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11 protocols using linuron

1

Radiolabeled Linuron Analytical Standard

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Linuron ([3-(3,4-dichlorophenyl)-1-methoxy-1-methyl urea] PESTANAL®, analytical standard) was purchased from Sigma Aldrich. [phenyl-U-14C] Linuron (16.93 mCi mmol–1, radio- chemical purity > 95%) was purchased from Izotop.
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2

Astrocyte Cytokine Response Protocols

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Human cells were plated at 20,000 cells/mL into 12 well plates. Once cells were 80% confluent, they were treated under the indicated conditions. Astrocytes were treated with vehicle (1X PBS at 1:1000 in culture medium), 20 μM linuron (#36141, Sigma-Aldrich, 20 mM stock in EtOH), 100 ng/mL IL-1ß (#401-ML-005, R&D Systems, 100 μg/mL stock in PBS), 50 ng/mL TNFα (#410-MT-010, R&D Systems, 100 μg/mL stock in PBS), and 50 μM STF083010 (#SML0409, Sigma-Aldrich, 50 mM stock in DMSO). RNA was isolated from human astrocytes by lysing with Buffer RLT (Qiagen) and was purified in the same manner as mouse RNA followed by RT-PCR, which was performed in the same manner as mouse samples. Human probes used in this study were: EDEM1 (Hs00976004_m1), NOS2 (Hs01075529_m1), and GAPDH (Hs02758991_g1).
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3

HPLC-MS/MS Multianalyte Quantification

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Methanol HPLC Ultragradient Gold, formic acid 99% and ammonia solution 25% were purchased from Carlo Erba Reagents, SAS (Marseille, France). H2O - Pierce™. Water, acetonitrile and formic acid LC-MS grade Optima® were from Fisher Chemical (Hampton, NH, USA), state abbrev if USA, country). Caffeine-13C3 (99%, 1 mg/mL in methanol) was obtained from Sigma-Aldrich (Schnelldorf, Germany). Standards (purity ≥97%) of all the chemicals listed (tert-butylazine; desethyl-tert-butylazine; dimethoate; atrazine; desethylatrazine; tebuconazole; alachlor; omethoate; bentazone; diuron; linuron; chlorotoluron; cymoxanil; thiamethoxam; clothianidin; imidacloprid; acetamiprid; thiacloprid; simazine; isoproturon; cybutryne; methiocarb; quinoxyfen; chlorpyrifos; 2,4D; MCPP; aclonifen; bifenox; MCPA; dichlorvos; bezafibrate; ibuprofen; amoxicillin·3H2O; azithromycin; diclofenac; α-ethinylestradiol; β-estradiol; erythromycin; clarithromycin; trimethoprim; ciprofloxacin; enrofloxacin; sulfamethoxazole; bisoprolol; carbamazepine) were purchased from Sigma-Aldrich.
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4

Compound Treatment Effects on Cell Function

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Compound treatment was performed for 24 hours with compounds diluted in DMEM/F12+GlutaMAX that was supplemented with 10% FBS and 1% penicillin/streptomycin. Compounds used in these studies are: 0.2–20 μM linuron (#36141, Sigma-Aldrich, 20 mM stock in EtOH), 20 μM methyl carbamate (#246352, Sigma-Aldrich, 20 mM stock in EtOH), 20 μM naphthalene (#147141, Sigma-Aldrich, 20 mM stock in EtOH), 20 μM vinclozolin (#45705, Sigma-Aldrich, 20 mM stock in EtOH), 20 μM PFNA (#394459, Sigma-Aldrich, 20 mM stock in EtOH), 10 μM ATP (#P0756, NEB, 1:1000), 50 μM BD1063 (#SML0276, Sigma-Aldrich, 50 mM stock in PBS), 100 ng/mL IL-1ß (#401-ML-005, R&D Systems, 100 μg/mL stock in PBS), 50 ng/mL TNFα (#410-MT-010, R&D Systems, 100 μg/mL stock in PBS), 1 μM GSK2656157 (#504651, Calbiochem, 1 mM stock in EtOH), and 50 μM STF083010 (#SML0409, Sigma-Aldrich, 50 mM stock in DMSO).
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5

