The largest database of trusted experimental protocols

Collagen type 1

Manufactured by Roche
Sourced in China, Switzerland

Collagen type I is a naturally occurring structural protein found in various connective tissues, such as skin, bone, and tendon. It is a key component of the extracellular matrix and plays a crucial role in providing strength and support to these tissues. Collagen type I is widely used in research and laboratory applications to study cellular interactions, tissue engineering, and biomaterial development.

Automatically generated - may contain errors

7 protocols using collagen type 1

1

Embryonic Midbrain Tissue Explant Culture

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fertilised hen’s eggs were incubated at 38 °C until HH stage 11 or stage 13 [24 (link)]. Embryos were dissected and extra-embryonic tissue removed. For the pharmacological manipulation of signalling pathways, embryos were cut anterior to the midbrain/diencephalon border and posterior of the otic vesicle. For the midbrain tissue explant cultures, the midbrain region was first dissected and the isthmus or roof plate regions removed using fine tungsten needles. Explant pieces were embedded in type I collagen (Roche), dorsal side up and cultured overnight, at 37 °C in F12 medium (Sigma) supplemented with 10% fetal calf serum (Life Technologies) and penicillin/streptomycin (Sigma). All drugs were dissolved in DMSO to the following stock concentrations: dorsomorphin, 5 mM; SU5402, 34 mM; IWP-2; 1 mM. Stock solutions were stored at −20 °C. Drugs, or equal volume of DMSO (1-9ul /ml depending on the corresponding concertation of the drug) for the controls, were added to the culture medium. Explants were fixed in formaldehyde for subsequent immunostaining.
+ Open protocol
+ Expand
2

Cell Culture and Synchronization Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
HT1080 cells (ATCC, Manassas, Virginia) were cultured according to the manufacturer’s instructions in Dulbecco’s Modified Eagle’s medium (DMEM, GIBCO) supplemented with 10 % fetal bovine serum (FBS GIBCO). For cell encapsulation and cell cycle studies, HT1080 cells were synchronized under serum-free media for three days with daily media change. Human umbilical cord blood ECFCs were provided by Dr. Merv C. Yoder, Indiana University School of Medicine, and expanded and used for experiments between passages 6 and 9, as previously described [30 (link), 31 (link)]. ECFCs were cultured in flasks precoated with type I collagen (Roche Diagnostics, Basel, Switzerland), in endothelial growth medium (EGM, PromoCell, Heidelberg, Germany) supplemented with 1 ng/ml VEGF165 (Pierce, Rockford, IL). All cell cultures were incubated in a humidified incubator at 37 °C in an atmosphere containing 5 % CO2. Both HT1080 cells and ECFCs were passaged every four to five days with 0.05 % trypsin (Invitrogen, Carlsbad, CA), and media were changed every other day.
+ Open protocol
+ Expand
3

Platelet Adhesion Assay on Collagen and Fibrinogen

Check if the same lab product or an alternative is used in the 5 most similar protocols
The 96-well microtiter plates were coated (overnight at 4 °C) by adding 100 μL per well either with collagen type I (100 μg/mL; Roche Diagnostic S.p.a. Monza, Monza Brianza, Italy) or human fibrinogen (100 μg/mL; Merck Life Science S.r.l.). The non-specific platelet adhesion was prevented by the pre-treatment of the wells with 200 μL 1% bovine serum albumin for 1 h at 37° C. Following three washing steps, 50 μL PRP (treated with 100 μg/mL NAC or vehicle for 30 min at 37 °C) were added to each well and incubated at 37 °C without stirring to allow platelet adhesion. After 1 h, non-adherent platelets were removed, the plate was washed, and adherent cells were quantified through the measurement of the acid phosphatase activity. Briefly, 150 μL of acid phosphatase substrate (100 mmol/L citrate buffer pH 5.4, containing 5 mmol/L p-nitrophenyl phosphate and 0.1% Triton X-100) was added to each well. After 1 h incubation at 37 °C, the reaction was stopped by the addition of 100 μL NaOH 2 N. The p-nitrophenol produced was then measured by reading the absorbance at 405 nm (Infinite M Plex, Tecan, Tecan S.r.l., Cernusco sul Naviglio, Milan, Italy). A set of experiments was performed using tirofiban (Sigma-Aldrich S.r.l.), an αIIbβ3 antagonist. PRP was treated with tirofiban 5 μg/mL, for 30 min at 37 °C before the adhesion assay.
+ Open protocol
+ Expand
4

