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40 protocols using system 2000

1

FT-IR and GC-MS Analysis of Pd-NPs Capped by P. boryana Extract

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To detect the adsorption of functional groups, FT-IR analysis of PB-extract and Pd-NPs was recorded in attenuated total reflectance (ATR) mode on the PerkinElmer system 2000 instrument. The spectra for each sample were scanned three times and average values of percent transmittance were plotted against wavelength (4000–400 cm−1). GC–MS analysis of hexane extracts of P. boryana and PB-extract capped Pd-NPs was performed on Shimadzu QP-2010 Plus with Thermal Desorption System TD-20 instrument. Conditions for analysis were kept as follows: He flow at 1.2 mL/min, oven temperature from 80 to 260 °C at 4 °C/min, for 5 min, interface/inlet temperature were set as 280/250 °C. A 0.2 mL solution was injected at a 10:1 split ration at 70 eV. Data for signals obtained for various molecules such as retention time, peak percentage area, molecular mass, etc. was recorded based on the interpretation of the National Institute of Standards and Technology (NIST) library.
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2

Fourier Transform Infrared Spectroscopy of Peptide Films

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Fourier Transform Infrared (FTIR) spectra from films cast from peptide solutions were obtained at 4 cm−1 resolution using a Perkin Elmer System 2000 FTIR fitted with a ZnSe single bounce attenuated total reflectance accessory (MIRacle ATR, Pike Technologies, Fitchburg, WI, USA). A mercury cadmium telluride liquid nitrogen cooled detector was used. A minimum of 32 scans were co-averaged. Spectra obtained from four areas of each cast film were found to be highly reproducible.
Spectral manipulation was carried out using GRAMS AI v 9.1 (Thermo Fisher Scientific Inc., Waltham, MA, USA) as described in Weisman et al. [8 (link)] for honeybee silk. Spectra were baseline corrected by applying a linear offset at 1775 cm−1 and then were normalized on the strongest amide I feature. This manipulation also served to normalise the C–H modes, the intensities of which are not expected to be affected by conformational changes. Amide I band components were identified by both second derivative spectroscopy and Fourier self-deconvolution methods. Fits for similar amide I band contours, for example, the methanol–water treated peptides, were initiated from the same base set of band components.
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3

Infrared Spectroscopy Analysis of Plant-Derived Dyes

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The nature dye powder was obtained by a cold lyophilizer from camellia husks extract. The fabric samples were cut into powder and mixed with KBr. About 2.0 mg of the powder was mixed with 200.0 mg KBr and prepared in pellet form for FTIR testing. The chemical composition of samples was recorded on a Fourier transform infrared spectrometer (PerkinElmer System 2000, Germany) in absorbance mode with a range of 4000–400 cm−1 and a resolution of 8 cm−1.
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4

Characterization of Cp*Ru+ Fragments on HOPG

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The presence of the Cp*Ru+ fragment was characterized via Fourier transform infrared spectroscopy (FT-IR, Perkin Elmer System 2000) and X-ray photoelectron spectroscopy (XPS). The XPS spectra were recorded on a VG ESCALAB 220i spectrometer using Mg Kα radiation (1253.6 eV), which was operated at 15 kV and 20 mA. To exclude the effect of [Cp*Ru(CH3CN)3]+ residue on the substrate, the substrate was washed with copious amounts of ethanol prior to the measurements. To visualize the Cp*Ru+ fragments on the HOPG surface, we used an atomic force microscope (Digital Instruments NanoScope III) and a scanning tunneling microscope (Digital Instruments NanoScope III). PtIr tips were used in the STM measurements. During the STM measurement, an insulating liquid, 1-phenyloctane (Aldrich Chem.) was used between the tip and the surface to allow high-quality atomic-scale imaging. During operation, the bias voltages and tunneling currents were varied from -10 to -500 mV and from 50 pA to 1 nA, respectively, to obtain high-quality images. A confocal backscattering Raman spectrum with a spot size of approximately 4 μm2 was measured using a 40X objective focused through the cell window. Furthermore, 3.2 mW of 633 nm He–Ne laser was used as the excitation source.
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5

