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20 protocols using hbss solution

1

Fumarate Hydratase Inhibitor Screening

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Recombinant human fumarate hydratase (with 6 histidine tag in the N-terminal of protein), dithiothreitol (DTT) and HBSS solution were purchased from Thermofisher Scientific (Waltham, MA). L-malate dehydrogenase from pig heart, diaphorase from clostridium kluyveri, β-NAD (NAD+), resazurin, Brij 35, sodium fumarate dibasic, malic acid and horse radish peroxidase (HRP) were purchased from Sigma (St. Louis, MO). Fumarate hydratase-IN-2 was purchased from MedChem Express (Monmouth Junction, NJ). Compound 8 was purchase from Enamine (Monmouth Junction, NJ). Amplex Red (10-Acetyl-3,7-dihydroxyphenoxazine) was purchased from Cayman Chemical (Ann Arbor, MI). Six libraries were screened, including Sytravon (a retired Pharma screening collection that contains a diversity of novel small molecules, NCATS), NPACT (NCATS Pharmacologically Active Chemical Toolbox, NCATS), NPC (NCATS Pharmaceutical Collection, NCATS),16 MIPE (Mechanism Interrogation Plate, NCATS), Kinase inhibitor library (an in-house collection of kinase inhibitors, NCATS) and LOPAC (1,280 Pharmacologically Active Compounds Sigma-Aldrich, St. Louis, MO) libraries.
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2

Mouse Dorsal Root Ganglion Neuron Isolation

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Mouse DRG neurons were extracted and dissociated as previously described [55 (link)]. Briefly, the mice were euthanized by cervical dislocation. The spinal cord was removed and 20–40 DRGs were dissected and washed in cold HBSS solution (Thermo Fisher Scientific). For IHC, whole ganglia were directly fixed for 2 h in 4 % PFA. For ICC, ganglia were then incubated in 900 U/mL type XI collagenase (Sigma-Aldrich) and 5.46 U/mL dispase (Thermo Fisher Scientific) for 45 min at 37 °C in 5% CO2. After enzymatic treatment, the ganglia were mechanically dissociated using fire-polished glass pipettes in calcium-free solution containing HBSS (Thermo Fisher Scientific), 1% MEM-Vit (Thermo Fisher Scientific), 10% fetal bovine serum (Thermo Fisher Scientific) and 100 mg/mL penicillin/streptomycin. The cell suspension was centrifuged, and the pellet was resuspended in culture medium containing: MEM (Thermo Fisher Scientific), 1% MEM-Vit (Thermo Fisher Scientific), 10% fetal bovine serum (Thermo Fisher Scientific) and 100 mg/mL penicillin/streptomycin. The cells were then seeded onto 6 mm diameter glass coverslips previously coated with 0.01% poly-L-lysine (Sigma-Aldrich, St. Louis). Twenty-four hours after seeding, the cells were subjected to calcium imaging or fixed for 10 min in 4%PFA.
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3

PKC Activity Monitoring in CHO-K1 Cells

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CHO-K1 cells co-transfected with mCherry-PKCα and CKAR2 (C Kinase Activity Reporter) were maintained in HBSS solution (ThermoFischer) during the experiment. 1 ml of LB broth was added to settle a baseline. After 5 minutes S. aureus culture supernatants were added and, after 10 minutes, 1 μM of the PKC inhibitor Gö6976 was added. To study the effect of α-hemolysin, 10 μg/ml or 30 μg/ml of pure protein was added to the cells, followed by 200 nM of the PKC activator PDBu and finally 1 μM Gö6976. Images were acquired using the microscope Zeiss Axiovert (CarlZeiss Microimaging, Inc.) with the digital camera MicroMax (Roper-Princeton Instruments) controlled by the software Metafluor (Universal Imaging, Corp.). FRET (Föster Resonance Energy Transfer) and CFP (Cyan Fluorescent Protein) were obtained every 25 seconds. YFP (Yellow Fluorescent Protein) and mCherry emissions were also obtained as transfection controls.
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4

Evaluating Neurotransmitter Vesicle Dynamics

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iPSC-derived dopaminergic neurons were grown until 48 DIV and were then imaged with FM1-43 (Thermo Fisher Scientific). Cells were washed in HBSS−/− supplemented with 5 mM glucose and 10 mM HEPES. 2 μM FM1-43 was then applied for 1 min before uptake was induced with 75 mM NaCl and 10 mM KCl and left for 1 min before being washed in HBSS−/− solution (Thermo Fisher Scientific). Images were acquired at 37C in 5% CO2 on the Opera Phenix (Perkin Elmer) at 63× magnification. Images were quantified in ImageJ by measuring the fluorescence intensity of puncta at each timepoint.
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5

Assessing Mitochondrial Membrane Potential

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MMP was measured by using fluorescent probe JC-1 (Santa Cruz, Cat. No.: sc-364, 116). After galangin (20 μM) treatment for 24 and 48 h, MGC 803 cells were rinsed with 1×HBSS solution (Gibco, Cat. No.: 14025–092) and incubated with JC-1 (10 μM) at 37°C for another 30 min. After that, the cells were rinsed with 1 × HBSS solution once again, and the fluorescent intensity of the JC-1 monomers and aggregates was detected under different conditions (Ex (λ) 485 nm, Em (λ) 530 nm for monomers; Ex (λ) 530 nm, Em (λ) 590 nm for aggragates) on a microplate reader (Varioskan Flash, Thermo Scientific, United States). Fluorescent images were captured under a fluorescent microscope (IX81).
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6

