRP-conjugated goat anti-mouse IgG (D110087, Sangon Biotech, China, 1:5,000).
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5

Protein Expression Analysis of HGSMCs

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Proteins were extracted from tissues and HGSMCs with the Radio-Immunoprecipitation Assay Buffer (RAPI, Junxin Biotech). Western blot analysis was carried out as described previously (Yu et al., 2017 (link)). The antibodies used were as follows: anti-α-SMA (1:1000, Ab108424, Abcam, Cambridge, United Kingdom), anti-SM22α (1:1000, D123178, Sangon Biotech Co., Ltd, Shanghai, China), anti-MHC (1:1000, Ab23990, Abcam), anti-DLL1 (1:1000, Ab10554, Abcam), anti-β-Actin (1:4000, K200058M, Solarbio, Beijing, China), HRP-conjugated goat anti-rabbit IgG (1:4000, D110058, Sangon Biotech), and HRP-conjugated goat anti-mouse IgG (1:4000, D110087, Sangon Biotech). An enhanced chemiluminescence detection kit (Junxin Biotech) was used to observe the immunoreactivity, and the Gelpro analyzer software (Infaimon S.L., Barcelona, Spain) was used for data analysis.
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6

Western Blot Validation of iTRAQ Proteomics

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The WB was conducted on protein extracts of rat OB tissues that were also used for the iTRAQ experiment. Our previous study served as a prototype when carried out the procedures of electrophoresis, transfer and immunodetection [13, 30] . The primary antibodies used in our experiments were as follows: Lamc1 (1:2,000; 67706-1-Ig, Proteintech), Mtor (1:12,000; 66888-1-Ig, Proteintech), Homer3 (1:800; 16624-1-AP, Proteintech), Lum (1:800; D122637, Sangon), Tubal3 (1:1,000; D199287, Sangon), GAPDH (1:5,000; 60004-1-Ig, Proteintech) and β-tubulin (1:6,000; 10094-1-AP, Proteintech). Anti-mouse (1:10,000; D110087, Sangon) or anti-rabbit (1:10,000; D110058, Sangon) horseradish peroxidase-conjugated IgG was used as secondary antibody. After immunodetection, the intensities of the immunostained bands were normalized by the intensity of the GAPDH or β-tubulin band. The blot images were analyzed using Quantity One analysis software (Bio-Rad).
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