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Blank disk

Manufactured by Thermo Fisher Scientific
Sourced in United Kingdom

The Blank Disk is a circular, flat piece of material used in various laboratory applications. It serves as a substrate or platform for hosting samples, reactions, or other experimental components. The Blank Disk is a versatile and widely used piece of lab equipment.

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8 protocols using blank disk

1

Bacterial Growth Inhibition Assay

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Bacteria were cultured on nutrient broth media at 28°C for 24 h. Then, 10 μL of the bacterial solution was dropped on a blank disk (Oxoid) that had been placed on agar media. Samples were incubated at 28°C for 24–72 h. The inhibition zone formed around the disk was measured using an electronic digital caliper (mm).
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2

Antibiotic Disk Diffusion Assay

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A stock solution of 10 mg/mL was made for each compound under observation using DMSO as a solvent. Each of these stock solutions was then diluted by a factor of 1:2 to bring the concentration to 5 mg/mL. The diluted solutions were then filter-sterilized using a 0.2-µm nylon filter, and 10 µL of the 5 mg/mL stock was pipetted onto a blank disk (i.e. 50 µg/disk; Oxoid Limited, Hampshire, UK). All bacterial isolates were matched to a 0.5 McFarland standard (in 0.9% NaCl) before they were swabbed onto nutrient agar. The controls used were a 10 µg colistin disk (Oxoid), 10 µL of DMSO and a plate swabbed with saline from the dispenser used.
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3

Enterocins Screening in Lactic Acid Bacteria

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The research has been conducted in Microbiology Laboratory, Faculty of Mathematics and Natural Science, Universitas Brawijaya, in 2019. Tools used to carry out the research include PCR (Eppendorf), electrophoresisi (Mupid-exU), UV-Geldock, centrifuge (Hettich), vortex spindown, Micropipette, incubator shaker, de Man Rogosa Sharpe Agar (MRSA) (Merck, Darmstadt, Germany), de Man Rogosa Sharpe Broth (MRSB) (Merck, Darmstadt, Germany), Ammonium sulphate, Milipoure, cellophane membrane, NA, blank disk (Oxoid), Proteinase-K, S.typhi, i-genomic Soil DNA Extraction Mini Kit (iNtRon), master mix (Green Go Taq, Promega), Nucease Free Water (NFW), ethidium bromide (etbr), DNA template and primer gene encoding enterocins EntA f (5'-GGT ACC ACT CAT AGT GGA AA-3') r (5'-CCC TGG AAT TGC TCC ACC TAA-3'), EntB f (5'-CAA AAT GTA AAA GAA TTA AGT ACG-3') r (5'-AGA GTA TAC ATT TGC TAA CCC/TCC TGC AAT ATT CTC TTT AGC-3'), EntP f (5'-GCT ACG CGT TCA TAT GGT AAT-3') r (5'-TCC TGC AAT ATT CTC TTT AGC) and EntL50A/B f (5-ATG GGA GCA ATC GCA AAA TTA-3') r (5'-TTT GTT AAT TGC CCA TCC TTC / CCT ACT CCT AAG CCT ATG GTA-3').
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4

Antimicrobial Activity of Enterocin

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The precipitate and crude enterocin analysis was then assayed for antimicrobial activity against S. typhi using the disk diffusion method. The surface of Petri dishes containing soft NA (0.8%) was spread 100 µL with S.typhi density of 10 6 cells/mL. The precipitates or crude enterocin was dropped 50 µL on a blank disk (Oxoid), then dried until all was absorbed by the disc, incubated at 4 o C, 30 minutes. The cultures were incubated at 37 o C, 24 hours. The antimicrobial activity is then calculated (Avaiyarasi et al., 2016; Thirumurugan et al., 2015) . Lz = clear zone area (mm) Ls = well area (mm) V = Sample volume (mL) Determination of crude enterocin as a protein was characterized by Proteinase-K's addition to the crude enterocin, then antimicrobial activity against S. typhi was assaying.
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5

