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47 protocols using celena s digital imaging system

1

Immunofluorescence Analysis of RUNX2 Expression

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MC3T3-E1 cells (2000 cells/cm2) were seeded on 3% gelatin-coated coverslips and allowed to attach in cover slips. Then, FO (0–100 µg/mL) was treated in the presence or absence of 30 µM DOI. After 3 days, the cells were fixed with 4% paraformaldehyde for 10 min at 37 °C and washed three times with ice-cold phosphate buffered saline (PBS). The fixed cells were permeabilized with 0.1% Triton X-100 for 10 min at room temperature. After washing with ice-cold PBS containing 0.1% tween-20 (PBST) for 5 min, the cells were blocked with 10% donkey serum and incubated with RUNX2 antibody (1:100 in 10% donkey serum) overnight at 4 °C. The cells were stained with Alexa Fluor® 488 secondary antibody for 2 h and counterstained with a nuclear staining die, DAPI (300 nM), for 10 min. After being washed three times with ice-cold PBST, the coverslips were mounted onto glass slides with Dako faramount aqueous mounting media and fluorescence images were captured by CELENA® S digital imaging system (Logos Biosystems, Anyang, Gyeonggi-do, Republic of Korea).
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2

Visualizing Oxidative Stress in Zebrafish

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The production of NO and ROS in zebrafish larvae was visualized using 4-amino-5-methylamino-2'7'-difluorofluorescein diacetate (DAF-FM-DA, Sigma-Aldrich Chemical Co.) and DCF-DA, respectively, 24 h after chemical treatment as previously described (Jeong et al., 2018[19 (link)]). In brief, zebrafish embryos (4 dpf) were transferred to 24-well plates and incubated with 5 µM DAF-FM-DA and 20 µM DCF-DA for 30 min and visualized using the CELENA® S Digital Imaging System (Logos Biosystems, Anyang, Gyeonggido, Republic of Korea). Fluorescence intensities were calculated using ImageJ software (Wayne Rasband, National Institute of Health, Bethesda, MD, USA) and expressed as a percentage compared to the untreated control.
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3

Osteogenic Differentiation of MG-63 Cells

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MG-63 cells (3 × 103 cells/mL) were seeded on 3% gelatin-coated coverslips and allowed to attach on cover slips overnight. Then, the different concentrations of FO (50 µg/mL and 100 µg/mL) were treated for 7 days. DEX (100 nM) was used as the positive control. The cells were fixed with 4% paraformaldehyde for 10 min at 37 °C and washed three times with ice- PBS and permeabilized with 0.1% Triton X-100 for 10 min at room temperature followed by washing with ice-cold PBST (PBS + 0.1% tween 20) for 5 min each. The cells were blocked with 10% donkey serum and incubated with anti-RUNX2 and anti-OSX antibodies (1:100 in 10% donkey serum) overnight at 4 °C. After washing with ice-cold PBST, fluorescent dye-conjugated secondary antibody was added (Alexa Fluor® 488 for anti-RUNX2 and Alexa Fluor® 647 for anti-OSX), incubated for 2 h at room temperature, and washed three times with ice-cols PBST for 5 min each. Then, the cells were incubated with DAPI (300 nM) for 10 min and washed three times with ice-cold PBST for 5 min to remove excessive DAPI. The coverslips were mounted onto glass slides with Dako faramount aqueous mounting media and fluorescence images were captured by CELENA® S digital imaging system (Logos biosystems, Anyang-si, Gyeonggi-do, Korea).
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4

Immunofluorescence Imaging of NF-κB and β-Catenin

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RAW 264.7 macrophages (1 × 104 cells/mL) were seeded on 3% gelatin-coated coverslips overnight and treated with the indicated concentrations of fisetin for 2 h prior to the exposure with LPS for 1 h. The cells were fixed with 4% paraformaldehyde (PFA) for 10 min at 37 °C, washed three times with ice-cold PBS, and permeabilized with 0.1% Triton X-100 for 10 min at room temperature, followed by washing with ice-cold PBS containing 0.1% tween 20 (PBST) for 5 min. The cells were blocked with 10% donkey serum and incubated with p65 and β-catenin antibody (1:100 in 10% donkey serum) overnight at 4 °C. After washing with ice-cold PBST, Alexa Fluor 488 and Alexa Fluor 647 secondary antibodies were added for p65 and β-catenin, respectively and incubated for 2 h at room temperature. For the counterstaining, the cells were incubated with DAPI (300 nM) for 10 min, washed three times with ice-cold PBST, and mounted with Dako Faramount Aqueous Mounting Media. Fluorescence images were captured by a CELENA S Digital Imaging System (Logos Biosystems, Anyang, Gyeonggido, Republic of Korea).
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5