Characterization of Epithelial-Mesenchymal Transition

Check if the same lab product or an alternative is used in the 5 most similar protocols
Penicillin G/streptomycin, phosphate-buffered saline (PBS), Triton X-100, bovine serum albumin, collagenase type I, and trypsin were purchased from JiNuo (China). High-glucose DMEM was obtained from Gibco (China), and fetal bovine serum (FBS) was purchased from Gibco (SA). Cisplatin, 5-fluorouracil, puromycin, and collagen type I were purchased from Sigma (USA). Cisplatin was dissolved in dimethylformamide (DMF), 5-fluorouracil in DMSO, and puromycin in PBS in order to make stock solutions that were then stored at −20°C. collagen type I (5 mg/mL) was diluted to 1 mg/mL. DAPI (4,6-diamidino-2-phenylindole·HCl) in PBS was obtained from Roche, and goat anti-mouse and rabbit IgG, secondary antibody-TIRTC, and secondary antibodies were obtained from ZSGB-Bio (China). Antihuman-E-cadherin rabbit (ab40772), antihuman-vimentin rabbit (ab92547), and antihuman-β-catenin rabbit antibodies (ab9274) were obtained from Abcam (UK). Antihuman-pan-CK mouse antibody (C11) and N-cadherin rabbit antibody (C4061) were obtained from Cell Signaling Technology (China), and anti human-β-actin and secondary goat anti-rabbit antibodies were obtained from Boster (China). Antibodies were diluted with 5% FBS to working concentrations unless otherwise mentioned.
+ Open protocol
+ Expand
5

Collagen-Mediated Transfection and Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Collagen type I was purchased from Roche (Basel, Switzerland). Lipofectamine 3000 transfection kit (L300008), Silencer negative control siRNA (AM4611), mouse Dusp22 siRNA (#287290), and Mapk14 siRNA (#240556) were obtained from Invitrogen (Waltham, MA, USA). The anti-CD68 (ab201340) and anti-cytokeratin (ab9377) antibodies were purchased from Abcam (Cambridge, UK). BML-260(sc-223822A) was purchased from Santa Cruz Biotechnology (Dallas, TX, USA).
+ Open protocol
+ Expand
6

Cultivation of Human Mesothelial and Gastric Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Non-malignant immortalized omental-derived human peritoneal mesothelial cells (HPMCs) were cultured in DMEM/F-12 supplemented with 10% fetal bovine serum (FBS), 100 μg/ml EGF (epidermal growth factor), l-glutamine (200 mmol/L), and penicillin/streptomycin (PS) (5000 U/mL; Invitrogen) in flasks pre-coated with 15 μg/ cm 2 collagen type-I (Roche Applied Science, Mississauga, ON) at 37 0 C in 5% CO 2 .
MKN-45 and SNU-5 are poorly differentiated human gastric adenocarcinoma cell lines. MKN-45 were cultured in DMEM 1 g/L glucose supplemented with 10% FBS and 5000 U/mL PS. SNU-5 were cultured in RPMI-1640 medium supplemented with 20% FBS, l-glutamine (200 mmol/L), and PS (5000 U/mL). The murine gastric cancer cell line NCC-S1M was maintained in RPMI-1640 medium supplemented with 10% FBS, 100 U/mL penicillin, and 0.1 mg/mL streptomycin at 37 0 C in 5% CO 2 .
+ Open protocol
+ Expand
7

Mouse Keratinocyte Adhesion Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immortalized mouse keratinocytes were seeded into 96-well plates coated with bovine serum albumin (BSA) or different concentrations of collagen type I (Roche), collagen type IV (Sigma), or fibronectin (Corning, Corning, NY). The assay was performed as previously described [33 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!