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2 protocols using vimentin

1

Multiparametric Tissue Profiling with IMC

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Iridium DNA Intercalator (Fluidigm, 201192A) and metal-labeled antibodies pan-keratin (Nd 148, Fluidigm 3148020D), cytokeratin 7 (Dy 164, Fluidigm 3164028D), Ki-67 (Er 168, Fluidigm 3168022D), HLA-DR (Yb 174, Fluidigm 3174023D), α-SMA (Pr 141, Fluidigm 3141017D), vimentin (Nd 143, Fluidigm 3143029D), and collagen I (Tm 169, Fluidigm 3169023D) were purchased from Fluidigm. Tissue microarray (TMA) samples were purchased from BioMax (PA807). Recombinant mortalin was purchased from Novus Biologicals (NBC1-18380).
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2

FGF2 and FGFR1 Signaling Pathway Assay

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Recombinant FGF2 was purchased from Gibco (#PHG0024). Heparin sulfate was purchased from StemCell Technologies (#07980). The following antibodies were used (all primary antibodies are rabbit derived unless otherwise noted): anti-FGFR1 (#9740), phospho-FGFR (Y653/654, #3476, mouse derived), phospho-FRS2 (Y436, #3861; Y196, #3864), PLCγ (#5690), phospho-PLCγ (Y783, #2821), ERK (#4695), phospho-ERK (T202/Y204 #4370), Akt (#4691), phospho-Akt (S473 #4060), STAT3 (#4904), phospho-STAT3 (Y705, #9145), E-cadherin (#3195), Vimentin (#5741), ZEB1 (#3396), N-cadherin (#13116), HIF1α (#14179), Bcl-XL (#2764), Hsp90 (#4877), FGF2 (#61977), TGFβ (#3711), Cyclin D1 (#2978), GAPDH (#2118), horseradish peroxidase (HRP)-linked rabbit IgG secondary antibody (#7074) and HRP-linked mouse IgG secondary antibody (#7076), from Cell Signaling Technology. Anti-FRS2 (#10425, mouse derived) was purchased from Abcam. AZD4547 was purchased from Selleck Chemistry. The following CyTOF antibodies were purchased from Fluidigm Inc.: STAT3 (#3173003A), pSTAT3 (#3158005A), Vimentin (#3154014A), TGFβ (#3163010B), SOX2 (#3150019B), and Nanog (#3169014A). Custom antibody-metal conjugations were performed using kits purchased from Fluidigm, Inc. (PRD002) and carrier-free antibodies targeting FGFR1 (#9740), pFGFR1 (#3476), pFRS2 Y196 (#3864), and ZEB1 (#3396) were purchased from Cell Signaling Technology.
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