The largest database of trusted experimental protocols

5 protocols using nf κb p65 primary antibody

1

Kidney Histopathological Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The kidneys were rapidly removed from each mouse. The tissues were immediately fixed in 4% paraformaldehyde and embedded in paraffin. Serial (4 μm thick) sections were deparaffinized in xylene, rehydrated using descending grades of ethanol, and stained with hematoxylin and eosin (H&E) and periodic acid-Schiff (PAS). Immunohistochemical staining was performed using an anti-nuclear factor kappa-B (NF-κB) p65 primary antibody (Santa Cruz Biotechnology, Dallas, TX, USA), followed by incubation with horseradish peroxidase-conjugated anti-rabbit IgG secondary antibody (Santa Cruz Biotechnology). Images were captured using an Olympus BX53 microscope (Tokyo, Japan). Tubular damage in PAS-stained kidney sections was scored according to the level of cortical tubular injury as previously described: 0, normal; 1, 1–10%; 2, 11–25%; 3, 26–45%; 4, 46–75%; and 5, 76–100% [12 (link)]. The number of NF-κB-activated cells in each section was determined by counting the number of cells showing nuclear p65-positive staining in 10 fields per slide (×200).
+ Open protocol
+ Expand
2

Quantifying NF-κB p65 Protein Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total proteins were purchased from pancreatic tissue using a total protein extraction kit (Boster, Wuhan, China). Protein concentrations were determined using a commercial kit (Pierce, Rockford, IL, USA). Each 20-μg aliquot of total protein was loaded onto sodium dodecyl sulfate-polyacrylamide gel for electrophoresis and then transferred onto membranes. Following complete protein transfer, the membranes were blocked with 5% milk powder solution for 2 h and incubated with NF-κB p65 primary antibody (Santa Cruz Biotechnology, Inc., Dallas, TX, USA) overnight. After washing the membranes, the secondary antibody (Boster, Wuhan, China) was applied and incubated for 2 h at room temperature (RT). Bands were quantified by a calibrated imaging densitometer (GS-710; Bio-Rad) and analyzed by “Quantity One” software (Bio-Rad). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as an internal reference.
+ Open protocol
+ Expand
3

Naringin Modulates NF-κB p65 in Rat Retina

Check if the same lab product or an alternative is used in the 5 most similar protocols
IHC assay was performed to detect the effects of naringin on expression of NF-κB p65 in rat retinal tissues. Sample sections (5 μm) were deparaffinized with xylene and rehydrated with ethanol. Antigen retrieval was performed with sodium citrate buffer in a microwave for 10 min. The sections were added with 3 % H2O2 for 15 min at room temperature (RT). Thereafter, the sections were blocked with goat serum (Solarbio) for 15 min at RT. After serum deprivation, the sections were incubated with NF-κB p65 primary antibody (1:50; Santa cruz, Santa Cruz, CA, USA) at 4 °C overnight and then with a Biotin-labeled Goat Anti-Rabbit IgG(H+L) secondary antibody (1:200; Beyotime, Beijing, China) at 37 °C for 30 min. Then the sections were incubated with HRP-labeled streptavidin (Beyotime) at 37 °C for 30 min and color was developed using DAB (Solarbio). The sections were counterstained with hematoxylin (Solarbio). The positive staining was visualized using a microscope (Olympus).
+ Open protocol
+ Expand
4

Immunofluorescence Analysis of Retinal GFAP and NF-κB

Check if the same lab product or an alternative is used in the 5 most similar protocols
IF was carried out to analyze glial fibrillary acidic protein (GFAP) expression in rat retinal tissues and the distribution of NF-κB p65 in rMC1 cells. The retinal sections embedded in paraffin were deparaffinized before antigen retrieval. The rMC1 cells seeded on glass cover slips were treated with 4% paraformaldehyde for 15 min and then permeabilized with 0.1% tritonX-100 for 30 min. The tissue sections or cell slides were blocked with goat serum (Solarbio) and incubated with GFAP primary antibody (1:100; Santa cruz) or NF-κB p65 primary antibody (1:200; Santa cruz) at 4 °C overnight. The secondary antibody Cy3-labeled Goat Anti-Mouse IgG(H+L) (1:500 for tissue sections or 1:50 for cell slides; Beyotime) was applied for 60 min at RT. The nucleus was stained with DAPI (Biosharp, Beijing, China). The images were captured by a fluorescence microscope (Olympus).
+ Open protocol
+ Expand
5

NF-κB Signaling Pathway Activation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells at a concentration of 2 × 105 cells/mL in 2 mL of medium were plated in a 6-well plate with a 0.17 mm coverslip. Cells were pre-treated with AGS 50 μg/mL for 1 h. To activate the NF-κB signaling pathway, LPS (1 μg/mL) was added to cells and incubated for 30 min. Cells were fixed in 4% paraformaldehyde, and the cell membrane was destroyed by 0.5% Triton X-100 to allow antibodies to enter the nucleus. Antibodies were then blocked with 5% BSA containing 0.1% Triton X-100. Cells were incubated overnight at 4 °C with an NF-κB p65 primary antibody (Santa Cruz Biotechnology, Delaware Ave, Dallas, CA, USA) and 1% BSA (1:200). Cells were incubated with a secondary antibody (Santa Cruz Biotechnology, Delaware Ave, Dallas, CA, USA) and 1% BSA (1:1000) at room temperature in the dark for 2 h. Finally, cell nuclear staining and mounting were conducted using histology mounting medium with DAPI (Sigma-Aldrich, St. Louis, MO, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!