Disk Diffusion Test for Antifungal Efficacy

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Disk diffusion test was conducted in accordance with the Clinical and Laboratory Standards Institute (CLSI) M44 with slight modification (CLSI 2018). In brief, sabouraud dextrose agar (SDA, Oxoid, United Kingdom) was used as the medium instead of mueller hinton agar. Disk diffusion test was performed for three repetitions (triplo) and the mean was calculated to determine the inhibition zone. Peppermint oil was impregnated on a blank disk (Oxoid, United Kingdom) for one hour at 37°C. Fluconazole 25µg and ketoconazole 15µg disks (Liofilchem, Italy) were used as the positive control, while blank disk was used as the negative control.
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6

Fosfomycin Susceptibility Testing Protocols

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Fosfomycin susceptibility was determined in Mueller–Hinton (MH) by agar dilution (gold standard) and disk diffusion methods according to CLSI/EUCAST guidelines [14 ,15 ]. For the agar dilution method, bacterial cultures were adjusted to the 0.5 MacFarland standard and diluted 1:10 in saline solution. Then, 2 μL (approximately 104 CFU) were spotted onto the agar surface. Once the spots on the agar were absorbed, the plates were incubated at 35 ± 2 °C for 16 h. The MIC was defined as the lowest antibiotic concentration that inhibited visible growth. Strains with a MIC value for the clinical strains of ≤4 μg/mL were considered fosfomycin-susceptible, between >4 and ≤32 μg/mL as LLFR (still susceptible), and >32 μg/mL as fosfomycin-resistant. For the disk diffusion method, disks containing 200 μg of fosfomycin with 50 μg, 25 μg, 15 μg, and without G6P were used. Blank disks (Oxoid) were impregnated with 25 μL of each fosfomycin–G6P concentration. Diameter (in millimeters) of the zone of complete inhibition was determined after 16–20 h of incubation at 35 ± 2 °C. MICs and disk diffusion tests were repeated 3 times for each strain. Final data are the modal value from 3 repetitions. E. coli ATCC 25922 (laboratory collection) was used as the MIC control strain.
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7

Antimicrobial Susceptibility Evaluation

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Antimicrobial susceptibility assays were performed according to a method described in our recent studies [9 (link),10 (link)]. Blank disks (6 mm, Oxoid, Basingstoke, UK) and Mueller–Hinton (MH) were purchased from Oxoid, Basingstoke, UK. An aliquot of 10 μL crude extract (500 μg/mL) was added onto each disk and the bacteriostatic effect on the corresponding strains evaluated by measuring the diameter of the inhibition zone after incubation at 37 °C for 12 h. A gentamicin disk (10 μg, Oxoid, Basingstoke, UK) was used as a positive control, while the methanol phase with water and chloroform phase with anhydrous ethanol were used as negative controls.
Broth dilution testing (microdilution) was carried out to determine MICs of the extracts according to the standard method issued by the Clinical and Laboratory Standards Institute, USA (CLSI, M100-S28, 2018). The standard solution of gentamicin (100 µg/mL) was purchased from the National Standard Material Information Center, Beijing, China [9 (link)].
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8

Antimicrobial Activity Evaluation by Agar Diffusion

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The antimicrobial activity of each solution was evaluated by the agar diffusion method [32 (link)]. Each solution was combined with the emulsifier polysorbate 80 in the proportion of 1:10 (polysorbate 80: natural compound solution). Blank disks (Oxoid, Basingstoke, United Kingdom) were immersed in each solution and left submerged for 30 min to absorb the solution. Sterile swabs were immersed in each inoculum suspension (prepared as described in Section 2.4.1) and spread in Müeller-Hinton Agar (MHA, Biokar diagnostics) plates. Disks containing the solutions were added to the top of the culture medium, and plates were incubated at 30 °C for 24 h. Disks adsorbed with distilled water, polysorbate 80, acetic acid (PanReac), and ethanol (Sigma) were used as controls.
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