Characterization of Graphene Oxide Aqueous Solution

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A GO water solution (4mg/mL) was obtained from Advanced Graphene Products (Zielona Gora, Poland). In the experiment, dilutions were prepared in deionized water and sonicated for 15 minutes before use.
The MIR spectrum of the GO water solution was registered with KRS round plates in transmission mode. Five separate spectra of the working sample were registered, and an averaged spectrum was calculated. The Perkin Elmer System 2000 spectrometer was used for spectra registration, and analysis was performed in the Pegrams software.
The morphology of the GO flakes was examined using a TEM - JEM-1220 (JEOL, Japan) at 80 kV and a TEM CCD Morada 11 megapixels camera (Olympus Soft Imaging Solutions, Germany). The zeta potential of the GO solution was measured using a ZetaSizer Nano ZS model ZEN3500 (Malvern Instruments, UK).
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6

Biferrocene Schiff Base Adsorption on Aluminum

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FTIR-ATR was used for confirmation of the adsorption of biferrocene Schiff bases on surface of aluminium substrate using PerkinElmer System 2000. Vibrational frequency data of pure biferrocene Schiff bases and their adsorbed product on aluminium AA2219-T6 alloy after scratching it from the surface, was collected in the frequency range 4000–400 cm−1.
The corroded surface morphology of the samples was observed by using a scanning electron microscope (SEM) TESCAN VEGA3 operating at 12 kV accelerating voltage. To investigate the surface morphology of the aluminium alloy AA2219-T6 in the absence and presence of anticorrosive materials, SEM images of polished aluminium alloy were taken before and after immersion in 0.1 M HCl in the absence and presence of 100 ppm of the inhibitor.
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7

Spectroscopic Analysis of 3,4,5-tHCA Derivatives

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The IR spectrum of 3,4,5-tHCA was recorded with the Cary 630 FTIR Agilent Technologies spectrometer (Santa Clara, CA, USA) within the range of 400–4000 cm−1. Spectral resolution was 1 cm−1. Solid sample was measured in the KBr matrix. Raman spectrum was recorded in the range of 4000–100 cm−1 with an FT Raman instrument of the Perkin–Elmer System 2000 (Billerica, MA, USA). Spectral parametersof three other derivatives were compiled on the basis of literature data [24 (link),25 (link),26 (link)]. The UV spectra of derivatives dissolved in methanol were scanned on a DR 5000 HACH UV-Vis spectrophotometer (Loveland, CO, USA) in the wavelength range of 200–400 nm. The concentration of the derivatives was 0.01 mM. The NMR spectrum of the DMSO 3,4,5-tHCA solution was recorded with a Bruker Avance II 400 MHz unit at room temperature. Tetramethylsilane was used as an internal reference. The chemical shift values in the 1H and 13C NMR spectra of the three other derivatives were summarized based on the literature data [24 (link),25 (link),26 (link),27 (link)].
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8

Plasma Effects on Treatment Bags

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For the purpose of the effect of the plasma on the treatment bags, two different analysis level have been carried out. First, Fourier Transform Infrared (FTIR) measurements were collected to determine if a chemical reaction of the plasma exposed bags had taken place. Chemical changes produced at the surface after plasma treatment were studied using FTIR with Attenuated Total Reflectance (ATR) accessory. FTIR spectra were recorded with Perkin–Elmer System 2000, in the 4000–500 cm-1 wave-number range with 10 scans at a resolution of 2 cm-1. Second, X-ray Photoelectron Spectrometry (XPS) analysis was utilized to determine the changes of the chemical composition at the internal surfaces of the sealed bag using the ESCALAB 250 system (Thermo-VG Scientific Co., Ltd., England). The X-ray source was Al Kα (15 kV) at an operating power of 150 W and a 500 μm in spot size.
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9

FTIR Analysis of Fat Samples

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Infrared spectra were recorded with use of Perkin Elmer System 2000 spectrometer in middle range, i.e., 4000–400 cm–1. The resolution was set at 2 cm–1. Drop of fat of 0.05 cm3 volume was placed between ZnSe plates to form film. Instrument was operated by Pegrams software running on Windows 95.
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10

Functional Group Analysis of Biogenic AgNPs

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The different functional groups of biogenic AgNPs and plant extract were measured using a PerkinElmer system 2000 instrument. The spectra for each sample were scanned three times, and the average values of percent transmittance were plotted against wavelength (4000–400 cm−1).15 (link)
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