Modeling Experimental Autoimmune Encephalomyelitis

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All mice used were WT animals on the C57Bl/6 background. EAE was induced with 25 μg of MOG35–55 (#110582, Genemed Synthesis Inc.) mixed with complete Freund’s Adjuvant at a ratio of 1:1 (v/v at a concentration of 5 mg/mL. Mice received 2 subcutaneous injections of 100 μL each of the MOG/CFA mix. Mice then received a single intraperitoneal injection of pertussis toxin (#180, List Biological Laboratories) at a concentration of 2 ng/μL in 200 μL of PBS. Mice received a second injection of pertussis toxin at the same concentration two days after the initial EAE induction. Mice were monitored and scored daily thereafter. EAE clinical scores were defined as follows: 0 – no signs, 1 – fully limp tail, 2 – hindlimb weakness, 3 – hindlimb paralysis, 4 – forelimb paralysis, 5 – moribund, as described previously (Mayo et al., 2014 ; Rothhammer et al., 2016 ). For studies of the effects of Linuron on EAE, mice were injected intraperitoneally with 100 mg/kg of Linuron dissolved in corn oil (#C8267–500ML, Sigma-Aldrich) at a concentration of 12.5 mg/mL on alternating days starting at day 6 post-EAE induction. Sex differences were not analyzed but only a single sex was used within any set of EAE experiments. Mice were randomly assigned to treatment groups.
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6

Detailed Pesticide Protocol for Steroidogenesis Assays

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The following chemicals were used, all from Sigma-Aldrich unless otherwise stated: procymidone [Chemical Abstracts Service Registry Number (CASRN): 32809-16-8, 99.9% purity], vinclozolin (CASRN: 50471-44-8, 99.6% purity from Sigma-Aldrich for in vitro study and 99.5% purity from BOC Sciences for in vivo study), linuron (CASRN: 330-55-2, 99.7% purity from Sigma-Aldrich for in vitro study and 99.5% purity from Greyhound Chromatography and Allied Chem for in vivo study), fludioxonil (CASRN: 131341-86-1, 99.9% purity), cyprodinil (CASRN: 121552-61-2, 98% purity), dimethomorph (CASRN: 110488-70-5, >95% purity), imazalil (CASRN: 35554-44-0, >99% purity), quinoxyphen (CASRN: 124495-18-7, >99% purity), fenhexamid (CASRN: 126833-17-8, >99% purity), o -phenylphenol (CASRN: 90-43-7, 99% purity), λ-cyhalothrin (CASRN: 91465-08-6, >99% purity), and pyrimethanil (CASRN: 53112-28-0, >99% purity). Corn oil (C8267-2.5L9) and dimethyl sulfoxide (DMSO) were used as the vehicle for the in vivo and in vitro studies, respectively, and were purchased from Sigma-Aldrich. The respective positive controls for effects on steroidogenesis, prochloraz (CASRN: 67747-09-5, 98.5% purity), and forskolin (CASRN: 66575-29-9, 98% purity), were purchased from Dr. Ehrenstofer GmbH and Sigma-Aldrich, respectively.
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7

Adsorption of Organic Pollutants on Clays

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High-performance liquid chromatography (HPLC)-grade methanol, acetonitrile and pH buffers (4.0, 7.0 and 10.0) were purchased from VWR (Atlanta, GA, USA). Analytical standards for lindane, diazinon, linuron, trifluralin, paraquat and ammonium acetate were purchased form Sigma Aldrich (St. Louis, MO, USA). Sulfuric acid (H2SO4, 95–98%), PCP and 2,4,6-TCP were purchased from Aldrich Chemical Co. (Milwaukee, WI, USA). Ethylene glycol and formic acid (HCOOH, 88%) were purchased from Thermo Fisher (Waltham, MA, USA). CM was obtained from BASF (Lampertheim, Germany) with a total surface area of approximately 850 m2/g, an external surface area of 70 m2/g and cation exchange capacity equal to 97 cmol/kg [28 (link)]. SM clay was obtained from the Source Clay Mineral Repository at the University of Missouri-Columbia with an estimated cation exchange capacity equal to 75 cmol/kg. The generic formula for these clays is: (Na,Ca)0.3(Al,Mg)2Si4O10(OH)2⋅nH2O. Clays were sieved through 45 μm to achieve uniform particle size [28 (link),29 (link)]. Ultrapure deionized water (18.2 MΩ) was generated in the lab using an Elga™ automated filtration system (Woodridge, IL, USA) and used in all experiments.
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8

