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Mirna specific taqman mgb probes

Manufactured by Thermo Fisher Scientific
Sourced in United States

MiRNA-specific TaqMan MGB probes are a type of molecular probes designed for the detection and quantification of microRNA (miRNA) molecules. These probes utilize the TaqMan technology and minor groove binder (MGB) chemistry to provide specific and sensitive detection of miRNA targets.

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2 protocols using mirna specific taqman mgb probes

1

Quantifying miR-1294 and c-Myc in OSCC

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The levels of miR-1294 in the 24 OSCC tissues cells and HSC2, HSC4, SAS and KON cells were detected by qRT-PCR. In detail, the total RNA was extracted from the 24 specimens using the TRIzol reagent, according to the manufacturers' s protocol (Invitrogen; Thermo Fisher Scientific, Inc., Waltham, MA, USA). The level of miR-1294 was then detected by TaqMan miRNA RT Real-Time PCR (17 (link)). Single-stranded cDNA was synthesized by the TaqMan MicroRNA Reverse Transcription Kit (Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA), and then amplified by TaqMan Universal PCR Master Mix (Invitrogen; Thermo Fisher Scientific, Inc.) and miRNA-specific TaqMan MGB probes (Applied Biosystems). The U6 snRNA was used for normalization (18 (link)). The c-Myc mRNA levels in the OSCC tissues were assayed by real-time qPCR (delta Cq method of quantification) using the SYBR-Green reagent (Shanghai Shengong Biotechnology Co., Ltd., Shanghai, China) (19 (link),20 (link)). The primers used for c-Myc (human) are listed as follows: F, 5′-AATGAAAAGGCCCCCAAGGTAGTTATCC-3 and R, 5′-GTCGTTTCCGCAACAAGTCCTCTTC-3; GAP DH F, 5′-CTGACTTCAACAGCGACACC-3′ and R, 5′-TAGCCAAATTCGTTGTCATACC-3′. The following thermocycling conditions were maintained: 94°C for 5 min; 30 cycles of 94°C for 45 sec, 55°C for 45 sec and 72°C for 1 min; and 72°C for 10 min (21 (link)).
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2

Quantitative Analysis of miR-30 Family

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Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) was performed to determine the relative expression level of specific miR-30 family members (miR-30a/b/c/d/e). Total RNA was extracted from COV434 cells using TRIzol reagent (Invitrogen Life Technologies, Carlsbad, CA, USA), according to the manufacturer’s instructions. The expression levels of the various miRNAs were detected using TaqMan® RT-qPCR miRNA assays. Single-stranded complementary DNA was synthesized using a TaqMan MicroRNA Reverse Transcription kit, and amplified using TaqMan Universal PCR Master mix and miRNA-specific TaqMan MGB probes (all TaqMan products were purchased from Applied Biosystems Life Technologies, Foster City, CA, USA). U6 small nuclear RNA was used for data normalization. Each sample was measured in triplicate and the experiment was repeated a minimum of three times to ensure miRNA detection.
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