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1

Mapping T4 Driver Line Expression

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To visualize the expression pattern of the T4 driver line (SS02344),
brains of female flies were immunolabeled and imaged as described41 (link). anti-Brp was used as a stain
for the neuropil marker (anti-nc82 1:30, Developmental Studies Hybridoma Bank)
and pJFRC225-5XUAS-IVS-myr::smFLAG (rat anti-FLAG 1:100, Novus Biologicals) in
VK0000542 (link)was used as the reporter for GAL4 expression. For Supplementary Fig. 1a, the image
shown was generated from a confocal stack imaged on a Zeiss LSM 710 microscope
with a 63× objective, and resampled using Vaa3D43 (link).
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2

Confocal Microscopy Analysis of Protein Localization

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For confocal analyses, we dissected at least six to ten animals. For fixation larvae were opened at the dorsal midline and stretched out with four needles, fixed in PBS 4% PFA for 20 min at room temperature and then washed with three quick buffer exchanges and three 20 min long washing steps. Tissues were blocked for immunohistochemistry with 10% goat serum for 1 h as described43 (link). The following antibodies were used: Anti-V5 (1:500, Invitrogen, R96025); anti-Flag (1:1000; Novus biologicals, NBP1-06712); anti-HA (1:1000; Covance, MMS-101P 901503); anti-HRP-DyLightTM649 (1:500; Dianova, 123-165-021); anti-GFP (1:1000; Invitrogen, A6455); anti dsRed (1:1000, Clontech Labs 3P 632496), anti-Innexin2 (1:10067 (link)) anti-Futsch (1:5, mAb 22C1071 (link),72 (link)), conjugated secondary antibodies (all 1:1000, anti-mouse 488, A10680; anti-mouse 568, A11031; anti-rabbit 488, A11008; anti-rabbit 568, A11011; anti guinea pig 647, 1903515; anti-rat 647, A21247; all Invitrogen). All specimens were analyzed using a Zeiss 710 or 880 LSM; orthogonal sections were taken using the Zeiss LSM imaging software.
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3

Quantitative Western Blot Analysis

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The proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride (PVDF) membrane (Millipore). The protein-containing PVDF membranes were then probed with following primary antibodies: Anti- PKM1 (Cell Signaling Technology,7067S), Anti-PKM2 (Cell Signaling Technology, 4053S) to identify the level of PKM isoform, Anti- BORIS (Millipore ABE631), AntiDNMT3B (Abcam, ab13604), anti-flag (Novus Biologicals, NBP1-06712SS) and Anti GAPDH (Cell Signaling Technology, 5174S) were used as loading controls for protein assays. After 2 h incubation with primary antibody at room temperature (RT), membranes were washed with 1X tris-buffered saline and Tween-20 (TBST) then again incubated with secondary antibodies for 45 min at RT. The probed PVDF membranes were washed, and the bands were visualized using an Odyssey membrane Scanning system (Li-Cor Biosciences, Bad Homburg, Germany).
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