Linuron Synthesis and Labeling

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(which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.
The copyright holder for this preprint this version posted November 15, 2020. ; https://doi.org/10.1101/2020.11.15.383406 doi: bioRxiv preprint 6 Linuron (purity, 99.5%) was purchased from Sigma Aldrich (St. Louis, MO) and 14 C Linuron ([phenyl-U-14 C]-Linuron) (16.93 mCi mM -1 , radiochemical purity >95%) from Izotop (Hungary). 13 C Linuron ([phenyl-U-13 C] Linuron) was synthesized as described before (Lerner et al. 2020 ).
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9

Adsorption of Organic Pollutants on Clays

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High-performance liquid chromatography (HPLC)-grade methanol, acetonitrile and pH buffers (4.0, 7.0 and 10.0) were purchased from VWR (Atlanta, GA, USA). Analytical standards for lindane, diazinon, linuron, trifluralin, paraquat and ammonium acetate were purchased form Sigma Aldrich (St. Louis, MO, USA). Sulfuric acid (H2SO4, 95–98%), PCP and 2,4,6-TCP were purchased from Aldrich Chemical Co. (Milwaukee, WI, USA). Ethylene glycol and formic acid (HCOOH, 88%) were purchased from Thermo Fisher (Waltham, MA, USA). CM was obtained from BASF (Lampertheim, Germany) with a total surface area of approximately 850 m2/g, an external surface area of 70 m2/g and cation exchange capacity equal to 97 cmol/kg [28 (link)]. SM clay was obtained from the Source Clay Mineral Repository at the University of Missouri-Columbia with an estimated cation exchange capacity equal to 75 cmol/kg. The generic formula for these clays is: (Na,Ca)0.3(Al,Mg)2Si4O10(OH)2⋅nH2O. Clays were sieved through 45 μm to achieve uniform particle size [28 (link),29 (link)]. Ultrapure deionized water (18.2 MΩ) was generated in the lab using an Elga™ automated filtration system (Woodridge, IL, USA) and used in all experiments.
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10

Pesticide Standards Preparation and Characterization

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Atrazine, Atrazine-desethyl (DEA), Atrazine-desisopropyl (DIA), bromacil, carbendazim, chlorpyrifos, diuron, imazalil, linuron, metolachlor, prometryn, simazine, terbumeton, terbumeton-desethyl (TED) , terbuthylazine, terbuthylazine-desethyl (TD), terbutryn, thiabendazole, 3,4-dichloroaniline (3,4-DCA), 3,5,6-trichloro-2-pyridinol (TCP) were purchased from Sigma-Aldrich (Madrid, Spain), with a purity higher than 97%. The list of pesticides and TPs available for this study, as well as some physicochemical properties, are listed in Supplementary Material (Table SM1).
HPLC-grade methanol (MeOH), acetone (pesticide residue analysis quality) and formic acid (98-100%, LC-MS grade), were supplied by Scharlau S.L (Barcelona, Spain).
HPLC-grade water (resistivity of 18 MΩ cm) was obtained by purifying demineralised water (Millipore Ltd., Bedford, MA, USA).
Standard stock solutions (500 mg L -1 ) of each compound (except carbendazim) were prepared by dissolving 25 mg (±0.01 mg) of each solid compound in 50 mL of acetone considering the purity of each solid standard. Standard stock solution of carbendazim was prepared in MeOH. Individual stock solutions and working standard solutions were stored at -20 and 4℃ in the dark, respectively.
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