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6495b qqq mass spectrometer

Manufactured by Agilent Technologies

The Agilent 6495B QQQ mass spectrometer is a high-performance liquid chromatography-tandem mass spectrometry (LC-MS/MS) instrument. It is designed to provide precise, sensitive, and reliable quantitative analysis of a wide range of analytes in complex matrices.

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4 protocols using 6495b qqq mass spectrometer

1

UPLC-MRM/MS Analysis of Biological Samples

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UPLC-MRM/MS analysis was performed using a commercial service facility at Creative Proteomics.10 μL aliquots of the resultant solutions were injected into a C18 LC column (2.1 × 150 mm, 1.8 μm) to run UPLC-MRM/MS on an Agilent 1290 UHPLC system coupled to an Agilent 6495B QQQ mass spectrometer operated in the positive-ion mode, with the use of 0.1% for mica acid in water (A) and acetonitrile (B) for binary gradient elution (50% to 100% B in 15 min), at 0.35 mL/min and 55 °C. The resulting data are normalized to input cells and expressed in per cell basis.
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2

SCFA Concentration Measurement Protocol

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Measurement of SCFA concentration was performed by the UVic-Genome BC Proteomics Centre as previously described [36 (link)] with minor modifications. Briefly, a standard substance solution of SCFAs was serially diluted to have 10 working standard solutions. Sixty percent acetonitrile was added to each fecal and cecal sample, followed by homogenization and sonication. Serum samples were mixed with acetonitrile and sonicated in an ice-water bath. All samples were centrifuged, and the supernatants were used to run liquid chromatography-multiple reaction monitoring/mass spectrometry on an Agilent 1290 ultra-high-performance liquid chromatography system coupled to an Agilent 6495B QQQ mass spectrometer.
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3

Quantitative Analysis of Infant Fecal Monosaccharides

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The monosaccharides analyzed in this method are those that are unconjugated and not constituents of di-, oligo-, or polysaccharides. The separation of monosaccharides used a binary solvent system, solvent A contained 5% acetonitrile (ACN) and 25 mM ammonium acetate (NH4Ac) pH adjusted with ammonium hydroxide (NH4OH) to 8.2. Solvent B consisted of 95% ACN. A flow rate of 0.500 mL/min was used with the following gradient: 0–7 min, 12–15% B; 7–7.10 min, 15–99% B; 7.10–8.50 min, 99% B; 8.50–8.60 min, 99–12% B. Quantitation of monosaccharides in infant feces was conducted using a calibration curve constructed with a range from 1 µg to 100 mg monosaccharide per mg solution. The column used for separation was an Agilent ZORBAX RRHD ECLIPSE PLUS C18 column (150 × 2.1 mm) with 1.8 µm particle size. The UHPLC-QqQ system was an Agilent 1290 Infinity II UHPLC coupled to an Agilent 6495B QqQ mass spectrometer and 1 µL of each sample was injected for a run time of 10 min. Further details on instrument parameters and monosaccharide standards have been described by Xu et al. (26 ).
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4

Quantification of Individual Sterols by UPLC-MS

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Two hundred microliter of the supernatant of each sample was dried under a gentle nitrogen gas flow. The residue was resuspended in 100 μl of a 13C3-cholesterol internal standard solution. Along with the sample preparation, serially diluted standard solutions of sterols were prepared in the same internal standard solution. 100 μl of each sample solution or each standard solution was mixed with 100 μl of 20 mM dansyl chloride solution and 100 μl of 25-mM dimethylaminopyridine solution. The mixture was allowed to react at 50 °C for 60 min. After reaction, the solution was dried in a speed-vac concentrator, and the residue was reconstituted in 400 μl of acetonitrile. 10 μl aliquots were injected onto a C18 UPLC column (2.1 × 50 cm, 1.7 μm) to run UPLC-MRM/MS on an Agilent 1290 UHPLC system coupled to an Agilent 6495B QQQ mass spectrometer operated in the positive-ion mode, using 0.1% formic acid in water acetonitrile/isopropanol (1:1) as the LC mobile phase for binary-solvent gradient elution at 0.35 ml/min and at 60 °C. Concentrations of individual sterols were calculated with the analyte-to-internal standard peak area ratios measured from injections of sample solutions to interpolate the constructed linear regression calibration curves of individual sterols in appropriate concentration ranges.
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