Visualizing DR5 Expression in HCT116 Cells

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HCT116 cells were fixed with 3% formaldehyde for 15 min, followed by permeabilization with 0.5% Triton X-100 for 15 min. The cells were then blocked for 1 h with 2% bovine serum albumin and stained with rabbit monoclonal anti-human DR5 overnight at 4 °C. The cells were washed and then incubated with Alexa Fluor® 488-conjugated IgG. Nuclei were counterstained with 4′6-diamidine-2′phenylindole dihydrochloride (DAPI). The cells were visualized using fluorescence microscopy. For the live cell imaging, HCT116 cells were cultured in 8 well chamber slides and after chemical treatment, cells were washed with PBS and stained with 10 μM 2′7′-dichlorofluorescin diacetate (DCFDA). Live imaging was performed with CELENA® S digital imaging system (Logos biosystems; Anyang-si, Gyeonggi-do, Korea).
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6

Compound 9 Effects on Zebrafish Angiogenesis

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Zebrafish embryos collected from the blood vessel-specific EGFP fluorescent transgenic zebrafish line, Tg(kdrl:egfp), were either treated with 0.1% DMSO as a control or treated with different concentrations (10, 20, and 40 µM) of compound 9. The exposure to 9 commenced from the late gastrula stage at 10 hpf and was examined at 30 hpf when normal blood vessel formation was prominent in the control zebrafish. For bioimaging purposes, the assayed embryos were placed in 3% methylcellulose on a glass slide and live animal images were taken by a CELENA® S Digital Imaging System (Logos Biosystems, Anyang, Korea) [43 (link)].
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7

Immunofluorescence Imaging of SMAD3

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Cultured cells were washed three times with ice-cold PBS and then fixed in 4% paraformaldehyde at room temperature for 10 min. After that, the cells were washed three times with ice-cold PBS, permeabilized in 0.1% Triton X-100 (Sigma–Aldrich) in PBS for 10 min and washed three times with ice-cold PBS. The cells were blocked with 5% bovine serum albumin in PBS for 30 min. Fixed cells were incubated with anti-SMAD3 antibody (ab40854; Abcam) overnight at 4 °C and stained with Alexa Fluor-conjugated secondary antibodies (Life Technologies). Fluorescence images were obtained using a CELENA® S Digital Imaging System (Logos Biosystems).
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8

Visualizing Autophagy in TM Cells

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To monitor autophagy by live cell imaging, were transduced human TM cells with 5 pfu/cell of the replication-deficient adenovirus AdGFP-LC3 (kindly provided by Dr. Wen-Xing Ding, University of Kansas Medical Center). AdGFP was used as a control. Three days after transduction, the cell culture media was changed with TGFβ2 (10 ng/mL)-containing media and the cells were further incubated at 37 °C, 5% CO2 for 48 h. For starvation condition, the cell culture media was changed with Hank’s balanced salt solution (HBSS, GIBCO) and it was incubated for 6 h. Images were acquired with CELENA® S Digital Imaging System (Logos biosystems) and the images were processed by using Fiji, an image processing package.
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9

Microscopic Analysis of Cell Morphology

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Cell morphology was assessed using fluorescence microscopy upon F-actin and mitochondria staining, using phalloidin-conjugated Alexa Fluor 488 (Molecular Probes, Eugene, OR, USA) and MitoSpy™ Red FM (Biolegend, San Diego, CA, USA), respectively. Nuclei were counterstained with Hoechst 33342 (Enzo, Farmingdale, NY, USA). Stained cells were visualized using a Celena S digital imaging system (Logos Biosystems, Annandale, VA, USA). To perform the staining, at selected time points, the cultures were incubated with MitoSpy™ Red FM for 30 min at 37 °C. Subsequently, the cells were fixed with 3.7% paraformaldehyde, permeabilized with 0.1% Triton-X and blocked with bovine serum albumin (Sigma-Aldrich, St. Louis, MO, USA) to prevent non-specific interactions, at room temperature. The cells were then stained with phalloidin-conjugated Alexa Fluor 488 and Hoechst 33342, for F-actin and nucleus staining, respectively. Stained cells were subjected to microscopic analysis. Images were treated using the ImageJ software v.1.53k (National Institutes of Health, Bethesda, MD, USA). The assay was conducted in triplicates, across three independent experiments.
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10

Monitoring Bone Formation in Zebrafish

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In order to monitor bone formation in zebrafish larvae, calcein green fluorescent marker was used. To analyze vertebrae formation, zebrafish larvae at 3 dpf were treated with 0–100 µg/mL FO and media were replaced at 6 dpf with FO. At 9 dpf, the larvae were immersed in 0.05% calcein solution for 10 min and then rinsed in fresh water three times for 10 min. The larvae were anesthetized in 0.04% tricaine methanesulfonate solution and mounted on depression slides using 2% methylcellulose. Fluorescence images were captured by a CELENA® S digital imaging system (Logos Biosystems, Anyang, Gyeonggi-do, Republic of Korea).
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