Circadian Rhythm Monitoring in Per2 Mice

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Per2::LUC mice were euthanized by CO2 aspiration 3 to 5 hours before lights off in a 14-hour/10-hour light/dark cycle, and tissues were immediately dissected in a cold HBSS solution (Life Technologies). The Iris-CB complex with supporting tissues (i.e., a small rim of associated sclera) was cultured on cell culture inserts (PICM0RG50; Millipore, Burlington, MA, USA) in sealed dishes with Dulbecco's modified Eagle's medium containing a B-27 supplement (Life Technologies), 352.5 μg/ml sodium bicarbonate, 10 mM HEPES (Life Technologies), 25 U/ml penicillin, 25 μg/ml streptomycin (Life Technologies), and 0.1 mM luciferin potassium salt (Biosynth, Staad, Switzerland). All tissue cultures were incubated at 37°C, and their bioluminescence were recorded for 1 minute at 7.5-minute intervals by using a Lumicycle luminometer (Actimetrics, Wilmette, IL, USA). The overall recording period was at least 8 days. The obtained bioluminescence was detrended by using a polynomial fit line to eliminate a steady decline of background bioluminescence. The period of oscillation was decided by best-fit sine wave analysis in the Lumicycle Analysis software.
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7

Dissociation and Culture of Murine Hippocampal Neurons

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Briefly, hippocampus from embryonic day 18 (E18) mouse (timed pregnant C57BL/6J, the Jackson Laboratory, 000664 |Black 6) were isolated and digested with 0.25% trypsin-EDTA (1×) (T4549, Sigma) at 37 °C for 15 min, washed in HBSS solution (Life Technologies, 14175-079) three times, and then transferred to the NB medium consisting of Neurobasal medium (Life Technologies, 12349-015) supplemented with 37.5 mM NaCl, 2% (vol/vol) B27 supplement (Life Technologies, 17504-044), 1% Glutamax (Life Technologies, 35050-061), and 1% penicillin-streptomycin (Life Technologies, 15140-122). After washing once with NB media, the tissues were pipetted up and down in NB medium until the tissues were mostly dissociated. Dissociated cells were then counted and plated onto poly-D-lysine-coated 18-mm coverslips (NeuVitro, GG-18-1.5-pdl) at 70,000 -100,000 cells per coverslip to achieve an optimal density for imaging and minimize bundling and overlap between cells. Cells were fixed at 18 or 10 days in vitro as indicated.
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8

Isolation and Culture of Rat Cardiomyocytes

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Isolation and culture of neonatal rat cardiomyocytes were performed as previously described56 (link). Briefly, Spraque Dawley (postnatal 1–2 days) were euthanized using isoflurane inhalation followed by cervical dislocation. Then ventricles were digested in HBSS solution containing 0.1% trypsin (Invitrogen, USA) and 0.05% type II collagenase (Worthington, USA). Cells were pre-plated for 2 h and the supernatant containing purified cardiomyocytes was collected and cultured for another 48–72 h before transfecting the adenovirus.
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9

Single-cell isolation from mouse heart

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Samples were obtained from Left ventricular at indicated time points. Single cell suspensions were prepared as described previously, with some modifications (20 (link)). Briefly, hearts were cut into small pieces and digested with 0.3 mg/ml collagenase II (Invitrogen, USA), 0.3 mg/ml dispase II (Sigma, USA), DNase I (Biosharp, China) and 2.5 mM Cacl2 (Mackin, china) in HBSS solution (Invitrogen, USA) for 45 min at 37°C with gentle agitation. After the digestion, primary cardiac cells were obtained using Percoll (Solarbio ®) gradient separation and passed through 70-μm cell strainer. The obtained cells were washed with RPMI-1640 cell culture medium for further analysis.
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10

Isolation and Culture of Dorsal Root Ganglia

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DRGs were harvested from thoracic spinal levels of adult Pvalbcre;Rosa26Ai14 and Pirtcre;Scn1a-floxed (6–16 weeks) mice of both sexes and transferred to Ca2+-free and Mg2+-free HBSS solution (Invitrogen, 14170-112). Upon isolation, processes were trimmed, and ganglia were transferred into collagenase (1.5 mg/mL; Type P, Sigma-Aldrich, 11213865001) in HBSS for 20 min at 37°C followed by TrypLE Express (Thermo Fisher, 12605-010) for 3 min with gentle rotation. TrypLE was neutralized with 10% horse serum (heat-inactivated; Invitrogen, 26050-070) and supplemented with culture media (MEM with l-glutamine, Phenol Red, without sodium pyruvate, Thermo Fisher, 11095-080), containing 10,000 U/mL penicillin-streptomycin (Thermo Fisher, 15140-122), MEM Vitamin Solution (Invitrogen, 11120-052), and B-27 supplement (Thermo Fisher, 17504-044). Serum-containing media was decanted and cells were triturated using a fire-polished Pasteur pipette in the MEM culture media described above. Cells were resuspended and triturated using a plastic pipette tip. Cells were plated on glass coverslips that had been washed in 2 M NaOH for at least 4 hr, rinsed with 70% ethanol, UV-sterilized, and treated with laminin (0.05 mg/mL, Sigma-Aldrich, L2020-1MG) for 1 hr prior to plating. Cells were then incubated at 37°C in 5% CO2. Cells were used for electrophysiology experiments 14–36 hr post-plating.
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